RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 DNAH14Q0VDD8 3507 aa3.25□□□□□ -1.89
SRGAP1-201ENST00000355086 A6NN06 94 aa3.25□□□□□ -1.89
SRGAP1-201ENST00000355086 CFAP47Q6ZTR5 3102 aa3.25□□□□□ -1.89
SRGAP1-201ENST00000355086 BOD1L1Q8NFC6 3051 aa3.24□□□□□ -1.89
SRGAP1-201ENST00000355086 LRBAP50851 2863 aa3.22□□□□□ -1.89
SRGAP1-201ENST00000355086 CELSR2Q9HCU4 2923 aa3.22□□□□□ -1.89
SRGAP1-201ENST00000355086 HIVEP1P15822 2718 aa3.22□□□□□ -1.89
SRGAP1-201ENST00000355086 KRTAP10-8P60410 259 aa3.21□□□□□ -1.89
SRGAP1-201ENST00000355086 KRTAP11-1Q8IUC1 163 aa3.21□□□□□ -1.9
SRGAP1-201ENST00000355086 KRTAP13-2Q52LG2 175 aa3.19□□□□□ -1.9
SRGAP1-201ENST00000355086 PP632Q6XCG6 107 aa3.19□□□□□ -1.9
SRGAP1-201ENST00000355086 ATMQ13315 3056 aa3.19□□□□□ -1.9
SRGAP1-201ENST00000355086 Q6ZRN7 208 aaPredicted RBP3.19□□□□□ -1.9
SRGAP1-201ENST00000355086 TENM4Q6N022 2769 aa3.19□□□□□ -1.9
SRGAP1-201ENST00000355086 NF1P21359 2839 aa3.18□□□□□ -1.9
SRGAP1-201ENST00000355086 SPEGQ15772 3267 aa3.17□□□□□ -1.9
SRGAP1-201ENST00000355086 COL6A3P12111 3177 aa3.17□□□□□ -1.9
SRGAP1-201ENST00000355086 TENM1Q9UKZ4 2725 aa3.17□□□□□ -1.9
SRGAP1-201ENST00000355086 ZZEF1O43149 2961 aa3.17□□□□□ -1.9
SRGAP1-201ENST00000355086 TENM3Q9P273 2699 aa3.16□□□□□ -1.9
SRGAP1-201ENST00000355086 CDH23Q9H251 3354 aa3.16□□□□□ -1.9
SRGAP1-201ENST00000355086 ADGRG4Q8IZF6 3080 aa3.16□□□□□ -1.9
SRGAP1-201ENST00000355086 A0A1B0GVY2 172 aa3.15□□□□□ -1.91
SRGAP1-201ENST00000355086 DCHS2Q6V1P9 2916 aa3.14□□□□□ -1.91
SRGAP1-201ENST00000355086 USP34Q70CQ2 3546 aa3.13□□□□□ -1.91
SRGAP1-201ENST00000355086 NBEAQ8NFP9 2946 aa3.13□□□□□ -1.91
SRGAP1-201ENST00000355086 KRTAP13-1Q8IUC0 172 aa3.13□□□□□ -1.91
SRGAP1-201ENST00000355086 KRTAP7-1Q8IUC3 87 aa3.13□□□□□ -1.91
SRGAP1-201ENST00000355086 PDZD2O15018 2839 aa3.13□□□□□ -1.91
SRGAP1-201ENST00000355086 PRO2289Q9P1D8 64 aa3.12□□□□□ -1.91
SRGAP1-201ENST00000355086 SZT2Q5T011 3432 aa3.12□□□□□ -1.91
SRGAP1-201ENST00000355086 P0C880 135 aa3.12□□□□□ -1.91
SRGAP1-201ENST00000355086 NIPBLQ6KC79 2804 aaeCLIP3.11□□□□□ -1.91
SRGAP1-201ENST00000355086 KRTAP10-10P60014 251 aa3.1□□□□□ -1.91
SRGAP1-201ENST00000355086 DMXL1Q9Y485 3027 aa3.09□□□□□ -1.91
SRGAP1-201ENST00000355086 CELSR1Q9NYQ6 3014 aa3.09□□□□□ -1.92
SRGAP1-201ENST00000355086 TNRC18O15417 2968 aaPredicted RBP3.09□□□□□ -1.92
SRGAP1-201ENST00000355086 SPTBN5Q9NRC6 3674 aaKnown RBP3.08□□□□□ -1.92
SRGAP1-201ENST00000355086 XP32Q5T750 250 aa3.06□□□□□ -1.92
SRGAP1-201ENST00000355086 PKD1L1Q8TDX9 2849 aa3.06□□□□□ -1.92
SRGAP1-201ENST00000355086 H0YAA0 97 aa3.05□□□□□ -1.92
SRGAP1-201ENST00000355086 EYSQ5T1H1 3165 aa3.05□□□□□ -1.92
SRGAP1-201ENST00000355086 NBPF19A0A087WUL8 3843 aa3.04□□□□□ -1.92
SRGAP1-201ENST00000355086 TGP01266 2768 aa3.04□□□□□ -1.92
SRGAP1-201ENST00000355086 TPRXLQ17RH7 258 aa3.03□□□□□ -1.92
SRGAP1-201ENST00000355086 MYO15AQ9UKN7 3530 aa3.02□□□□□ -1.93
SRGAP1-201ENST00000355086 KRTAP21-3Q3LHN1 58 aa3.02□□□□□ -1.93
SRGAP1-201ENST00000355086 VWFP04275 2813 aa3.01□□□□□ -1.93
SRGAP1-201ENST00000355086 FBN2P35556 2912 aa2.98□□□□□ -1.93
SRGAP1-201ENST00000355086 KRTAP1-4P0C5Y4 121 aa2.98□□□□□ -1.93
SRGAP1-201ENST00000355086 ZANQ9Y493 2812 aa2.98□□□□□ -1.93
SRGAP1-201ENST00000355086 ZFHX4Q86UP3 3567 aa2.97□□□□□ -1.93
SRGAP1-201ENST00000355086 ASPMQ8IZT6 3477 aa2.97□□□□□ -1.93
SRGAP1-201ENST00000355086 ZFHX3Q15911 3703 aa2.97□□□□□ -1.93
SRGAP1-201ENST00000355086 TENM2Q9NT68 2774 aa2.97□□□□□ -1.93
SRGAP1-201ENST00000355086 LOC400499M0QZD8 3231 aa2.97□□□□□ -1.93
SRGAP1-201ENST00000355086 SRRM2Q9UQ35 2752 aaKnown RBP2.94□□□□□ -1.94
SRGAP1-201ENST00000355086 WDFY3Q8IZQ1 3526 aa2.94□□□□□ -1.94
SRGAP1-201ENST00000355086 KRTAP13-3Q3SY46 172 aa2.93□□□□□ -1.94
SRGAP1-201ENST00000355086 LAMA5O15230 3695 aa2.92□□□□□ -1.94
SRGAP1-201ENST00000355086 KRTAP12-2P59991 146 aa2.89□□□□□ -1.95
SRGAP1-201ENST00000355086 KRTAP13-4Q3LI77 160 aa2.87□□□□□ -1.95
SRGAP1-201ENST00000355086 KRTAP15-1Q3LI76 137 aa2.86□□□□□ -1.95
SRGAP1-201ENST00000355086 DCHS1Q96JQ0 3298 aa2.86□□□□□ -1.95
SRGAP1-201ENST00000355086 COL7A1Q02388 2944 aa2.85□□□□□ -1.95
SRGAP1-201ENST00000355086 RELNP78509 3460 aa2.83□□□□□ -1.96
SRGAP1-201ENST00000355086 SMG1Q96Q15 3661 aaKnown RBP2.83□□□□□ -1.96
SRGAP1-201ENST00000355086 MXRA5Q9NR99 2828 aa2.82□□□□□ -1.96
SRGAP1-201ENST00000355086 CSMD1Q96PZ7 3565 aa2.8□□□□□ -1.96
SRGAP1-201ENST00000355086 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
SRGAP1-201ENST00000355086 SPENQ96T58 3664 aaKnown RBP2.79□□□□□ -1.96
SRGAP1-201ENST00000355086 DMDP11532 3685 aa2.79□□□□□ -1.96
SRGAP1-201ENST00000355086 MEGF8Q7Z7M0 2845 aa2.78□□□□□ -1.97
SRGAP1-201ENST00000355086 HRNRQ86YZ3 2850 aaPredicted RBP2.78□□□□□ -1.97
SRGAP1-201ENST00000355086 FBN3Q75N90 2809 aa2.77□□□□□ -1.97
SRGAP1-201ENST00000355086 TRRAPQ9Y4A5 3859 aa2.76□□□□□ -1.97
SRGAP1-201ENST00000355086 CUBNO60494 3623 aa2.75□□□□□ -1.97
SRGAP1-201ENST00000355086 FBN1P35555 2871 aaKnown RBP2.74□□□□□ -1.97
SRGAP1-201ENST00000355086 CRCT1Q9UGL9 99 aa2.74□□□□□ -1.97
SRGAP1-201ENST00000355086 SVEP1Q4LDE5 3571 aa2.72□□□□□ -1.97
SRGAP1-201ENST00000355086 INE1O15225 51 aa2.71□□□□□ -1.98
SRGAP1-201ENST00000355086 CSMD3Q7Z407 3707 aa2.7□□□□□ -1.98
SRGAP1-201ENST00000355086 VPS13CQ709C8 3753 aa2.67□□□□□ -1.98
SRGAP1-201ENST00000355086 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
SRGAP1-201ENST00000355086 KRTAP3-1Q9BYR8 98 aa2.66□□□□□ -1.98
SRGAP1-201ENST00000355086 KRTAP10-6P60371 365 aaPredicted RBP2.62□□□□□ -1.99
SRGAP1-201ENST00000355086 OTOGQ6ZRI0 2925 aa2.6□□□□□ -1.99
SRGAP1-201ENST00000355086 MUC3AQ02505 3323 aa2.6□□□□□ -1.99
SRGAP1-201ENST00000355086 ANK3Q12955 4377 aaKnown RBP2.58□□□□□ -2
SRGAP1-201ENST00000355086 CSMD2Q7Z408 3487 aa2.57□□□□□ -2
SRGAP1-201ENST00000355086 KRTAP12-3P60328 96 aa2.55□□□□□ -2
SRGAP1-201ENST00000355086 AKAP9Q99996 3911 aa2.54□□□□□ -2
SRGAP1-201ENST00000355086 KRTAP10-5P60370 271 aa2.52□□□□□ -2.01
SRGAP1-201ENST00000355086 HUWE1Q7Z6Z7 4374 aaKnown RBP2.51□□□□□ -2.01
SRGAP1-201ENST00000355086 LCE3AQ5TA76 89 aa2.5□□□□□ -2.01
SRGAP1-201ENST00000355086 KRTAP23-1A1A580 65 aa2.49□□□□□ -2.01
SRGAP1-201ENST00000355086 KRTAP3-2Q9BYR7 98 aa2.49□□□□□ -2.01
SRGAP1-201ENST00000355086 MT1HL1P0DM35 61 aa2.48□□□□□ -2.01
SRGAP1-201ENST00000355086 BSNQ9UPA5 3926 aa2.48□□□□□ -2.01
SRGAP1-201ENST00000355086 KRTAP3-3Q9BYR6 98 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms