RNA–Protein interactions for RNA: ENST00000335464.9

TMEM104-201, Transcript of transmembrane protein 104, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM104, Length 4,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104-201ENST00000335464 KMT2BQ9UMN6 2715 aaPredicted RBP8.43□□□□□ -1.06
TMEM104-201ENST00000335464 PRAC1Q96KF2 57 aa8.43□□□□□ -1.06
TMEM104-201ENST00000335464 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
TMEM104-201ENST00000335464 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
TMEM104-201ENST00000335464 KRTAP13-1Q8IUC0 172 aa8.38□□□□□ -1.07
TMEM104-201ENST00000335464 DMAC1Q96GE9 116 aa8.38□□□□□ -1.07
TMEM104-201ENST00000335464 STAB2Q8WWQ8 2551 aa8.36□□□□□ -1.07
TMEM104-201ENST00000335464 TENM3Q9P273 2699 aa8.35□□□□□ -1.07
TMEM104-201ENST00000335464 A6NN06 94 aa8.34□□□□□ -1.07
TMEM104-201ENST00000335464 Q6ZRN7 208 aaPredicted RBP8.33□□□□□ -1.08
TMEM104-201ENST00000335464 VWFP04275 2813 aa8.32□□□□□ -1.08
TMEM104-201ENST00000335464 TENM1Q9UKZ4 2725 aa8.3□□□□□ -1.08
TMEM104-201ENST00000335464 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
TMEM104-201ENST00000335464 CSMD2Q7Z408 3487 aa8.28□□□□□ -1.08
TMEM104-201ENST00000335464 SMR3BP02814 79 aaPredicted RBP8.28□□□□□ -1.08
TMEM104-201ENST00000335464 PDZD2O15018 2839 aa8.26□□□□□ -1.09
TMEM104-201ENST00000335464 A0A1B0GU33 70 aa8.22□□□□□ -1.09
TMEM104-201ENST00000335464 KRTAP10-2P60368 255 aa8.21□□□□□ -1.09
TMEM104-201ENST00000335464 CSAG1Q6PB30 78 aa8.21□□□□□ -1.09
TMEM104-201ENST00000335464 VPS13CQ709C8 3753 aa8.2□□□□□ -1.1
TMEM104-201ENST00000335464 ZFHX3Q15911 3703 aa8.19□□□□□ -1.1
TMEM104-201ENST00000335464 TENM4Q6N022 2769 aa8.19□□□□□ -1.1
TMEM104-201ENST00000335464 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
TMEM104-201ENST00000335464 ASB16-AS1Q495Z4 193 aa8.18□□□□□ -1.1
TMEM104-201ENST00000335464 KRTAP10-1P60331 282 aa8.16□□□□□ -1.1
TMEM104-201ENST00000335464 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
TMEM104-201ENST00000335464 NBPF19A0A087WUL8 3843 aa8.16□□□□□ -1.1
TMEM104-201ENST00000335464 ANK3Q12955 4377 aaKnown RBP8.13□□□□□ -1.11
TMEM104-201ENST00000335464 A0A0D9SG42 100 aa8.12□□□□□ -1.11
TMEM104-201ENST00000335464 ADM2Q7Z4H4 148 aa8.11□□□□□ -1.11
TMEM104-201ENST00000335464 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
TMEM104-201ENST00000335464 KRTAP13-2Q52LG2 175 aa8.09□□□□□ -1.11
TMEM104-201ENST00000335464 PKD1L1Q8TDX9 2849 aa8.08□□□□□ -1.12
TMEM104-201ENST00000335464 OTOGQ6ZRI0 2925 aa8.04□□□□□ -1.12
TMEM104-201ENST00000335464 CRIPTQ9P021 101 aa8.03□□□□□ -1.12
TMEM104-201ENST00000335464 J3QL48 77 aa8.01□□□□□ -1.13
TMEM104-201ENST00000335464 H1FX-AS1Q4G0G2 97 aa8□□□□□ -1.13
TMEM104-201ENST00000335464 H3BS24 57 aa7.99□□□□□ -1.13
TMEM104-201ENST00000335464 DMBT1Q9UGM3 2413 aaPredicted RBP7.98□□□□□ -1.13
TMEM104-201ENST00000335464 FBN1P35555 2871 aaKnown RBP7.98□□□□□ -1.13
TMEM104-201ENST00000335464 TRRAPQ9Y4A5 3859 aa7.96□□□□□ -1.14
TMEM104-201ENST00000335464 AKAP9Q99996 3911 aa7.9□□□□□ -1.15
TMEM104-201ENST00000335464 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
TMEM104-201ENST00000335464 COX6B2Q6YFQ2 88 aa7.88□□□□□ -1.15
TMEM104-201ENST00000335464 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
TMEM104-201ENST00000335464 ZNF469Q96JG9 3925 aaPredicted RBP7.86□□□□□ -1.15
TMEM104-201ENST00000335464 S4R3F8 94 aa7.86□□□□□ -1.15
TMEM104-201ENST00000335464 RPS29P62273 56 aaKnown RBP7.85□□□□□ -1.15
TMEM104-201ENST00000335464 ROMO1P60602 79 aa7.85□□□□□ -1.15
TMEM104-201ENST00000335464 KRTAP16-1A8MUX0 517 aa7.83□□□□□ -1.16
TMEM104-201ENST00000335464 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
TMEM104-201ENST00000335464 SRRM2Q9UQ35 2752 aaKnown RBP7.82□□□□□ -1.16
TMEM104-201ENST00000335464 KRTAP1-4P0C5Y4 121 aa7.81□□□□□ -1.16
TMEM104-201ENST00000335464 TGP01266 2768 aa7.81□□□□□ -1.16
TMEM104-201ENST00000335464 Q6ZSA8 131 aa7.77□□□□□ -1.16
TMEM104-201ENST00000335464 TENM2Q9NT68 2774 aa7.77□□□□□ -1.17
TMEM104-201ENST00000335464 A8MUU9 505 aa7.73□□□□□ -1.17
TMEM104-201ENST00000335464 C20orf166-AS1Q96NR2 134 aa7.71□□□□□ -1.18
TMEM104-201ENST00000335464 H0YAA0 97 aa7.7□□□□□ -1.18
TMEM104-201ENST00000335464 Q5VSD8 79 aa7.62□□□□□ -1.19
TMEM104-201ENST00000335464 FBN3Q75N90 2809 aa7.55□□□□□ -1.2
TMEM104-201ENST00000335464 HUWE1Q7Z6Z7 4374 aaKnown RBP7.54□□□□□ -1.2
TMEM104-201ENST00000335464 R4GN34 69 aa7.54□□□□□ -1.2
TMEM104-201ENST00000335464 M0QZ58 72 aa7.5□□□□□ -1.21
TMEM104-201ENST00000335464 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
TMEM104-201ENST00000335464 MEGF8Q7Z7M0 2845 aa7.47□□□□□ -1.21
TMEM104-201ENST00000335464 LUZP6Q538Z0 58 aa7.44□□□□□ -1.22
TMEM104-201ENST00000335464 CSMD3Q7Z407 3707 aa7.44□□□□□ -1.22
TMEM104-201ENST00000335464 M0R2T5 61 aa7.4□□□□□ -1.22
TMEM104-201ENST00000335464 COL7A1Q02388 2944 aa7.4□□□□□ -1.23
TMEM104-201ENST00000335464 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
TMEM104-201ENST00000335464 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
TMEM104-201ENST00000335464 KRTAP3-1Q9BYR8 98 aa7.36□□□□□ -1.23
TMEM104-201ENST00000335464 XP32Q5T750 250 aa7.35□□□□□ -1.23
TMEM104-201ENST00000335464 SEC61BP60468 96 aaKnown RBP7.34□□□□□ -1.23
TMEM104-201ENST00000335464 DNAH10Q8IVF4 4471 aa7.31□□□□□ -1.24
TMEM104-201ENST00000335464 P0C880 135 aa7.29□□□□□ -1.24
TMEM104-201ENST00000335464 DNAH9Q9NYC9 4486 aa7.23□□□□□ -1.25
TMEM104-201ENST00000335464 PLECQ15149 4684 aaKnown RBP7.19□□□□□ -1.26
TMEM104-201ENST00000335464 A0A0A0MQY5 61 aa7.16□□□□□ -1.26
TMEM104-201ENST00000335464 A0A1B0GVY2 172 aa7.16□□□□□ -1.26
TMEM104-201ENST00000335464 DNAH1Q9P2D7 4330 aa7.15□□□□□ -1.26
TMEM104-201ENST00000335464 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
TMEM104-201ENST00000335464 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
TMEM104-201ENST00000335464 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
TMEM104-201ENST00000335464 KRTAP21-3Q3LHN1 58 aa7.11□□□□□ -1.27
TMEM104-201ENST00000335464 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
TMEM104-201ENST00000335464 KRTAP10-6P60371 365 aaPredicted RBP7.1□□□□□ -1.27
TMEM104-201ENST00000335464 DNAH17Q9UFH2 4485 aa7.03□□□□□ -1.28
TMEM104-201ENST00000335464 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
TMEM104-201ENST00000335464 VPS13DQ5THJ4 4388 aa7.02□□□□□ -1.29
TMEM104-201ENST00000335464 KRTAP12-1P59990 96 aa7.02□□□□□ -1.29
TMEM104-201ENST00000335464 DNAH8Q96JB1 4490 aa7.01□□□□□ -1.29
TMEM104-201ENST00000335464 ANK2Q01484 3957 aa7□□□□□ -1.29
TMEM104-201ENST00000335464 DNAH11Q96DT5 4516 aa6.98□□□□□ -1.29
TMEM104-201ENST00000335464 DNAH3Q8TD57 4116 aa6.97□□□□□ -1.29
TMEM104-201ENST00000335464 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
TMEM104-201ENST00000335464 KRTAP3-2Q9BYR7 98 aa6.95□□□□□ -1.3
TMEM104-201ENST00000335464 STARD9Q9P2P6 4700 aa6.94□□□□□ -1.3
TMEM104-201ENST00000335464 ALMS1Q8TCU4 4167 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms