RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 LCE6AA0A183 80 aa11.35□□□□□ -0.59
CDK13-202ENST00000340829 RELNP78509 3460 aa11.33□□□□□ -0.6
CDK13-202ENST00000340829 NOTCH2NLQ7Z3S9 236 aa11.32□□□□□ -0.6
CDK13-202ENST00000340829 TENM4Q6N022 2769 aa11.32□□□□□ -0.6
CDK13-202ENST00000340829 Q5VSD8 79 aa11.28□□□□□ -0.6
CDK13-202ENST00000340829 DMAC1Q96GE9 116 aa11.25□□□□□ -0.61
CDK13-202ENST00000340829 CAMK2N1Q7Z7J9 78 aa11.22□□□□□ -0.61
CDK13-202ENST00000340829 MXRA5Q9NR99 2828 aa11.2□□□□□ -0.62
CDK13-202ENST00000340829 S4R3F8 94 aa11.2□□□□□ -0.62
CDK13-202ENST00000340829 LAMA5O15230 3695 aa11.19□□□□□ -0.62
CDK13-202ENST00000340829 KRTAP13-1Q8IUC0 172 aa11.18□□□□□ -0.62
CDK13-202ENST00000340829 DCHS1Q96JQ0 3298 aa11.17□□□□□ -0.62
CDK13-202ENST00000340829 ASPMQ8IZT6 3477 aa11.17□□□□□ -0.62
CDK13-202ENST00000340829 PRAC1Q96KF2 57 aa11.17□□□□□ -0.62
CDK13-202ENST00000340829 ZFHX4Q86UP3 3567 aa11.16□□□□□ -0.62
CDK13-202ENST00000340829 CSAG1Q6PB30 78 aa11.15□□□□□ -0.62
CDK13-202ENST00000340829 M0R2T5 61 aa11.15□□□□□ -0.62
CDK13-202ENST00000340829 LUZP6Q538Z0 58 aa11.08□□□□□ -0.64
CDK13-202ENST00000340829 DMDP11532 3685 aa11.08□□□□□ -0.64
CDK13-202ENST00000340829 KRTAP13-2Q52LG2 175 aa11.07□□□□□ -0.64
CDK13-202ENST00000340829 ASB16-AS1Q495Z4 193 aa11.07□□□□□ -0.64
CDK13-202ENST00000340829 MUC3AQ02505 3323 aa11.05□□□□□ -0.64
CDK13-202ENST00000340829 R4GN34 69 aa10.96□□□□□ -0.66
CDK13-202ENST00000340829 SEC61BP60468 96 aaKnown RBP10.95□□□□□ -0.66
CDK13-202ENST00000340829 H1FX-AS1Q4G0G2 97 aa10.94□□□□□ -0.66
CDK13-202ENST00000340829 CELSR1Q9NYQ6 3014 aa10.94□□□□□ -0.66
CDK13-202ENST00000340829 TENM3Q9P273 2699 aa10.89□□□□□ -0.67
CDK13-202ENST00000340829 SPATA8Q6RVD6 105 aa10.89□□□□□ -0.67
CDK13-202ENST00000340829 RPS29P62273 56 aaKnown RBP10.89□□□□□ -0.67
CDK13-202ENST00000340829 RPL37P61927 97 aaKnown RBP10.89□□□□□ -0.67
CDK13-202ENST00000340829 SMG1Q96Q15 3661 aaKnown RBP10.81□□□□□ -0.68
CDK13-202ENST00000340829 CSMD1Q96PZ7 3565 aa10.8□□□□□ -0.68
CDK13-202ENST00000340829 M0QZ58 72 aa10.78□□□□□ -0.68
CDK13-202ENST00000340829 ADM2Q7Z4H4 148 aa10.78□□□□□ -0.68
CDK13-202ENST00000340829 ROMO1P60602 79 aa10.75□□□□□ -0.69
CDK13-202ENST00000340829 TENM1Q9UKZ4 2725 aa10.75□□□□□ -0.69
CDK13-202ENST00000340829 A8MU10 97 aa10.73□□□□□ -0.69
CDK13-202ENST00000340829 PDZD2O15018 2839 aa10.69□□□□□ -0.7
CDK13-202ENST00000340829 A6NN06 94 aa10.63□□□□□ -0.71
CDK13-202ENST00000340829 KRTAP21-3Q3LHN1 58 aa10.63□□□□□ -0.71
CDK13-202ENST00000340829 KRTAP1-4P0C5Y4 121 aa10.63□□□□□ -0.71
CDK13-202ENST00000340829 TENM2Q9NT68 2774 aa10.59□□□□□ -0.71
CDK13-202ENST00000340829 SVEP1Q4LDE5 3571 aa10.58□□□□□ -0.72
CDK13-202ENST00000340829 PKD1L1Q8TDX9 2849 aa10.57□□□□□ -0.72
CDK13-202ENST00000340829 FBN1P35555 2871 aaKnown RBP10.56□□□□□ -0.72
CDK13-202ENST00000340829 NBPF19A0A087WUL8 3843 aa10.56□□□□□ -0.72
CDK13-202ENST00000340829 A8MUU9 505 aa10.56□□□□□ -0.72
CDK13-202ENST00000340829 VWFP04275 2813 aa10.56□□□□□ -0.72
CDK13-202ENST00000340829 C20orf166-AS1Q96NR2 134 aa10.53□□□□□ -0.72
CDK13-202ENST00000340829 H3BS24 57 aa10.52□□□□□ -0.72
CDK13-202ENST00000340829 OTOGQ6ZRI0 2925 aa10.48□□□□□ -0.73
CDK13-202ENST00000340829 A0A0A0MQY5 61 aa10.46□□□□□ -0.74
CDK13-202ENST00000340829 TGP01266 2768 aa10.45□□□□□ -0.74
CDK13-202ENST00000340829 PLAC4Q8WY50 150 aa10.41□□□□□ -0.74
CDK13-202ENST00000340829 SPENQ96T58 3664 aaKnown RBP10.39□□□□□ -0.75
CDK13-202ENST00000340829 CUBNO60494 3623 aa10.37□□□□□ -0.75
CDK13-202ENST00000340829 KRTAP25-1Q3LHN0 102 aa10.36□□□□□ -0.75
CDK13-202ENST00000340829 ZFHX3Q15911 3703 aa10.36□□□□□ -0.75
CDK13-202ENST00000340829 KRTAP16-1A8MUX0 517 aa10.34□□□□□ -0.75
CDK13-202ENST00000340829 CSMD2Q7Z408 3487 aa10.31□□□□□ -0.76
CDK13-202ENST00000340829 XP32Q5T750 250 aa10.31□□□□□ -0.76
CDK13-202ENST00000340829 ANK3Q12955 4377 aaKnown RBP10.17□□□□□ -0.78
CDK13-202ENST00000340829 BSNQ9UPA5 3926 aa10.14□□□□□ -0.79
CDK13-202ENST00000340829 H0YAA0 97 aa10.1□□□□□ -0.79
CDK13-202ENST00000340829 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
CDK13-202ENST00000340829 TRRAPQ9Y4A5 3859 aa10.05□□□□□ -0.8
CDK13-202ENST00000340829 A0A1B0GVY2 172 aa10.01□□□□□ -0.81
CDK13-202ENST00000340829 TPRXLQ17RH7 258 aa10.01□□□□□ -0.81
CDK13-202ENST00000340829 FBN3Q75N90 2809 aa9.96□□□□□ -0.82
CDK13-202ENST00000340829 C10orf95Q9H7T3 257 aa9.93□□□□□ -0.82
CDK13-202ENST00000340829 NDUFAF8A1L188 74 aa9.92□□□□□ -0.82
CDK13-202ENST00000340829 SRRM2Q9UQ35 2752 aaKnown RBP9.92□□□□□ -0.82
CDK13-202ENST00000340829 KRTAP10-8P60410 259 aa9.91□□□□□ -0.82
CDK13-202ENST00000340829 TNP1P09430 55 aa9.91□□□□□ -0.82
CDK13-202ENST00000340829 P0C880 135 aa9.9□□□□□ -0.83
CDK13-202ENST00000340829 MEGF8Q7Z7M0 2845 aa9.78□□□□□ -0.84
CDK13-202ENST00000340829 VPS13CQ709C8 3753 aa9.73□□□□□ -0.85
CDK13-202ENST00000340829 COL7A1Q02388 2944 aa9.64□□□□□ -0.87
CDK13-202ENST00000340829 KRTAP3-1Q9BYR8 98 aa9.62□□□□□ -0.87
CDK13-202ENST00000340829 PP632Q6XCG6 107 aa9.61□□□□□ -0.87
CDK13-202ENST00000340829 KRTAP10-10P60014 251 aa9.56□□□□□ -0.88
CDK13-202ENST00000340829 KRTAP12-2P59991 146 aa9.5□□□□□ -0.89
CDK13-202ENST00000340829 HUWE1Q7Z6Z7 4374 aaKnown RBP9.49□□□□□ -0.89
CDK13-202ENST00000340829 ZNF469Q96JG9 3925 aaPredicted RBP9.42□□□□□ -0.9
CDK13-202ENST00000340829 KRTAP12-1P59990 96 aa9.34□□□□□ -0.91
CDK13-202ENST00000340829 KRTAP13-4Q3LI77 160 aa9.28□□□□□ -0.92
CDK13-202ENST00000340829 KRTAP10-6P60371 365 aaPredicted RBP9.27□□□□□ -0.93
CDK13-202ENST00000340829 CSMD3Q7Z407 3707 aa9.25□□□□□ -0.93
CDK13-202ENST00000340829 MT1HL1P0DM35 61 aa9.23□□□□□ -0.93
CDK13-202ENST00000340829 PRO2289Q9P1D8 64 aa9.22□□□□□ -0.93
CDK13-202ENST00000340829 AKAP9Q99996 3911 aa9.21□□□□□ -0.94
CDK13-202ENST00000340829 KRTAP10-4P60372 401 aaPredicted RBP9.18□□□□□ -0.94
CDK13-202ENST00000340829 DNAH9Q9NYC9 4486 aa9.08□□□□□ -0.96
CDK13-202ENST00000340829 KRTAP3-3Q9BYR6 98 aa9.04□□□□□ -0.96
CDK13-202ENST00000340829 KRTAP3-2Q9BYR7 98 aa9□□□□□ -0.97
CDK13-202ENST00000340829 KRTAP4-5Q9BYR2 181 aa8.98□□□□□ -0.97
CDK13-202ENST00000340829 PLECQ15149 4684 aaKnown RBP8.91□□□□□ -0.98
CDK13-202ENST00000340829 DNAH5Q8TE73 4624 aa8.88□□□□□ -0.99
CDK13-202ENST00000340829 DNAH1Q9P2D7 4330 aa8.87□□□□□ -0.99
CDK13-202ENST00000340829 ALMS1Q8TCU4 4167 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms