RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 PLAC8Q9NZF1 115 aa10.62□□□□□ -0.71
KDM1A-201ENST00000356634 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.61□□□□□ -0.71
KDM1A-201ENST00000356634 PRKDCP78527 4128 aaKnown RBP10.58□□□□□ -0.72
KDM1A-201ENST00000356634 MEGF8Q7Z7M0 2845 aa10.57□□□□□ -0.72
KDM1A-201ENST00000356634 Q5W150 140 aa10.56□□□□□ -0.72
KDM1A-201ENST00000356634 KMT2AQ03164 3969 aa10.55□□□□□ -0.72
KDM1A-201ENST00000356634 STARD9Q9P2P6 4700 aa10.55□□□□□ -0.72
KDM1A-201ENST00000356634 WWC2-AS2Q96NR7 200 aa10.55□□□□□ -0.72
KDM1A-201ENST00000356634 APLNQ9ULZ1 77 aa10.55□□□□□ -0.72
KDM1A-201ENST00000356634 DNHD1Q96M86 4753 aa10.53□□□□□ -0.72
KDM1A-201ENST00000356634 RETNLBQ9BQ08 111 aa10.52□□□□□ -0.72
KDM1A-201ENST00000356634 ZNF706Q9Y5V0 76 aaPredicted RBP10.52□□□□□ -0.72
KDM1A-201ENST00000356634 FRAS1Q86XX4 4008 aa10.51□□□□□ -0.73
KDM1A-201ENST00000356634 PSORS1C2Q9UIG4 136 aa10.51□□□□□ -0.73
KDM1A-201ENST00000356634 NBDYA0A0U1RRE5 68 aa10.5□□□□□ -0.73
KDM1A-201ENST00000356634 LINC00483Q53H64 154 aa10.5□□□□□ -0.73
KDM1A-201ENST00000356634 SPACA4Q8TDM5 124 aa10.5□□□□□ -0.73
KDM1A-201ENST00000356634 CIRBP-AS1Q8TBR5 109 aa10.5□□□□□ -0.73
KDM1A-201ENST00000356634 ACYP2P14621 99 aa10.49□□□□□ -0.73
KDM1A-201ENST00000356634 PRAC1Q96KF2 57 aa10.48□□□□□ -0.73
KDM1A-201ENST00000356634 FBN3Q75N90 2809 aa10.48□□□□□ -0.73
KDM1A-201ENST00000356634 LINC00313P59037 77 aa10.45□□□□□ -0.74
KDM1A-201ENST00000356634 IGLV5-52A0A0A0MRZ9 124 aa10.42□□□□□ -0.74
KDM1A-201ENST00000356634 A0A1B0GU69 56 aa10.42□□□□□ -0.74
KDM1A-201ENST00000356634 ZNF861PO60384 105 aa10.42□□□□□ -0.74
KDM1A-201ENST00000356634 Q6ZRN7 208 aaPredicted RBP10.41□□□□□ -0.74
KDM1A-201ENST00000356634 ADM2Q7Z4H4 148 aa10.4□□□□□ -0.74
KDM1A-201ENST00000356634 KRTAP13-3Q3SY46 172 aa10.36□□□□□ -0.75
KDM1A-201ENST00000356634 RTL8CO15255 209 aa10.36□□□□□ -0.75
KDM1A-201ENST00000356634 A0A087WTM6 91 aa10.35□□□□□ -0.75
KDM1A-201ENST00000356634 DMAC1Q96GE9 116 aa10.33□□□□□ -0.76
KDM1A-201ENST00000356634 DNAH2Q9P225 4427 aa10.31□□□□□ -0.76
KDM1A-201ENST00000356634 VPS13DQ5THJ4 4388 aa10.3□□□□□ -0.76
KDM1A-201ENST00000356634 DNAH6Q9C0G6 4158 aa10.28□□□□□ -0.76
KDM1A-201ENST00000356634 DNAH8Q96JB1 4490 aa10.27□□□□□ -0.76
KDM1A-201ENST00000356634 C8orf87E5RJ46 101 aa10.27□□□□□ -0.77
KDM1A-201ENST00000356634 FAM229AH3BQW9 127 aa10.27□□□□□ -0.77
KDM1A-201ENST00000356634 MIR22HGQ0VDD5 57 aa10.26□□□□□ -0.77
KDM1A-201ENST00000356634 IGKV2D-30A0A075B6S6 120 aa10.25□□□□□ -0.77
KDM1A-201ENST00000356634 IGKV2-30P06310 120 aa10.25□□□□□ -0.77
KDM1A-201ENST00000356634 NUPR2A6NF83 97 aa10.25□□□□□ -0.77
KDM1A-201ENST00000356634 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
KDM1A-201ENST00000356634 IGLV7-43P04211 117 aa10.24□□□□□ -0.77
KDM1A-201ENST00000356634 UQCR11O14957 56 aa10.23□□□□□ -0.77
KDM1A-201ENST00000356634 SPATA8Q6RVD6 105 aa10.21□□□□□ -0.78
KDM1A-201ENST00000356634 DNAH17Q9UFH2 4485 aa10.21□□□□□ -0.78
KDM1A-201ENST00000356634 PLA2G1BP04054 148 aaKnown RBP10.2□□□□□ -0.78
KDM1A-201ENST00000356634 LY6G6CO95867 125 aa10.2□□□□□ -0.78
KDM1A-201ENST00000356634 ALMS1Q8TCU4 4167 aa10.18□□□□□ -0.78
KDM1A-201ENST00000356634 SPINK1P00995 79 aa10.18□□□□□ -0.78
KDM1A-201ENST00000356634 LINC01554Q52M75 96 aa10.17□□□□□ -0.78
KDM1A-201ENST00000356634 SSBP3-AS1Q7Z2R9 100 aa10.16□□□□□ -0.78
KDM1A-201ENST00000356634 DNAH11Q96DT5 4516 aa10.16□□□□□ -0.78
KDM1A-201ENST00000356634 DYNC2H1Q8NCM8 4307 aaKnown RBP10.14□□□□□ -0.79
KDM1A-201ENST00000356634 HYDINQ4G0P3 5121 aa10.09□□□□□ -0.79
KDM1A-201ENST00000356634 CSAG1Q6PB30 78 aa10.08□□□□□ -0.8
KDM1A-201ENST00000356634 Q8N1X5 172 aa10.04□□□□□ -0.8
KDM1A-201ENST00000356634 KRTAP13-2Q52LG2 175 aa10.03□□□□□ -0.8
KDM1A-201ENST00000356634 C1orf134Q5TEV5 83 aa10.03□□□□□ -0.8
KDM1A-201ENST00000356634 KRTAP10-2P60368 255 aa10.02□□□□□ -0.81
KDM1A-201ENST00000356634 KRTAP16-1A8MUX0 517 aa10.01□□□□□ -0.81
KDM1A-201ENST00000356634 LRP1BQ9NZR2 4599 aa10.01□□□□□ -0.81
KDM1A-201ENST00000356634 C4orf48Q5BLP8 95 aa10□□□□□ -0.81
KDM1A-201ENST00000356634 DNAH5Q8TE73 4624 aa9.96□□□□□ -0.82
KDM1A-201ENST00000356634 FAT2Q9NYQ8 4349 aa9.9□□□□□ -0.82
KDM1A-201ENST00000356634 PKHD1P08F94 4074 aa9.9□□□□□ -0.82
KDM1A-201ENST00000356634 H3BS24 57 aa9.86□□□□□ -0.83
KDM1A-201ENST00000356634 VPS13BQ7Z7G8 4022 aa9.85□□□□□ -0.83
KDM1A-201ENST00000356634 FLG2Q5D862 2391 aaPredicted RBP9.84□□□□□ -0.83
KDM1A-201ENST00000356634 TYMSOSQ8TAI1 123 aa9.82□□□□□ -0.84
KDM1A-201ENST00000356634 KRTAP10-1P60331 282 aa9.82□□□□□ -0.84
KDM1A-201ENST00000356634 Q6ZSA8 131 aa9.8□□□□□ -0.84
KDM1A-201ENST00000356634 KRTAP1-4P0C5Y4 121 aa9.79□□□□□ -0.84
KDM1A-201ENST00000356634 H0YAA0 97 aa9.78□□□□□ -0.84
KDM1A-201ENST00000356634 FAT1Q14517 4588 aa9.73□□□□□ -0.85
KDM1A-201ENST00000356634 SMR3BP02814 79 aaPredicted RBP9.72□□□□□ -0.85
KDM1A-201ENST00000356634 A0A1B0GU33 70 aa9.72□□□□□ -0.85
KDM1A-201ENST00000356634 C9orf92A6NGG3 77 aa9.71□□□□□ -0.85
KDM1A-201ENST00000356634 A8MUU9 505 aa9.71□□□□□ -0.85
KDM1A-201ENST00000356634 PKD1P98161 4303 aa9.71□□□□□ -0.86
KDM1A-201ENST00000356634 LINC00304Q8N9R0 145 aa9.7□□□□□ -0.86
KDM1A-201ENST00000356634 CRIPTQ9P021 101 aa9.69□□□□□ -0.86
KDM1A-201ENST00000356634 KRTAP25-1Q3LHN0 102 aa9.65□□□□□ -0.86
KDM1A-201ENST00000356634 H1FX-AS1Q4G0G2 97 aa9.61□□□□□ -0.87
KDM1A-201ENST00000356634 KRTAP3-1Q9BYR8 98 aa9.56□□□□□ -0.88
KDM1A-201ENST00000356634 SACSQ9NZJ4 4579 aa9.56□□□□□ -0.88
KDM1A-201ENST00000356634 K7ERS5 55 aa9.56□□□□□ -0.88
KDM1A-201ENST00000356634 KMT2CQ8NEZ4 4911 aaKnown RBP9.53□□□□□ -0.88
KDM1A-201ENST00000356634 DMBT1Q9UGM3 2413 aaPredicted RBP9.53□□□□□ -0.88
KDM1A-201ENST00000356634 ROMO1P60602 79 aa9.53□□□□□ -0.88
KDM1A-201ENST00000356634 DYNC1H1Q14204 4646 aaKnown RBP9.5□□□□□ -0.89
KDM1A-201ENST00000356634 COX6B2Q6YFQ2 88 aa9.46□□□□□ -0.9
KDM1A-201ENST00000356634 C20orf166-AS1Q96NR2 134 aa9.44□□□□□ -0.9
KDM1A-201ENST00000356634 MYCBP2O75592 4640 aa9.39□□□□□ -0.91
KDM1A-201ENST00000356634 A0A0D9SG42 100 aa9.38□□□□□ -0.91
KDM1A-201ENST00000356634 RPS29P62273 56 aaKnown RBP9.38□□□□□ -0.91
KDM1A-201ENST00000356634 LRP1Q07954 4544 aaKnown RBP9.38□□□□□ -0.91
KDM1A-201ENST00000356634 APOBP04114 4563 aaKnown RBP9.33□□□□□ -0.92
KDM1A-201ENST00000356634 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
KDM1A-201ENST00000356634 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms