RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 RELNP78509 3460 aa1.38□□□□□ -2.19
LRRC39-201ENST00000342895 CENPFP49454 3210 aa1.38□□□□□ -2.19
LRRC39-201ENST00000342895 KRTAP13-1Q8IUC0 172 aa1.37□□□□□ -2.19
LRRC39-201ENST00000342895 DEFB108BQ8NET1 73 aa1.37□□□□□ -2.19
LRRC39-201ENST00000342895 TTC28Q96AY4 2481 aa1.37□□□□□ -2.19
LRRC39-201ENST00000342895 ZZEF1O43149 2961 aa1.37□□□□□ -2.19
LRRC39-201ENST00000342895 CELSR3Q9NYQ7 3312 aa1.37□□□□□ -2.19
LRRC39-201ENST00000342895 BDP1A6H8Y1 2624 aa1.37□□□□□ -2.19
LRRC39-201ENST00000342895 HTN1P15515 57 aa1.37□□□□□ -2.19
LRRC39-201ENST00000342895 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
LRRC39-201ENST00000342895 MEGF8Q7Z7M0 2845 aa1.36□□□□□ -2.19
LRRC39-201ENST00000342895 DMBT1Q9UGM3 2413 aaPredicted RBP1.36□□□□□ -2.19
LRRC39-201ENST00000342895 MAP1BP46821 2468 aaKnown RBP1.36□□□□□ -2.19
LRRC39-201ENST00000342895 EP300Q09472 2414 aaPredicted RBP1.36□□□□□ -2.19
LRRC39-201ENST00000342895 COL6A5A8TX70 2615 aa1.36□□□□□ -2.19
LRRC39-201ENST00000342895 UTRNP46939 3433 aa1.36□□□□□ -2.19
LRRC39-201ENST00000342895 ZFHX4Q86UP3 3567 aa1.36□□□□□ -2.19
LRRC39-201ENST00000342895 DEFB103AP81534 67 aa1.35□□□□□ -2.19
LRRC39-201ENST00000342895 RIF1Q5UIP0 2472 aaKnown RBP1.35□□□□□ -2.19
LRRC39-201ENST00000342895 COL12A1Q99715 3063 aa1.35□□□□□ -2.19
LRRC39-201ENST00000342895 NBPF19A0A087WUL8 3843 aa1.35□□□□□ -2.19
LRRC39-201ENST00000342895 PDZD2O15018 2839 aa1.35□□□□□ -2.19
LRRC39-201ENST00000342895 A0A0D9SG42 100 aa1.35□□□□□ -2.19
LRRC39-201ENST00000342895 DMXL1Q9Y485 3027 aa1.34□□□□□ -2.19
LRRC39-201ENST00000342895 WDFY4Q6ZS81 3184 aa1.34□□□□□ -2.19
LRRC39-201ENST00000342895 KRTAP12-4P60329 112 aa1.34□□□□□ -2.19
LRRC39-201ENST00000342895 KALRNO60229 2985 aa1.34□□□□□ -2.2
LRRC39-201ENST00000342895 NBASA2RRP1 2371 aa1.34□□□□□ -2.2
LRRC39-201ENST00000342895 DMXL2Q8TDJ6 3036 aa1.33□□□□□ -2.2
LRRC39-201ENST00000342895 PCNTO95613 3336 aa1.33□□□□□ -2.2
LRRC39-201ENST00000342895 ATRQ13535 2644 aa1.33□□□□□ -2.2
LRRC39-201ENST00000342895 SPEGQ15772 3267 aa1.33□□□□□ -2.2
LRRC39-201ENST00000342895 H3BUX3 64 aa1.33□□□□□ -2.2
LRRC39-201ENST00000342895 NOP10Q9NPE3 64 aaKnown RBP1.33□□□□□ -2.2
LRRC39-201ENST00000342895 VPS13DQ5THJ4 4388 aa1.33□□□□□ -2.2
LRRC39-201ENST00000342895 USP9YO00507 2555 aaPredicted RBP1.32□□□□□ -2.2
LRRC39-201ENST00000342895 DNAH11Q96DT5 4516 aa1.31□□□□□ -2.2
LRRC39-201ENST00000342895 DEFB136Q30KP8 78 aa1.31□□□□□ -2.2
LRRC39-201ENST00000342895 EPG5Q9HCE0 2579 aa1.31□□□□□ -2.2
LRRC39-201ENST00000342895 DMDP11532 3685 aa1.31□□□□□ -2.2
LRRC39-201ENST00000342895 ITPR3Q14573 2671 aa1.31□□□□□ -2.2
LRRC39-201ENST00000342895 POLQO75417 2590 aa1.3□□□□□ -2.2
LRRC39-201ENST00000342895 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
LRRC39-201ENST00000342895 MUC3AQ02505 3323 aa1.3□□□□□ -2.2
LRRC39-201ENST00000342895 DCHS1Q96JQ0 3298 aa1.3□□□□□ -2.2
LRRC39-201ENST00000342895 APCP25054 2843 aa1.3□□□□□ -2.2
LRRC39-201ENST00000342895 LAMA2P24043 3122 aaKnown RBP1.29□□□□□ -2.2
LRRC39-201ENST00000342895 SPTBN5Q9NRC6 3674 aaKnown RBP1.29□□□□□ -2.2
LRRC39-201ENST00000342895 KRTAP12-3P60328 96 aa1.29□□□□□ -2.2
LRRC39-201ENST00000342895 HELZ2Q9BYK8 2649 aaKnown RBP1.29□□□□□ -2.2
LRRC39-201ENST00000342895 FAM186AA6NE01 2351 aa1.29□□□□□ -2.2
LRRC39-201ENST00000342895 KRTAP6-3Q3LI67 103 aa1.29□□□□□ -2.2
LRRC39-201ENST00000342895 USP24Q9UPU5 2620 aa1.28□□□□□ -2.2
LRRC39-201ENST00000342895 UTP20O75691 2785 aaKnown RBP1.28□□□□□ -2.2
LRRC39-201ENST00000342895 AKAP9Q99996 3911 aa1.28□□□□□ -2.2
LRRC39-201ENST00000342895 RP1L1Q8IWN7 2480 aaPredicted RBP1.28□□□□□ -2.2
LRRC39-201ENST00000342895 FREM2Q5SZK8 3169 aa1.28□□□□□ -2.2
LRRC39-201ENST00000342895 NCOR2Q9Y618 2525 aa1.27□□□□□ -2.21
LRRC39-201ENST00000342895 HIVEP3Q5T1R4 2406 aa1.27□□□□□ -2.21
LRRC39-201ENST00000342895 SPG11Q96JI7 2443 aa1.27□□□□□ -2.21
LRRC39-201ENST00000342895 FLNCQ14315 2725 aa1.27□□□□□ -2.21
LRRC39-201ENST00000342895 EP400Q96L91 3159 aa1.27□□□□□ -2.21
LRRC39-201ENST00000342895 LAMA1P25391 3075 aa1.27□□□□□ -2.21
LRRC39-201ENST00000342895 PIEZO1Q92508 2521 aa1.26□□□□□ -2.21
LRRC39-201ENST00000342895 BSNQ9UPA5 3926 aa1.26□□□□□ -2.21
LRRC39-201ENST00000342895 NIPBLQ6KC79 2804 aaeCLIP1.26□□□□□ -2.21
LRRC39-201ENST00000342895 SPENQ96T58 3664 aaKnown RBP1.26□□□□□ -2.21
LRRC39-201ENST00000342895 CD52P31358 61 aa1.26□□□□□ -2.21
LRRC39-201ENST00000342895 CRCT1Q9UGL9 99 aa1.26□□□□□ -2.21
LRRC39-201ENST00000342895 DNAH8Q96JB1 4490 aa1.26□□□□□ -2.21
LRRC39-201ENST00000342895 XIRP2A4UGR9 3374 aa1.25□□□□□ -2.21
LRRC39-201ENST00000342895 LRRK2Q5S007 2527 aa1.25□□□□□ -2.21
LRRC39-201ENST00000342895 SMG1Q96Q15 3661 aaKnown RBP1.25□□□□□ -2.21
LRRC39-201ENST00000342895 LAMA5O15230 3695 aa1.25□□□□□ -2.21
LRRC39-201ENST00000342895 SONP18583 2426 aaKnown RBP1.25□□□□□ -2.21
LRRC39-201ENST00000342895 CSMD3Q7Z407 3707 aa1.25□□□□□ -2.21
LRRC39-201ENST00000342895 COL7A1Q02388 2944 aa1.24□□□□□ -2.21
LRRC39-201ENST00000342895 A0A096LNI7 61 aa1.24□□□□□ -2.21
LRRC39-201ENST00000342895 M0QZ58 72 aa1.24□□□□□ -2.21
LRRC39-201ENST00000342895 MYCBP2O75592 4640 aa1.24□□□□□ -2.21
LRRC39-201ENST00000342895 NBEAL2Q6ZNJ1 2754 aa1.24□□□□□ -2.21
LRRC39-201ENST00000342895 PTPN13Q12923 2485 aa1.24□□□□□ -2.21
LRRC39-201ENST00000342895 ANKHD1Q8IWZ3 2542 aaKnown RBP1.24□□□□□ -2.21
LRRC39-201ENST00000342895 LAMA3Q16787 3333 aa1.24□□□□□ -2.21
LRRC39-201ENST00000342895 USP34Q70CQ2 3546 aa1.23□□□□□ -2.21
LRRC39-201ENST00000342895 LOC400499M0QZD8 3231 aa1.23□□□□□ -2.21
LRRC39-201ENST00000342895 TACC2O95359 2948 aa1.23□□□□□ -2.21
LRRC39-201ENST00000342895 CFAP46Q8IYW2 2715 aa1.22□□□□□ -2.21
LRRC39-201ENST00000342895 TEX15Q9BXT5 2789 aa1.22□□□□□ -2.21
LRRC39-201ENST00000342895 SPINK6Q6UWN8 80 aa1.22□□□□□ -2.21
LRRC39-201ENST00000342895 MXRA5Q9NR99 2828 aa1.22□□□□□ -2.21
LRRC39-201ENST00000342895 ASPMQ8IZT6 3477 aa1.22□□□□□ -2.21
LRRC39-201ENST00000342895 ITPR2Q14571 2701 aa1.21□□□□□ -2.22
LRRC39-201ENST00000342895 GCN1Q92616 2671 aaKnown RBP1.21□□□□□ -2.22
LRRC39-201ENST00000342895 A0A096LPF7 62 aa1.21□□□□□ -2.22
LRRC39-201ENST00000342895 ZANQ9Y493 2812 aa1.21□□□□□ -2.22
LRRC39-201ENST00000342895 LYSTQ99698 3801 aa1.21□□□□□ -2.22
LRRC39-201ENST00000342895 HIVEP1P15822 2718 aa1.2□□□□□ -2.22
LRRC39-201ENST00000342895 SETXQ7Z333 2677 aaKnown RBP1.2□□□□□ -2.22
LRRC39-201ENST00000342895 Q9Y3F1 56 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms