RNA–Protein interactions for RNA: ENST00000335509.10

TPCN1-201, Transcript of two pore segment channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPCN1, Length 5,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-201ENST00000335509 A0A087X002 238 aa9.38□□□□□ -0.91
TPCN1-201ENST00000335509 NOTCH2NLQ7Z3S9 236 aa9.38□□□□□ -0.91
TPCN1-201ENST00000335509 DMXL1Q9Y485 3027 aa9.37□□□□□ -0.91
TPCN1-201ENST00000335509 Q6ZR54 194 aa9.37□□□□□ -0.91
TPCN1-201ENST00000335509 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
TPCN1-201ENST00000335509 R4GN34 69 aa9.35□□□□□ -0.91
TPCN1-201ENST00000335509 LOC400499M0QZD8 3231 aa9.33□□□□□ -0.92
TPCN1-201ENST00000335509 Q5VSD8 79 aa9.31□□□□□ -0.92
TPCN1-201ENST00000335509 KRTAP7-1Q8IUC3 87 aa9.29□□□□□ -0.92
TPCN1-201ENST00000335509 TENM1Q9UKZ4 2725 aa9.29□□□□□ -0.92
TPCN1-201ENST00000335509 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
TPCN1-201ENST00000335509 LCE6AA0A183 80 aa9.27□□□□□ -0.93
TPCN1-201ENST00000335509 SPATA8Q6RVD6 105 aa9.21□□□□□ -0.93
TPCN1-201ENST00000335509 SEC61BP60468 96 aaKnown RBP9.21□□□□□ -0.93
TPCN1-201ENST00000335509 H1FX-AS1Q4G0G2 97 aa9.2□□□□□ -0.94
TPCN1-201ENST00000335509 PKD1L1Q8TDX9 2849 aa9.2□□□□□ -0.94
TPCN1-201ENST00000335509 Q6ZRN7 208 aaPredicted RBP9.2□□□□□ -0.94
TPCN1-201ENST00000335509 HRNRQ86YZ3 2850 aaPredicted RBP9.18□□□□□ -0.94
TPCN1-201ENST00000335509 M0QZ58 72 aa9.16□□□□□ -0.94
TPCN1-201ENST00000335509 H3BS24 57 aa9.16□□□□□ -0.94
TPCN1-201ENST00000335509 ROMO1P60602 79 aa9.15□□□□□ -0.94
TPCN1-201ENST00000335509 DMDP11532 3685 aa9.14□□□□□ -0.95
TPCN1-201ENST00000335509 WDFY3Q8IZQ1 3526 aa9.14□□□□□ -0.95
TPCN1-201ENST00000335509 DCHS1Q96JQ0 3298 aa9.1□□□□□ -0.95
TPCN1-201ENST00000335509 MXRA5Q9NR99 2828 aa9.09□□□□□ -0.95
TPCN1-201ENST00000335509 ASB16-AS1Q495Z4 193 aa9.07□□□□□ -0.96
TPCN1-201ENST00000335509 ADM2Q7Z4H4 148 aa9.07□□□□□ -0.96
TPCN1-201ENST00000335509 KRTAP13-2Q52LG2 175 aa9.07□□□□□ -0.96
TPCN1-201ENST00000335509 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
TPCN1-201ENST00000335509 CELSR1Q9NYQ6 3014 aa9.05□□□□□ -0.96
TPCN1-201ENST00000335509 MUC3AQ02505 3323 aa9.05□□□□□ -0.96
TPCN1-201ENST00000335509 A8MU10 97 aa9.03□□□□□ -0.96
TPCN1-201ENST00000335509 TENM2Q9NT68 2774 aa9.03□□□□□ -0.96
TPCN1-201ENST00000335509 PDZD2O15018 2839 aa9□□□□□ -0.97
TPCN1-201ENST00000335509 VWFP04275 2813 aa9□□□□□ -0.97
TPCN1-201ENST00000335509 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
TPCN1-201ENST00000335509 A0A0A0MQY5 61 aa8.95□□□□□ -0.98
TPCN1-201ENST00000335509 A6NN06 94 aa8.95□□□□□ -0.98
TPCN1-201ENST00000335509 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
TPCN1-201ENST00000335509 TGP01266 2768 aa8.88□□□□□ -0.99
TPCN1-201ENST00000335509 RELNP78509 3460 aa8.86□□□□□ -0.99
TPCN1-201ENST00000335509 A8MUU9 505 aa8.82□□□□□ -1
TPCN1-201ENST00000335509 FBN1P35555 2871 aaKnown RBP8.82□□□□□ -1
TPCN1-201ENST00000335509 KRTAP25-1Q3LHN0 102 aa8.81□□□□□ -1
TPCN1-201ENST00000335509 ASPMQ8IZT6 3477 aa8.81□□□□□ -1
TPCN1-201ENST00000335509 PLAC4Q8WY50 150 aa8.79□□□□□ -1
TPCN1-201ENST00000335509 LAMA5O15230 3695 aa8.77□□□□□ -1.01
TPCN1-201ENST00000335509 ZFHX4Q86UP3 3567 aa8.74□□□□□ -1.01
TPCN1-201ENST00000335509 C20orf166-AS1Q96NR2 134 aa8.68□□□□□ -1.02
TPCN1-201ENST00000335509 KRTAP1-4P0C5Y4 121 aa8.63□□□□□ -1.03
TPCN1-201ENST00000335509 NDUFAF8A1L188 74 aa8.6□□□□□ -1.03
TPCN1-201ENST00000335509 KRTAP16-1A8MUX0 517 aa8.55□□□□□ -1.04
TPCN1-201ENST00000335509 CUBNO60494 3623 aa8.54□□□□□ -1.04
TPCN1-201ENST00000335509 SMG1Q96Q15 3661 aaKnown RBP8.53□□□□□ -1.04
TPCN1-201ENST00000335509 SPENQ96T58 3664 aaKnown RBP8.53□□□□□ -1.04
TPCN1-201ENST00000335509 BSNQ9UPA5 3926 aa8.52□□□□□ -1.05
TPCN1-201ENST00000335509 CSMD1Q96PZ7 3565 aa8.52□□□□□ -1.05
TPCN1-201ENST00000335509 XP32Q5T750 250 aa8.47□□□□□ -1.05
TPCN1-201ENST00000335509 OTOGQ6ZRI0 2925 aa8.46□□□□□ -1.06
TPCN1-201ENST00000335509 TNP1P09430 55 aa8.45□□□□□ -1.06
TPCN1-201ENST00000335509 C10orf95Q9H7T3 257 aa8.45□□□□□ -1.06
TPCN1-201ENST00000335509 KRTAP21-3Q3LHN1 58 aa8.42□□□□□ -1.06
TPCN1-201ENST00000335509 H0YAA0 97 aa8.42□□□□□ -1.06
TPCN1-201ENST00000335509 FBN3Q75N90 2809 aa8.41□□□□□ -1.06
TPCN1-201ENST00000335509 COL7A1Q02388 2944 aa8.35□□□□□ -1.07
TPCN1-201ENST00000335509 ZFHX3Q15911 3703 aa8.34□□□□□ -1.07
TPCN1-201ENST00000335509 SVEP1Q4LDE5 3571 aa8.33□□□□□ -1.08
TPCN1-201ENST00000335509 A0A1B0GVY2 172 aa8.3□□□□□ -1.08
TPCN1-201ENST00000335509 P0C880 135 aa8.27□□□□□ -1.08
TPCN1-201ENST00000335509 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
TPCN1-201ENST00000335509 MEGF8Q7Z7M0 2845 aa8.23□□□□□ -1.09
TPCN1-201ENST00000335509 TPRXLQ17RH7 258 aa8.21□□□□□ -1.1
TPCN1-201ENST00000335509 PP632Q6XCG6 107 aa8.18□□□□□ -1.1
TPCN1-201ENST00000335509 KRTAP13-3Q3SY46 172 aa8.18□□□□□ -1.1
TPCN1-201ENST00000335509 NBPF19A0A087WUL8 3843 aa8.12□□□□□ -1.11
TPCN1-201ENST00000335509 CSMD2Q7Z408 3487 aa8.06□□□□□ -1.12
TPCN1-201ENST00000335509 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
TPCN1-201ENST00000335509 VPS13CQ709C8 3753 aa7.96□□□□□ -1.14
TPCN1-201ENST00000335509 KRTAP12-2P59991 146 aa7.88□□□□□ -1.15
TPCN1-201ENST00000335509 ANK3Q12955 4377 aaKnown RBP7.87□□□□□ -1.15
TPCN1-201ENST00000335509 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
TPCN1-201ENST00000335509 TRRAPQ9Y4A5 3859 aa7.81□□□□□ -1.16
TPCN1-201ENST00000335509 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
TPCN1-201ENST00000335509 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
TPCN1-201ENST00000335509 ZNF469Q96JG9 3925 aaPredicted RBP7.7□□□□□ -1.18
TPCN1-201ENST00000335509 KRTAP13-4Q3LI77 160 aa7.65□□□□□ -1.18
TPCN1-201ENST00000335509 AKAP9Q99996 3911 aa7.65□□□□□ -1.18
TPCN1-201ENST00000335509 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
TPCN1-201ENST00000335509 MT1HL1P0DM35 61 aa7.4□□□□□ -1.23
TPCN1-201ENST00000335509 CSMD3Q7Z407 3707 aa7.36□□□□□ -1.23
TPCN1-201ENST00000335509 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
TPCN1-201ENST00000335509 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
TPCN1-201ENST00000335509 KRTAP15-1Q3LI76 137 aa7.29□□□□□ -1.24
TPCN1-201ENST00000335509 KRTAP10-4P60372 401 aaPredicted RBP7.22□□□□□ -1.25
TPCN1-201ENST00000335509 HUWE1Q7Z6Z7 4374 aaKnown RBP7.21□□□□□ -1.26
TPCN1-201ENST00000335509 KRTAP4-5Q9BYR2 181 aa7.17□□□□□ -1.26
TPCN1-201ENST00000335509 DNAH9Q9NYC9 4486 aa7.01□□□□□ -1.29
TPCN1-201ENST00000335509 CMYA5Q8N3K9 4069 aa7□□□□□ -1.29
TPCN1-201ENST00000335509 KRTAP10-12P60413 245 aa6.99□□□□□ -1.29
TPCN1-201ENST00000335509 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms