RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 NF1P21359 2839 aa11.29□□□□□ -0.6
SEMA6C-201ENST00000341697 CYSTM1Q9H1C7 97 aa11.28□□□□□ -0.6
SEMA6C-201ENST00000341697 FBN2P35556 2912 aa11.27□□□□□ -0.61
SEMA6C-201ENST00000341697 LINC01558Q9Y6Z2 57 aa11.26□□□□□ -0.61
SEMA6C-201ENST00000341697 KRTAP13-2Q52LG2 175 aa11.26□□□□□ -0.61
SEMA6C-201ENST00000341697 MYO15AQ9UKN7 3530 aa11.26□□□□□ -0.61
SEMA6C-201ENST00000341697 CAMK2N1Q7Z7J9 78 aa11.22□□□□□ -0.61
SEMA6C-201ENST00000341697 NOTCH2NLQ7Z3S9 236 aa11.21□□□□□ -0.61
SEMA6C-201ENST00000341697 Q75L30 129 aa11.2□□□□□ -0.62
SEMA6C-201ENST00000341697 Q5XG85 94 aa11.18□□□□□ -0.62
SEMA6C-201ENST00000341697 DMAC1Q96GE9 116 aa11.18□□□□□ -0.62
SEMA6C-201ENST00000341697 FLG2Q5D862 2391 aaPredicted RBP11.17□□□□□ -0.62
SEMA6C-201ENST00000341697 R4GN34 69 aa11.12□□□□□ -0.63
SEMA6C-201ENST00000341697 MXRA5Q9NR99 2828 aa11.11□□□□□ -0.63
SEMA6C-201ENST00000341697 KTN1-AS1Q86SY8 53 aa11.08□□□□□ -0.64
SEMA6C-201ENST00000341697 RELNP78509 3460 aa11.06□□□□□ -0.64
SEMA6C-201ENST00000341697 Q5VV11 94 aa10.98□□□□□ -0.65
SEMA6C-201ENST00000341697 PDZD2O15018 2839 aa10.97□□□□□ -0.65
SEMA6C-201ENST00000341697 DCHS1Q96JQ0 3298 aa10.96□□□□□ -0.65
SEMA6C-201ENST00000341697 LCA10Q71F78 164 aa10.96□□□□□ -0.66
SEMA6C-201ENST00000341697 RPL37P61927 97 aaKnown RBP10.94□□□□□ -0.66
SEMA6C-201ENST00000341697 H1FX-AS1Q4G0G2 97 aa10.92□□□□□ -0.66
SEMA6C-201ENST00000341697 M0QZ58 72 aa10.91□□□□□ -0.66
SEMA6C-201ENST00000341697 CELSR1Q9NYQ6 3014 aa10.89□□□□□ -0.67
SEMA6C-201ENST00000341697 ADM2Q7Z4H4 148 aa10.88□□□□□ -0.67
SEMA6C-201ENST00000341697 TENM1Q9UKZ4 2725 aa10.87□□□□□ -0.67
SEMA6C-201ENST00000341697 KRTAP1-4P0C5Y4 121 aa10.87□□□□□ -0.67
SEMA6C-201ENST00000341697 LAMA5O15230 3695 aa10.86□□□□□ -0.67
SEMA6C-201ENST00000341697 TENM2Q9NT68 2774 aa10.85□□□□□ -0.67
SEMA6C-201ENST00000341697 TENM3Q9P273 2699 aa10.82□□□□□ -0.68
SEMA6C-201ENST00000341697 MUC3AQ02505 3323 aa10.81□□□□□ -0.68
SEMA6C-201ENST00000341697 WDFY3Q8IZQ1 3526 aa10.79□□□□□ -0.68
SEMA6C-201ENST00000341697 A8MUU9 505 aa10.78□□□□□ -0.68
SEMA6C-201ENST00000341697 C20orf166-AS1Q96NR2 134 aa10.75□□□□□ -0.69
SEMA6C-201ENST00000341697 OTOGQ6ZRI0 2925 aa10.74□□□□□ -0.69
SEMA6C-201ENST00000341697 DMDP11532 3685 aa10.72□□□□□ -0.69
SEMA6C-201ENST00000341697 ASPMQ8IZT6 3477 aa10.71□□□□□ -0.69
SEMA6C-201ENST00000341697 SPATA8Q6RVD6 105 aa10.71□□□□□ -0.7
SEMA6C-201ENST00000341697 PLAC4Q8WY50 150 aa10.7□□□□□ -0.7
SEMA6C-201ENST00000341697 NBPF19A0A087WUL8 3843 aa10.63□□□□□ -0.71
SEMA6C-201ENST00000341697 PKD1L1Q8TDX9 2849 aa10.62□□□□□ -0.71
SEMA6C-201ENST00000341697 LUZP6Q538Z0 58 aa10.62□□□□□ -0.71
SEMA6C-201ENST00000341697 ROMO1P60602 79 aa10.61□□□□□ -0.71
SEMA6C-201ENST00000341697 XP32Q5T750 250 aa10.6□□□□□ -0.71
SEMA6C-201ENST00000341697 A0A1B0GVY2 172 aa10.59□□□□□ -0.71
SEMA6C-201ENST00000341697 ZFHX4Q86UP3 3567 aa10.58□□□□□ -0.71
SEMA6C-201ENST00000341697 PRAC1Q96KF2 57 aa10.58□□□□□ -0.72
SEMA6C-201ENST00000341697 TPRXLQ17RH7 258 aa10.51□□□□□ -0.73
SEMA6C-201ENST00000341697 FBN1P35555 2871 aaKnown RBP10.47□□□□□ -0.73
SEMA6C-201ENST00000341697 TGP01266 2768 aa10.46□□□□□ -0.74
SEMA6C-201ENST00000341697 VWFP04275 2813 aa10.43□□□□□ -0.74
SEMA6C-201ENST00000341697 ZFHX3Q15911 3703 aa10.41□□□□□ -0.74
SEMA6C-201ENST00000341697 A8MU10 97 aa10.4□□□□□ -0.74
SEMA6C-201ENST00000341697 KRTAP16-1A8MUX0 517 aa10.37□□□□□ -0.75
SEMA6C-201ENST00000341697 ANK3Q12955 4377 aaKnown RBP10.36□□□□□ -0.75
SEMA6C-201ENST00000341697 KRTAP10-8P60410 259 aa10.35□□□□□ -0.75
SEMA6C-201ENST00000341697 KRTAP13-3Q3SY46 172 aa10.35□□□□□ -0.75
SEMA6C-201ENST00000341697 SMG1Q96Q15 3661 aaKnown RBP10.34□□□□□ -0.75
SEMA6C-201ENST00000341697 CSMD1Q96PZ7 3565 aa10.18□□□□□ -0.78
SEMA6C-201ENST00000341697 H3BS24 57 aa10.18□□□□□ -0.78
SEMA6C-201ENST00000341697 CSMD2Q7Z408 3487 aa10.12□□□□□ -0.79
SEMA6C-201ENST00000341697 SPENQ96T58 3664 aaKnown RBP10.1□□□□□ -0.79
SEMA6C-201ENST00000341697 A6NN06 94 aa10.09□□□□□ -0.79
SEMA6C-201ENST00000341697 TNP1P09430 55 aa10.04□□□□□ -0.8
SEMA6C-201ENST00000341697 BSNQ9UPA5 3926 aa10.01□□□□□ -0.81
SEMA6C-201ENST00000341697 SVEP1Q4LDE5 3571 aa10.01□□□□□ -0.81
SEMA6C-201ENST00000341697 KRTAP25-1Q3LHN0 102 aa10□□□□□ -0.81
SEMA6C-201ENST00000341697 A0A0A0MQY5 61 aa9.99□□□□□ -0.81
SEMA6C-201ENST00000341697 KRTAP10-10P60014 251 aa9.97□□□□□ -0.81
SEMA6C-201ENST00000341697 TRRAPQ9Y4A5 3859 aa9.96□□□□□ -0.82
SEMA6C-201ENST00000341697 FBN3Q75N90 2809 aa9.86□□□□□ -0.83
SEMA6C-201ENST00000341697 SRRM2Q9UQ35 2752 aaKnown RBP9.84□□□□□ -0.83
SEMA6C-201ENST00000341697 H0YAA0 97 aa9.84□□□□□ -0.84
SEMA6C-201ENST00000341697 P0C880 135 aa9.82□□□□□ -0.84
SEMA6C-201ENST00000341697 MEGF8Q7Z7M0 2845 aa9.76□□□□□ -0.85
SEMA6C-201ENST00000341697 PP632Q6XCG6 107 aa9.7□□□□□ -0.86
SEMA6C-201ENST00000341697 PRO2289Q9P1D8 64 aa9.67□□□□□ -0.86
SEMA6C-201ENST00000341697 CUBNO60494 3623 aa9.66□□□□□ -0.86
SEMA6C-201ENST00000341697 HUWE1Q7Z6Z7 4374 aaKnown RBP9.63□□□□□ -0.87
SEMA6C-201ENST00000341697 MT1HL1P0DM35 61 aa9.63□□□□□ -0.87
SEMA6C-201ENST00000341697 COL7A1Q02388 2944 aa9.58□□□□□ -0.88
SEMA6C-201ENST00000341697 C10orf95Q9H7T3 257 aa9.56□□□□□ -0.88
SEMA6C-201ENST00000341697 KRTAP3-1Q9BYR8 98 aa9.52□□□□□ -0.88
SEMA6C-201ENST00000341697 KRTAP10-4P60372 401 aaPredicted RBP9.51□□□□□ -0.89
SEMA6C-201ENST00000341697 KRTAP4-5Q9BYR2 181 aa9.43□□□□□ -0.9
SEMA6C-201ENST00000341697 VPS13CQ709C8 3753 aa9.4□□□□□ -0.91
SEMA6C-201ENST00000341697 NDUFAF8A1L188 74 aa9.33□□□□□ -0.92
SEMA6C-201ENST00000341697 KRTAP12-2P59991 146 aa9.33□□□□□ -0.92
SEMA6C-201ENST00000341697 ALMS1Q8TCU4 4167 aa9.32□□□□□ -0.92
SEMA6C-201ENST00000341697 AKAP9Q99996 3911 aa9.3□□□□□ -0.92
SEMA6C-201ENST00000341697 ZNF469Q96JG9 3925 aaPredicted RBP9.29□□□□□ -0.92
SEMA6C-201ENST00000341697 DNAH9Q9NYC9 4486 aa9.29□□□□□ -0.92
SEMA6C-201ENST00000341697 KRTAP12-1P59990 96 aa9.23□□□□□ -0.93
SEMA6C-201ENST00000341697 KRTAP13-4Q3LI77 160 aa9.15□□□□□ -0.94
SEMA6C-201ENST00000341697 KRTAP10-6P60371 365 aaPredicted RBP9.14□□□□□ -0.95
SEMA6C-201ENST00000341697 DNHD1Q96M86 4753 aa9.01□□□□□ -0.97
SEMA6C-201ENST00000341697 DNAH5Q8TE73 4624 aa9.01□□□□□ -0.97
SEMA6C-201ENST00000341697 KRTAP3-3Q9BYR6 98 aa8.97□□□□□ -0.97
SEMA6C-201ENST00000341697 PLECQ15149 4684 aaKnown RBP8.93□□□□□ -0.98
SEMA6C-201ENST00000341697 DNAH1Q9P2D7 4330 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms