RNA–Protein interactions for RNA: ENST00000354785.8

FN1-203, Transcript of fibronectin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FN1, Length 8,905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-203ENST00000354785 KRTAP26-1Q6PEX3 210 aa6.64□□□□□ -1.35
FN1-203ENST00000354785 A0A1B0GU33 70 aa6.63□□□□□ -1.35
FN1-203ENST00000354785 ZCCHC13Q8WW36 166 aaKnown RBP6.62□□□□□ -1.35
FN1-203ENST00000354785 CYSTM1Q9H1C7 97 aa6.62□□□□□ -1.35
FN1-203ENST00000354785 CSMD2Q7Z408 3487 aa6.61□□□□□ -1.35
FN1-203ENST00000354785 Q75L30 129 aa6.6□□□□□ -1.35
FN1-203ENST00000354785 SPRR1BP22528 89 aa6.59□□□□□ -1.35
FN1-203ENST00000354785 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
FN1-203ENST00000354785 M0R2T5 61 aa6.59□□□□□ -1.35
FN1-203ENST00000354785 LCA10Q71F78 164 aa6.59□□□□□ -1.35
FN1-203ENST00000354785 SRRM2Q9UQ35 2752 aaKnown RBP6.59□□□□□ -1.35
FN1-203ENST00000354785 Q5W150 140 aa6.58□□□□□ -1.36
FN1-203ENST00000354785 TENM2Q9NT68 2774 aa6.58□□□□□ -1.36
FN1-203ENST00000354785 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
FN1-203ENST00000354785 COL7A1Q02388 2944 aa6.57□□□□□ -1.36
FN1-203ENST00000354785 S4R3F8 94 aa6.56□□□□□ -1.36
FN1-203ENST00000354785 TRRAPQ9Y4A5 3859 aa6.56□□□□□ -1.36
FN1-203ENST00000354785 KRTAP10-1P60331 282 aa6.55□□□□□ -1.36
FN1-203ENST00000354785 CAMK2N1Q7Z7J9 78 aa6.54□□□□□ -1.36
FN1-203ENST00000354785 Q5VSD8 79 aa6.54□□□□□ -1.36
FN1-203ENST00000354785 SPINK7P58062 85 aa6.53□□□□□ -1.36
FN1-203ENST00000354785 LINC00483Q53H64 154 aa6.53□□□□□ -1.36
FN1-203ENST00000354785 KRTAP4-16G5E9R7 235 aaPredicted RBP6.52□□□□□ -1.37
FN1-203ENST00000354785 FP248Q71RG6 208 aaPredicted RBP6.52□□□□□ -1.37
FN1-203ENST00000354785 CSAG1Q6PB30 78 aa6.51□□□□□ -1.37
FN1-203ENST00000354785 PANO1I0J062 215 aa6.5□□□□□ -1.37
FN1-203ENST00000354785 LUZP6Q538Z0 58 aa6.5□□□□□ -1.37
FN1-203ENST00000354785 Q5XG85 94 aa6.5□□□□□ -1.37
FN1-203ENST00000354785 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
FN1-203ENST00000354785 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
FN1-203ENST00000354785 LCE6AA0A183 80 aa6.48□□□□□ -1.37
FN1-203ENST00000354785 Q5VV11 94 aa6.47□□□□□ -1.37
FN1-203ENST00000354785 A0A087X002 238 aa6.45□□□□□ -1.38
FN1-203ENST00000354785 R4GN34 69 aa6.44□□□□□ -1.38
FN1-203ENST00000354785 SEC61BP60468 96 aaKnown RBP6.44□□□□□ -1.38
FN1-203ENST00000354785 Q6ZR54 194 aa6.44□□□□□ -1.38
FN1-203ENST00000354785 OTOGQ6ZRI0 2925 aa6.42□□□□□ -1.38
FN1-203ENST00000354785 KRTAP11-1Q8IUC1 163 aa6.36□□□□□ -1.39
FN1-203ENST00000354785 OXTP01178 125 aa6.36□□□□□ -1.39
FN1-203ENST00000354785 KRTAP29-1A8MX34 341 aaPredicted RBP6.35□□□□□ -1.39
FN1-203ENST00000354785 Q6ZRN7 208 aaPredicted RBP6.34□□□□□ -1.39
FN1-203ENST00000354785 PRAC1Q96KF2 57 aa6.33□□□□□ -1.4
FN1-203ENST00000354785 NOTCH2NLQ7Z3S9 236 aa6.32□□□□□ -1.4
FN1-203ENST00000354785 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
FN1-203ENST00000354785 FBN3Q75N90 2809 aa6.29□□□□□ -1.4
FN1-203ENST00000354785 M0QZ58 72 aa6.29□□□□□ -1.4
FN1-203ENST00000354785 ZNF469Q96JG9 3925 aaPredicted RBP6.29□□□□□ -1.4
FN1-203ENST00000354785 H1FX-AS1Q4G0G2 97 aa6.29□□□□□ -1.4
FN1-203ENST00000354785 ASB16-AS1Q495Z4 193 aa6.29□□□□□ -1.4
FN1-203ENST00000354785 MEGF8Q7Z7M0 2845 aa6.28□□□□□ -1.4
FN1-203ENST00000354785 KRTAP7-1Q8IUC3 87 aa6.28□□□□□ -1.4
FN1-203ENST00000354785 AKAP9Q99996 3911 aa6.27□□□□□ -1.41
FN1-203ENST00000354785 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
FN1-203ENST00000354785 ROMO1P60602 79 aa6.26□□□□□ -1.41
FN1-203ENST00000354785 CSMD3Q7Z407 3707 aa6.26□□□□□ -1.41
FN1-203ENST00000354785 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
FN1-203ENST00000354785 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
FN1-203ENST00000354785 KRTAP13-1Q8IUC0 172 aa6.2□□□□□ -1.42
FN1-203ENST00000354785 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
FN1-203ENST00000354785 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
FN1-203ENST00000354785 A8MUU9 505 aa6.1□□□□□ -1.43
FN1-203ENST00000354785 KRTAP21-3Q3LHN1 58 aa6.06□□□□□ -1.44
FN1-203ENST00000354785 H3BS24 57 aa6.06□□□□□ -1.44
FN1-203ENST00000354785 A0A0A0MQY5 61 aa6.04□□□□□ -1.44
FN1-203ENST00000354785 A8MU10 97 aa6.04□□□□□ -1.44
FN1-203ENST00000354785 C20orf166-AS1Q96NR2 134 aa6.01□□□□□ -1.45
FN1-203ENST00000354785 A6NN06 94 aa5.97□□□□□ -1.45
FN1-203ENST00000354785 KRTAP25-1Q3LHN0 102 aa5.94□□□□□ -1.46
FN1-203ENST00000354785 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
FN1-203ENST00000354785 XP32Q5T750 250 aa5.86□□□□□ -1.47
FN1-203ENST00000354785 TNP1P09430 55 aa5.81□□□□□ -1.48
FN1-203ENST00000354785 TPRXLQ17RH7 258 aa5.77□□□□□ -1.49
FN1-203ENST00000354785 H0YAA0 97 aa5.74□□□□□ -1.49
FN1-203ENST00000354785 NDUFAF8A1L188 74 aa5.73□□□□□ -1.49
FN1-203ENST00000354785 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
FN1-203ENST00000354785 A0A1B0GVY2 172 aa5.7□□□□□ -1.5
FN1-203ENST00000354785 KRTAP10-8P60410 259 aa5.7□□□□□ -1.5
FN1-203ENST00000354785 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
FN1-203ENST00000354785 ANK3Q12955 4377 aaKnown RBP5.69□□□□□ -1.5
FN1-203ENST00000354785 KRTAP13-3Q3SY46 172 aa5.67□□□□□ -1.5
FN1-203ENST00000354785 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
FN1-203ENST00000354785 LYSTQ99698 3801 aa5.61□□□□□ -1.51
FN1-203ENST00000354785 P0C880 135 aa5.6□□□□□ -1.51
FN1-203ENST00000354785 KRTAP10-10P60014 251 aa5.59□□□□□ -1.51
FN1-203ENST00000354785 ANK2Q01484 3957 aa5.59□□□□□ -1.52
FN1-203ENST00000354785 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
FN1-203ENST00000354785 KMT2AQ03164 3969 aa5.48□□□□□ -1.53
FN1-203ENST00000354785 HUWE1Q7Z6Z7 4374 aaKnown RBP5.41□□□□□ -1.54
FN1-203ENST00000354785 CMYA5Q8N3K9 4069 aa5.4□□□□□ -1.54
FN1-203ENST00000354785 KRTAP12-2P59991 146 aa5.39□□□□□ -1.55
FN1-203ENST00000354785 FRAS1Q86XX4 4008 aa5.39□□□□□ -1.55
FN1-203ENST00000354785 HECTD4Q9Y4D8 3996 aa5.35□□□□□ -1.55
FN1-203ENST00000354785 VPS13BQ7Z7G8 4022 aa5.3□□□□□ -1.56
FN1-203ENST00000354785 KRTAP12-1P59990 96 aa5.28□□□□□ -1.56
FN1-203ENST00000354785 DNAH3Q8TD57 4116 aa5.27□□□□□ -1.57
FN1-203ENST00000354785 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
FN1-203ENST00000354785 DNAH7Q8WXX0 4024 aa5.26□□□□□ -1.57
FN1-203ENST00000354785 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
FN1-203ENST00000354785 PRKDCP78527 4128 aaKnown RBP5.24□□□□□ -1.57
FN1-203ENST00000354785 ALMS1Q8TCU4 4167 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms