RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 DMAC1Q96GE9 116 aa11.8□□□□□ -0.52
SOX12-201ENST00000342665 A0A087X002 238 aa11.77□□□□□ -0.53
SOX12-201ENST00000342665 LCE6AA0A183 80 aa11.76□□□□□ -0.53
SOX12-201ENST00000342665 RELNP78509 3460 aa11.72□□□□□ -0.53
SOX12-201ENST00000342665 NOTCH2NLQ7Z3S9 236 aa11.72□□□□□ -0.53
SOX12-201ENST00000342665 DCHS1Q96JQ0 3298 aa11.72□□□□□ -0.53
SOX12-201ENST00000342665 ASB16-AS1Q495Z4 193 aa11.69□□□□□ -0.54
SOX12-201ENST00000342665 KRTAP13-1Q8IUC0 172 aa11.69□□□□□ -0.54
SOX12-201ENST00000342665 MXRA5Q9NR99 2828 aa11.68□□□□□ -0.54
SOX12-201ENST00000342665 ASPMQ8IZT6 3477 aa11.67□□□□□ -0.54
SOX12-201ENST00000342665 CSAG1Q6PB30 78 aa11.66□□□□□ -0.54
SOX12-201ENST00000342665 MUC3AQ02505 3323 aa11.63□□□□□ -0.55
SOX12-201ENST00000342665 S4R3F8 94 aa11.61□□□□□ -0.55
SOX12-201ENST00000342665 LAMA5O15230 3695 aa11.61□□□□□ -0.55
SOX12-201ENST00000342665 Q5VSD8 79 aa11.61□□□□□ -0.55
SOX12-201ENST00000342665 PRAC1Q96KF2 57 aa11.58□□□□□ -0.56
SOX12-201ENST00000342665 ZFHX4Q86UP3 3567 aa11.52□□□□□ -0.56
SOX12-201ENST00000342665 KRTAP13-2Q52LG2 175 aa11.48□□□□□ -0.57
SOX12-201ENST00000342665 RPS29P62273 56 aaKnown RBP11.48□□□□□ -0.57
SOX12-201ENST00000342665 CAMK2N1Q7Z7J9 78 aa11.47□□□□□ -0.57
SOX12-201ENST00000342665 DMDP11532 3685 aa11.43□□□□□ -0.58
SOX12-201ENST00000342665 SEC61BP60468 96 aaKnown RBP11.43□□□□□ -0.58
SOX12-201ENST00000342665 RPL37P61927 97 aaKnown RBP11.42□□□□□ -0.58
SOX12-201ENST00000342665 H1FX-AS1Q4G0G2 97 aa11.42□□□□□ -0.58
SOX12-201ENST00000342665 TENM3Q9P273 2699 aa11.38□□□□□ -0.59
SOX12-201ENST00000342665 R4GN34 69 aa11.37□□□□□ -0.59
SOX12-201ENST00000342665 CELSR1Q9NYQ6 3014 aa11.37□□□□□ -0.59
SOX12-201ENST00000342665 SPATA8Q6RVD6 105 aa11.36□□□□□ -0.59
SOX12-201ENST00000342665 LUZP6Q538Z0 58 aa11.27□□□□□ -0.61
SOX12-201ENST00000342665 TENM1Q9UKZ4 2725 aa11.26□□□□□ -0.61
SOX12-201ENST00000342665 M0R2T5 61 aa11.25□□□□□ -0.61
SOX12-201ENST00000342665 ROMO1P60602 79 aa11.25□□□□□ -0.61
SOX12-201ENST00000342665 CSMD1Q96PZ7 3565 aa11.19□□□□□ -0.62
SOX12-201ENST00000342665 A6NN06 94 aa11.18□□□□□ -0.62
SOX12-201ENST00000342665 SMG1Q96Q15 3661 aaKnown RBP11.17□□□□□ -0.62
SOX12-201ENST00000342665 M0QZ58 72 aa11.17□□□□□ -0.62
SOX12-201ENST00000342665 KRTAP21-3Q3LHN1 58 aa11.15□□□□□ -0.62
SOX12-201ENST00000342665 ADM2Q7Z4H4 148 aa11.15□□□□□ -0.62
SOX12-201ENST00000342665 A8MU10 97 aa11.11□□□□□ -0.63
SOX12-201ENST00000342665 PDZD2O15018 2839 aa11.1□□□□□ -0.63
SOX12-201ENST00000342665 A8MUU9 505 aa11.07□□□□□ -0.64
SOX12-201ENST00000342665 KRTAP1-4P0C5Y4 121 aa11.06□□□□□ -0.64
SOX12-201ENST00000342665 C20orf166-AS1Q96NR2 134 aa11.04□□□□□ -0.64
SOX12-201ENST00000342665 PKD1L1Q8TDX9 2849 aa11.03□□□□□ -0.64
SOX12-201ENST00000342665 FBN1P35555 2871 aaKnown RBP11.01□□□□□ -0.65
SOX12-201ENST00000342665 TENM2Q9NT68 2774 aa11□□□□□ -0.65
SOX12-201ENST00000342665 SVEP1Q4LDE5 3571 aa10.99□□□□□ -0.65
SOX12-201ENST00000342665 CUBNO60494 3623 aa10.98□□□□□ -0.65
SOX12-201ENST00000342665 VWFP04275 2813 aa10.97□□□□□ -0.65
SOX12-201ENST00000342665 TGP01266 2768 aa10.97□□□□□ -0.65
SOX12-201ENST00000342665 H3BS24 57 aa10.87□□□□□ -0.67
SOX12-201ENST00000342665 OTOGQ6ZRI0 2925 aa10.87□□□□□ -0.67
SOX12-201ENST00000342665 KRTAP25-1Q3LHN0 102 aa10.86□□□□□ -0.67
SOX12-201ENST00000342665 KRTAP16-1A8MUX0 517 aa10.79□□□□□ -0.68
SOX12-201ENST00000342665 PLAC4Q8WY50 150 aa10.72□□□□□ -0.69
SOX12-201ENST00000342665 NBPF19A0A087WUL8 3843 aa10.7□□□□□ -0.7
SOX12-201ENST00000342665 XP32Q5T750 250 aa10.68□□□□□ -0.7
SOX12-201ENST00000342665 ZFHX3Q15911 3703 aa10.68□□□□□ -0.7
SOX12-201ENST00000342665 A0A0A0MQY5 61 aa10.66□□□□□ -0.7
SOX12-201ENST00000342665 CSMD2Q7Z408 3487 aa10.65□□□□□ -0.7
SOX12-201ENST00000342665 SPENQ96T58 3664 aaKnown RBP10.64□□□□□ -0.71
SOX12-201ENST00000342665 KRTAP13-3Q3SY46 172 aa10.59□□□□□ -0.71
SOX12-201ENST00000342665 H0YAA0 97 aa10.53□□□□□ -0.72
SOX12-201ENST00000342665 TPRXLQ17RH7 258 aa10.46□□□□□ -0.73
SOX12-201ENST00000342665 SRRM2Q9UQ35 2752 aaKnown RBP10.44□□□□□ -0.74
SOX12-201ENST00000342665 FBN3Q75N90 2809 aa10.43□□□□□ -0.74
SOX12-201ENST00000342665 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
SOX12-201ENST00000342665 A0A1B0GVY2 172 aa10.35□□□□□ -0.75
SOX12-201ENST00000342665 TNP1P09430 55 aa10.35□□□□□ -0.75
SOX12-201ENST00000342665 NDUFAF8A1L188 74 aa10.3□□□□□ -0.76
SOX12-201ENST00000342665 BSNQ9UPA5 3926 aa10.28□□□□□ -0.76
SOX12-201ENST00000342665 P0C880 135 aa10.27□□□□□ -0.76
SOX12-201ENST00000342665 TRRAPQ9Y4A5 3859 aa10.26□□□□□ -0.77
SOX12-201ENST00000342665 C10orf95Q9H7T3 257 aa10.25□□□□□ -0.77
SOX12-201ENST00000342665 ANK3Q12955 4377 aaKnown RBP10.23□□□□□ -0.77
SOX12-201ENST00000342665 PP632Q6XCG6 107 aa10.19□□□□□ -0.78
SOX12-201ENST00000342665 MEGF8Q7Z7M0 2845 aa10.19□□□□□ -0.78
SOX12-201ENST00000342665 COL7A1Q02388 2944 aa10.12□□□□□ -0.79
SOX12-201ENST00000342665 KRTAP3-1Q9BYR8 98 aa10.01□□□□□ -0.81
SOX12-201ENST00000342665 VPS13CQ709C8 3753 aa9.94□□□□□ -0.82
SOX12-201ENST00000342665 KRTAP10-10P60014 251 aa9.86□□□□□ -0.83
SOX12-201ENST00000342665 KRTAP12-2P59991 146 aa9.83□□□□□ -0.84
SOX12-201ENST00000342665 KRTAP12-1P59990 96 aa9.76□□□□□ -0.85
SOX12-201ENST00000342665 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
SOX12-201ENST00000342665 ZNF469Q96JG9 3925 aaPredicted RBP9.64□□□□□ -0.87
SOX12-201ENST00000342665 KRTAP13-4Q3LI77 160 aa9.62□□□□□ -0.87
SOX12-201ENST00000342665 PRO2289Q9P1D8 64 aa9.61□□□□□ -0.87
SOX12-201ENST00000342665 MT1HL1P0DM35 61 aa9.57□□□□□ -0.88
SOX12-201ENST00000342665 KRTAP10-4P60372 401 aaPredicted RBP9.54□□□□□ -0.88
SOX12-201ENST00000342665 HUWE1Q7Z6Z7 4374 aaKnown RBP9.54□□□□□ -0.88
SOX12-201ENST00000342665 CSMD3Q7Z407 3707 aa9.52□□□□□ -0.88
SOX12-201ENST00000342665 KRTAP3-3Q9BYR6 98 aa9.43□□□□□ -0.9
SOX12-201ENST00000342665 KRTAP3-2Q9BYR7 98 aa9.41□□□□□ -0.9
SOX12-201ENST00000342665 AKAP9Q99996 3911 aa9.26□□□□□ -0.93
SOX12-201ENST00000342665 DNAH9Q9NYC9 4486 aa9.17□□□□□ -0.94
SOX12-201ENST00000342665 KRTAP4-5Q9BYR2 181 aa9.13□□□□□ -0.95
SOX12-201ENST00000342665 DNAH5Q8TE73 4624 aa9.03□□□□□ -0.96
SOX12-201ENST00000342665 PLECQ15149 4684 aaKnown RBP8.97□□□□□ -0.97
SOX12-201ENST00000342665 DNAH1Q9P2D7 4330 aa8.95□□□□□ -0.98
SOX12-201ENST00000342665 DNAH11Q96DT5 4516 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms