RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 PRAC1Q96KF2 57 aa12.1□□□□□ -0.47
RUNX3-202ENST00000338888 LINC00483Q53H64 154 aa12.09□□□□□ -0.47
RUNX3-202ENST00000338888 WWC2-AS2Q96NR7 200 aa12.08□□□□□ -0.48
RUNX3-202ENST00000338888 SPINK6Q6UWN8 80 aa12.07□□□□□ -0.48
RUNX3-202ENST00000338888 PRKDCP78527 4128 aaKnown RBP12.06□□□□□ -0.48
RUNX3-202ENST00000338888 ACYP2P14621 99 aa12.06□□□□□ -0.48
RUNX3-202ENST00000338888 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.06□□□□□ -0.48
RUNX3-202ENST00000338888 MEGF8Q7Z7M0 2845 aa12.06□□□□□ -0.48
RUNX3-202ENST00000338888 ADM2Q7Z4H4 148 aa12.04□□□□□ -0.48
RUNX3-202ENST00000338888 APLNQ9ULZ1 77 aa12.04□□□□□ -0.48
RUNX3-202ENST00000338888 KRTAP13-3Q3SY46 172 aa12.03□□□□□ -0.48
RUNX3-202ENST00000338888 DNAH7Q8WXX0 4024 aa12.03□□□□□ -0.48
RUNX3-202ENST00000338888 C8orf87E5RJ46 101 aa12□□□□□ -0.49
RUNX3-202ENST00000338888 PLECQ15149 4684 aaKnown RBP11.99□□□□□ -0.49
RUNX3-202ENST00000338888 ZNF706Q9Y5V0 76 aaPredicted RBP11.99□□□□□ -0.49
RUNX3-202ENST00000338888 SPACA4Q8TDM5 124 aa11.98□□□□□ -0.49
RUNX3-202ENST00000338888 ALMS1Q8TCU4 4167 aa11.96□□□□□ -0.49
RUNX3-202ENST00000338888 A0A1B0GU69 56 aa11.95□□□□□ -0.5
RUNX3-202ENST00000338888 PSORS1C2Q9UIG4 136 aa11.95□□□□□ -0.5
RUNX3-202ENST00000338888 DYNC2H1Q8NCM8 4307 aaKnown RBP11.93□□□□□ -0.5
RUNX3-202ENST00000338888 DMAC1Q96GE9 116 aa11.93□□□□□ -0.5
RUNX3-202ENST00000338888 NUPR2A6NF83 97 aa11.92□□□□□ -0.5
RUNX3-202ENST00000338888 PLA2G1BP04054 148 aaKnown RBP11.92□□□□□ -0.5
RUNX3-202ENST00000338888 RETNLBQ9BQ08 111 aa11.91□□□□□ -0.5
RUNX3-202ENST00000338888 STARD9Q9P2P6 4700 aa11.91□□□□□ -0.5
RUNX3-202ENST00000338888 NBDYA0A0U1RRE5 68 aa11.9□□□□□ -0.5
RUNX3-202ENST00000338888 Q6ZRN7 208 aaPredicted RBP11.89□□□□□ -0.51
RUNX3-202ENST00000338888 FRAS1Q86XX4 4008 aa11.89□□□□□ -0.51
RUNX3-202ENST00000338888 IGLV5-52A0A0A0MRZ9 124 aa11.89□□□□□ -0.51
RUNX3-202ENST00000338888 ZNF861PO60384 105 aa11.87□□□□□ -0.51
RUNX3-202ENST00000338888 DNAH8Q96JB1 4490 aa11.87□□□□□ -0.51
RUNX3-202ENST00000338888 SPATA8Q6RVD6 105 aa11.87□□□□□ -0.51
RUNX3-202ENST00000338888 CIRBP-AS1Q8TBR5 109 aa11.87□□□□□ -0.51
RUNX3-202ENST00000338888 RTL8CO15255 209 aa11.83□□□□□ -0.52
RUNX3-202ENST00000338888 LINC01554Q52M75 96 aa11.82□□□□□ -0.52
RUNX3-202ENST00000338888 MIR22HGQ0VDD5 57 aa11.82□□□□□ -0.52
RUNX3-202ENST00000338888 TGP01266 2768 aa11.81□□□□□ -0.52
RUNX3-202ENST00000338888 FBN3Q75N90 2809 aa11.8□□□□□ -0.52
RUNX3-202ENST00000338888 UQCR11O14957 56 aa11.78□□□□□ -0.52
RUNX3-202ENST00000338888 FAM229AH3BQW9 127 aa11.76□□□□□ -0.53
RUNX3-202ENST00000338888 IGKV2-30P06310 120 aa11.75□□□□□ -0.53
RUNX3-202ENST00000338888 A0A087WTM6 91 aa11.73□□□□□ -0.53
RUNX3-202ENST00000338888 C4orf48Q5BLP8 95 aa11.73□□□□□ -0.53
RUNX3-202ENST00000338888 VPS13DQ5THJ4 4388 aa11.72□□□□□ -0.53
RUNX3-202ENST00000338888 KMT2AQ03164 3969 aa11.71□□□□□ -0.54
RUNX3-202ENST00000338888 IGLV7-43P04211 117 aa11.66□□□□□ -0.54
RUNX3-202ENST00000338888 HECTD4Q9Y4D8 3996 aa11.66□□□□□ -0.54
RUNX3-202ENST00000338888 CSAG1Q6PB30 78 aa11.65□□□□□ -0.54
RUNX3-202ENST00000338888 IGKV2D-30A0A075B6S6 120 aa11.64□□□□□ -0.55
RUNX3-202ENST00000338888 LY6G6CO95867 125 aa11.63□□□□□ -0.55
RUNX3-202ENST00000338888 SSBP3-AS1Q7Z2R9 100 aa11.63□□□□□ -0.55
RUNX3-202ENST00000338888 DNAH17Q9UFH2 4485 aa11.61□□□□□ -0.55
RUNX3-202ENST00000338888 DNAH2Q9P225 4427 aa11.61□□□□□ -0.55
RUNX3-202ENST00000338888 KRTAP21-3Q3LHN1 58 aa11.58□□□□□ -0.55
RUNX3-202ENST00000338888 KRTAP16-1A8MUX0 517 aa11.56□□□□□ -0.56
RUNX3-202ENST00000338888 SPINK1P00995 79 aa11.53□□□□□ -0.56
RUNX3-202ENST00000338888 C1orf134Q5TEV5 83 aa11.51□□□□□ -0.57
RUNX3-202ENST00000338888 H3BS24 57 aa11.49□□□□□ -0.57
RUNX3-202ENST00000338888 KRTAP13-2Q52LG2 175 aa11.47□□□□□ -0.57
RUNX3-202ENST00000338888 Q8N1X5 172 aa11.42□□□□□ -0.58
RUNX3-202ENST00000338888 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
RUNX3-202ENST00000338888 DNAH11Q96DT5 4516 aa11.33□□□□□ -0.6
RUNX3-202ENST00000338888 DNAH6Q9C0G6 4158 aa11.32□□□□□ -0.6
RUNX3-202ENST00000338888 Q6ZSA8 131 aa11.32□□□□□ -0.6
RUNX3-202ENST00000338888 KRTAP10-2P60368 255 aa11.31□□□□□ -0.6
RUNX3-202ENST00000338888 H0YAA0 97 aa11.3□□□□□ -0.6
RUNX3-202ENST00000338888 A8MUU9 505 aa11.28□□□□□ -0.6
RUNX3-202ENST00000338888 DNAH5Q8TE73 4624 aa11.25□□□□□ -0.61
RUNX3-202ENST00000338888 TYMSOSQ8TAI1 123 aa11.24□□□□□ -0.61
RUNX3-202ENST00000338888 LINC00304Q8N9R0 145 aa11.23□□□□□ -0.61
RUNX3-202ENST00000338888 KRTAP25-1Q3LHN0 102 aa11.22□□□□□ -0.61
RUNX3-202ENST00000338888 KRTAP1-4P0C5Y4 121 aa11.2□□□□□ -0.62
RUNX3-202ENST00000338888 FAT2Q9NYQ8 4349 aa11.19□□□□□ -0.62
RUNX3-202ENST00000338888 LRP1BQ9NZR2 4599 aa11.17□□□□□ -0.62
RUNX3-202ENST00000338888 A0A1B0GU33 70 aa11.16□□□□□ -0.62
RUNX3-202ENST00000338888 PKD1P98161 4303 aa11.15□□□□□ -0.62
RUNX3-202ENST00000338888 KRTAP10-1P60331 282 aa11.15□□□□□ -0.62
RUNX3-202ENST00000338888 SACSQ9NZJ4 4579 aa11.12□□□□□ -0.63
RUNX3-202ENST00000338888 FLG2Q5D862 2391 aaPredicted RBP11.11□□□□□ -0.63
RUNX3-202ENST00000338888 ROMO1P60602 79 aa11.09□□□□□ -0.63
RUNX3-202ENST00000338888 H1FX-AS1Q4G0G2 97 aa11.07□□□□□ -0.64
RUNX3-202ENST00000338888 CRIPTQ9P021 101 aa11.07□□□□□ -0.64
RUNX3-202ENST00000338888 KRTAP3-1Q9BYR8 98 aa11.04□□□□□ -0.64
RUNX3-202ENST00000338888 PKHD1P08F94 4074 aa11.01□□□□□ -0.65
RUNX3-202ENST00000338888 VPS13BQ7Z7G8 4022 aa10.99□□□□□ -0.65
RUNX3-202ENST00000338888 C9orf92A6NGG3 77 aa10.95□□□□□ -0.66
RUNX3-202ENST00000338888 K7ERS5 55 aa10.9□□□□□ -0.66
RUNX3-202ENST00000338888 KMT2CQ8NEZ4 4911 aaKnown RBP10.9□□□□□ -0.66
RUNX3-202ENST00000338888 COX6B2Q6YFQ2 88 aa10.88□□□□□ -0.67
RUNX3-202ENST00000338888 C20orf166-AS1Q96NR2 134 aa10.84□□□□□ -0.67
RUNX3-202ENST00000338888 RYR2Q92736 4967 aa10.83□□□□□ -0.67
RUNX3-202ENST00000338888 DYNC1H1Q14204 4646 aaKnown RBP10.83□□□□□ -0.68
RUNX3-202ENST00000338888 SMR3BP02814 79 aaPredicted RBP10.83□□□□□ -0.68
RUNX3-202ENST00000338888 P0C880 135 aa10.81□□□□□ -0.68
RUNX3-202ENST00000338888 A0A1B0GVY2 172 aa10.78□□□□□ -0.68
RUNX3-202ENST00000338888 RPS29P62273 56 aaKnown RBP10.78□□□□□ -0.68
RUNX3-202ENST00000338888 FAT1Q14517 4588 aa10.7□□□□□ -0.7
RUNX3-202ENST00000338888 APOBP04114 4563 aaKnown RBP10.67□□□□□ -0.7
RUNX3-202ENST00000338888 RPL37P61927 97 aaKnown RBP10.66□□□□□ -0.7
RUNX3-202ENST00000338888 A0A0D9SG42 100 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms