RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 PLAC8Q9NZF1 115 aa11.85□□□□□ -0.51
CNTNAP3B-202ENST00000341990 V9GYY9 64 aa11.84□□□□□ -0.51
CNTNAP3B-202ENST00000341990 Q6ZR54 194 aa11.83□□□□□ -0.51
CNTNAP3B-202ENST00000341990 CDK2AP2O75956 126 aa11.83□□□□□ -0.52
CNTNAP3B-202ENST00000341990 DNAH6Q9C0G6 4158 aa11.83□□□□□ -0.52
CNTNAP3B-202ENST00000341990 SPINK6Q6UWN8 80 aa11.81□□□□□ -0.52
CNTNAP3B-202ENST00000341990 MRPL34Q9BQ48 92 aaKnown RBP11.81□□□□□ -0.52
CNTNAP3B-202ENST00000341990 PRR15LQ9BU68 103 aa11.8□□□□□ -0.52
CNTNAP3B-202ENST00000341990 LIMD2Q9BT23 127 aa11.76□□□□□ -0.53
CNTNAP3B-202ENST00000341990 ALMS1Q8TCU4 4167 aa11.76□□□□□ -0.53
CNTNAP3B-202ENST00000341990 CHKB-CPT1BH3BT56 60 aa11.76□□□□□ -0.53
CNTNAP3B-202ENST00000341990 CIRBP-AS1Q8TBR5 109 aa11.74□□□□□ -0.53
CNTNAP3B-202ENST00000341990 IGLV7-43P04211 117 aa11.73□□□□□ -0.53
CNTNAP3B-202ENST00000341990 Q5W150 140 aa11.72□□□□□ -0.53
CNTNAP3B-202ENST00000341990 DNAH11Q96DT5 4516 aa11.71□□□□□ -0.53
CNTNAP3B-202ENST00000341990 C1orf134Q5TEV5 83 aa11.69□□□□□ -0.54
CNTNAP3B-202ENST00000341990 SPAG11AQ6PDA7 123 aa11.68□□□□□ -0.54
CNTNAP3B-202ENST00000341990 HRES1P13985 223 aa11.67□□□□□ -0.54
CNTNAP3B-202ENST00000341990 DNHD1Q96M86 4753 aa11.66□□□□□ -0.54
CNTNAP3B-202ENST00000341990 DNAH5Q8TE73 4624 aa11.65□□□□□ -0.54
CNTNAP3B-202ENST00000341990 LOC101927531A0A1B0GV80 90 aa11.63□□□□□ -0.55
CNTNAP3B-202ENST00000341990 KRTAP13-3Q3SY46 172 aa11.63□□□□□ -0.55
CNTNAP3B-202ENST00000341990 Q75L30 129 aa11.62□□□□□ -0.55
CNTNAP3B-202ENST00000341990 LY6G6CO95867 125 aa11.62□□□□□ -0.55
CNTNAP3B-202ENST00000341990 KRTAP10-2P60368 255 aa11.6□□□□□ -0.55
CNTNAP3B-202ENST00000341990 LCA10Q71F78 164 aa11.6□□□□□ -0.55
CNTNAP3B-202ENST00000341990 A6NED7 52 aa11.59□□□□□ -0.55
CNTNAP3B-202ENST00000341990 PMAIP1Q13794 54 aa11.56□□□□□ -0.56
CNTNAP3B-202ENST00000341990 LINC01558Q9Y6Z2 57 aa11.56□□□□□ -0.56
CNTNAP3B-202ENST00000341990 LRP1BQ9NZR2 4599 aa11.55□□□□□ -0.56
CNTNAP3B-202ENST00000341990 SPTSSBQ8NFR3 76 aa11.54□□□□□ -0.56
CNTNAP3B-202ENST00000341990 RETNLBQ9BQ08 111 aa11.54□□□□□ -0.56
CNTNAP3B-202ENST00000341990 PRR26Q8N8Z3 221 aa11.53□□□□□ -0.56
CNTNAP3B-202ENST00000341990 SSBP3-AS1Q7Z2R9 100 aa11.53□□□□□ -0.56
CNTNAP3B-202ENST00000341990 KRTAP13-2Q52LG2 175 aa11.51□□□□□ -0.57
CNTNAP3B-202ENST00000341990 LINC00313P59037 77 aa11.48□□□□□ -0.57
CNTNAP3B-202ENST00000341990 C8orf87E5RJ46 101 aa11.47□□□□□ -0.57
CNTNAP3B-202ENST00000341990 SPINK7P58062 85 aa11.46□□□□□ -0.57
CNTNAP3B-202ENST00000341990 PKD1P98161 4303 aa11.46□□□□□ -0.57
CNTNAP3B-202ENST00000341990 HYDINQ4G0P3 5121 aa11.46□□□□□ -0.58
CNTNAP3B-202ENST00000341990 VPS13BQ7Z7G8 4022 aa11.45□□□□□ -0.58
CNTNAP3B-202ENST00000341990 KRTAP10-1P60331 282 aa11.43□□□□□ -0.58
CNTNAP3B-202ENST00000341990 CDC42SE1Q9NRR8 79 aa11.42□□□□□ -0.58
CNTNAP3B-202ENST00000341990 ATP11AUNQ6ZP68 121 aa11.4□□□□□ -0.58
CNTNAP3B-202ENST00000341990 FAT2Q9NYQ8 4349 aa11.4□□□□□ -0.58
CNTNAP3B-202ENST00000341990 ACYP2P14621 99 aa11.39□□□□□ -0.59
CNTNAP3B-202ENST00000341990 FAM229AH3BQW9 127 aa11.37□□□□□ -0.59
CNTNAP3B-202ENST00000341990 Q6ZSA8 131 aa11.36□□□□□ -0.59
CNTNAP3B-202ENST00000341990 DMAC1Q96GE9 116 aa11.36□□□□□ -0.59
CNTNAP3B-202ENST00000341990 KRTAP16-1A8MUX0 517 aa11.35□□□□□ -0.59
CNTNAP3B-202ENST00000341990 KRTAP1-4P0C5Y4 121 aa11.34□□□□□ -0.59
CNTNAP3B-202ENST00000341990 IGKV2-30P06310 120 aa11.33□□□□□ -0.6
CNTNAP3B-202ENST00000341990 SEC61GP60059 68 aa11.33□□□□□ -0.6
CNTNAP3B-202ENST00000341990 A6NN06 94 aa11.31□□□□□ -0.6
CNTNAP3B-202ENST00000341990 PKHD1P08F94 4074 aa11.26□□□□□ -0.61
CNTNAP3B-202ENST00000341990 IGKV2D-30A0A075B6S6 120 aa11.26□□□□□ -0.61
CNTNAP3B-202ENST00000341990 KTN1-AS1Q86SY8 53 aa11.26□□□□□ -0.61
CNTNAP3B-202ENST00000341990 PLA2G1BP04054 148 aaKnown RBP11.22□□□□□ -0.61
CNTNAP3B-202ENST00000341990 TYMSOSQ8TAI1 123 aa11.18□□□□□ -0.62
CNTNAP3B-202ENST00000341990 C4orf48Q5BLP8 95 aa11.16□□□□□ -0.62
CNTNAP3B-202ENST00000341990 A0A1B0GU69 56 aa11.15□□□□□ -0.62
CNTNAP3B-202ENST00000341990 C7orf65Q6ZTY9 151 aa11.12□□□□□ -0.63
CNTNAP3B-202ENST00000341990 SPINK1P00995 79 aa11.09□□□□□ -0.63
CNTNAP3B-202ENST00000341990 RBM12B-AS1Q9P1G2 102 aa11.06□□□□□ -0.64
CNTNAP3B-202ENST00000341990 Q8N1X5 172 aa11.03□□□□□ -0.64
CNTNAP3B-202ENST00000341990 LINC00304Q8N9R0 145 aa11.01□□□□□ -0.65
CNTNAP3B-202ENST00000341990 SMR3BP02814 79 aaPredicted RBP10.98□□□□□ -0.65
CNTNAP3B-202ENST00000341990 SPATA8Q6RVD6 105 aa10.97□□□□□ -0.65
CNTNAP3B-202ENST00000341990 FAT1Q14517 4588 aa10.96□□□□□ -0.65
CNTNAP3B-202ENST00000341990 SACSQ9NZJ4 4579 aa10.96□□□□□ -0.66
CNTNAP3B-202ENST00000341990 MIR22HGQ0VDD5 57 aa10.95□□□□□ -0.66
CNTNAP3B-202ENST00000341990 DYNC1H1Q14204 4646 aaKnown RBP10.94□□□□□ -0.66
CNTNAP3B-202ENST00000341990 UQCR11O14957 56 aa10.93□□□□□ -0.66
CNTNAP3B-202ENST00000341990 C9orf92A6NGG3 77 aa10.92□□□□□ -0.66
CNTNAP3B-202ENST00000341990 PRAC1Q96KF2 57 aa10.91□□□□□ -0.66
CNTNAP3B-202ENST00000341990 ADM2Q7Z4H4 148 aa10.9□□□□□ -0.66
CNTNAP3B-202ENST00000341990 RPS29P62273 56 aaKnown RBP10.85□□□□□ -0.67
CNTNAP3B-202ENST00000341990 PKHD1L1Q86WI1 4243 aa10.81□□□□□ -0.68
CNTNAP3B-202ENST00000341990 APOBP04114 4563 aaKnown RBP10.79□□□□□ -0.68
CNTNAP3B-202ENST00000341990 A8MUU9 505 aa10.76□□□□□ -0.69
CNTNAP3B-202ENST00000341990 C20orf166-AS1Q96NR2 134 aa10.76□□□□□ -0.69
CNTNAP3B-202ENST00000341990 KRTAP3-1Q9BYR8 98 aa10.76□□□□□ -0.69
CNTNAP3B-202ENST00000341990 KRTAP10-4P60372 401 aaPredicted RBP10.75□□□□□ -0.69
CNTNAP3B-202ENST00000341990 A0A1B0GVY2 172 aa10.67□□□□□ -0.7
CNTNAP3B-202ENST00000341990 FLG2Q5D862 2391 aaPredicted RBP10.66□□□□□ -0.7
CNTNAP3B-202ENST00000341990 H0YAA0 97 aa10.64□□□□□ -0.71
CNTNAP3B-202ENST00000341990 LRP1Q07954 4544 aaKnown RBP10.59□□□□□ -0.71
CNTNAP3B-202ENST00000341990 KMT2CQ8NEZ4 4911 aaKnown RBP10.57□□□□□ -0.72
CNTNAP3B-202ENST00000341990 RYR2Q92736 4967 aa10.56□□□□□ -0.72
CNTNAP3B-202ENST00000341990 A0A1B0GU33 70 aa10.52□□□□□ -0.72
CNTNAP3B-202ENST00000341990 CSAG1Q6PB30 78 aa10.52□□□□□ -0.72
CNTNAP3B-202ENST00000341990 FAT3Q8TDW7 4589 aa10.48□□□□□ -0.73
CNTNAP3B-202ENST00000341990 H1FX-AS1Q4G0G2 97 aa10.48□□□□□ -0.73
CNTNAP3B-202ENST00000341990 HSPG2P98160 4391 aa10.47□□□□□ -0.73
CNTNAP3B-202ENST00000341990 COX6B2Q6YFQ2 88 aa10.47□□□□□ -0.73
CNTNAP3B-202ENST00000341990 TNXBP22105 4242 aa10.47□□□□□ -0.73
CNTNAP3B-202ENST00000341990 LINC01554Q52M75 96 aa10.46□□□□□ -0.74
CNTNAP3B-202ENST00000341990 DMBT1Q9UGM3 2413 aaPredicted RBP10.44□□□□□ -0.74
CNTNAP3B-202ENST00000341990 MYCBP2O75592 4640 aa10.44□□□□□ -0.74
CNTNAP3B-202ENST00000341990 KRTAP21-3Q3LHN1 58 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms