RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 PRUNE2Q8WUY3 3088 aa9.24□□□□□ -0.93
PXN-203ENST00000323871 TENM4Q6N022 2769 aa9.22□□□□□ -0.93
PXN-203ENST00000323871 P0C880 135 aa9.19□□□□□ -0.94
PXN-203ENST00000323871 TRIOO75962 3097 aa9.18□□□□□ -0.94
PXN-203ENST00000323871 FLNCQ14315 2725 aa9.18□□□□□ -0.94
PXN-203ENST00000323871 UTP20O75691 2785 aaKnown RBP9.18□□□□□ -0.94
PXN-203ENST00000323871 XIRP2A4UGR9 3374 aa9.14□□□□□ -0.95
PXN-203ENST00000323871 UNC80Q8N2C7 3258 aa9.11□□□□□ -0.95
PXN-203ENST00000323871 APCP25054 2843 aa9.11□□□□□ -0.95
PXN-203ENST00000323871 NIPBLQ6KC79 2804 aaeCLIP9.06□□□□□ -0.96
PXN-203ENST00000323871 CDH23Q9H251 3354 aa9.04□□□□□ -0.96
PXN-203ENST00000323871 VPS13AQ96RL7 3174 aa9.03□□□□□ -0.96
PXN-203ENST00000323871 LRBAP50851 2863 aa9.01□□□□□ -0.97
PXN-203ENST00000323871 NBEAQ8NFP9 2946 aa9□□□□□ -0.97
PXN-203ENST00000323871 CELSR3Q9NYQ7 3312 aa8.98□□□□□ -0.97
PXN-203ENST00000323871 ATMQ13315 3056 aa8.98□□□□□ -0.97
PXN-203ENST00000323871 KALRNO60229 2985 aa8.98□□□□□ -0.97
PXN-203ENST00000323871 TACC2O95359 2948 aa8.97□□□□□ -0.97
PXN-203ENST00000323871 LAMA1P25391 3075 aa8.97□□□□□ -0.97
PXN-203ENST00000323871 COL12A1Q99715 3063 aa8.93□□□□□ -0.98
PXN-203ENST00000323871 EYSQ5T1H1 3165 aa8.89□□□□□ -0.99
PXN-203ENST00000323871 CRYBG3Q68DQ2 2970 aa8.88□□□□□ -0.99
PXN-203ENST00000323871 SZT2Q5T011 3432 aa8.86□□□□□ -0.99
PXN-203ENST00000323871 DMXL2Q8TDJ6 3036 aa8.84□□□□□ -0.99
PXN-203ENST00000323871 ASH1LQ9NR48 2969 aaKnown RBP8.82□□□□□ -1
PXN-203ENST00000323871 FRYLO94915 3013 aa8.79□□□□□ -1
PXN-203ENST00000323871 REV3LO60673 3130 aa8.79□□□□□ -1
PXN-203ENST00000323871 VCANP13611 3396 aa8.74□□□□□ -1.01
PXN-203ENST00000323871 TENM2Q9NT68 2774 aa8.71□□□□□ -1.01
PXN-203ENST00000323871 TNRC18O15417 2968 aaPredicted RBP8.71□□□□□ -1.01
PXN-203ENST00000323871 DNAH14Q0VDD8 3507 aa8.71□□□□□ -1.02
PXN-203ENST00000323871 CELSR2Q9HCU4 2923 aa8.68□□□□□ -1.02
PXN-203ENST00000323871 DCHS2Q6V1P9 2916 aa8.66□□□□□ -1.02
PXN-203ENST00000323871 ZZEF1O43149 2961 aa8.65□□□□□ -1.02
PXN-203ENST00000323871 ADGRG4Q8IZF6 3080 aa8.65□□□□□ -1.03
PXN-203ENST00000323871 TENM1Q9UKZ4 2725 aa8.63□□□□□ -1.03
PXN-203ENST00000323871 BOD1L1Q8NFC6 3051 aa8.62□□□□□ -1.03
PXN-203ENST00000323871 KRTAP13-4Q3LI77 160 aa8.6□□□□□ -1.03
PXN-203ENST00000323871 HRNRQ86YZ3 2850 aaPredicted RBP8.59□□□□□ -1.03
PXN-203ENST00000323871 CFAP47Q6ZTR5 3102 aa8.56□□□□□ -1.04
PXN-203ENST00000323871 KRTAP12-2P59991 146 aa8.55□□□□□ -1.04
PXN-203ENST00000323871 TENM3Q9P273 2699 aa8.54□□□□□ -1.04
PXN-203ENST00000323871 COL6A3P12111 3177 aa8.54□□□□□ -1.04
PXN-203ENST00000323871 NF1P21359 2839 aa8.53□□□□□ -1.04
PXN-203ENST00000323871 SPTBN5Q9NRC6 3674 aaKnown RBP8.52□□□□□ -1.05
PXN-203ENST00000323871 ZANQ9Y493 2812 aa8.52□□□□□ -1.05
PXN-203ENST00000323871 KRTAP12-1P59990 96 aa8.44□□□□□ -1.06
PXN-203ENST00000323871 KRTAP15-1Q3LI76 137 aa8.41□□□□□ -1.06
PXN-203ENST00000323871 KRTAP3-1Q9BYR8 98 aa8.39□□□□□ -1.07
PXN-203ENST00000323871 MXRA5Q9NR99 2828 aa8.39□□□□□ -1.07
PXN-203ENST00000323871 USP34Q70CQ2 3546 aa8.38□□□□□ -1.07
PXN-203ENST00000323871 TGP01266 2768 aa8.36□□□□□ -1.07
PXN-203ENST00000323871 MT1HL1P0DM35 61 aa8.33□□□□□ -1.08
PXN-203ENST00000323871 DMXL1Q9Y485 3027 aa8.31□□□□□ -1.08
PXN-203ENST00000323871 SPEGQ15772 3267 aa8.29□□□□□ -1.08
PXN-203ENST00000323871 PDZD2O15018 2839 aa8.28□□□□□ -1.08
PXN-203ENST00000323871 CELSR1Q9NYQ6 3014 aa8.27□□□□□ -1.08
PXN-203ENST00000323871 FBN2P35556 2912 aa8.25□□□□□ -1.09
PXN-203ENST00000323871 KRTAP10-6P60371 365 aaPredicted RBP8.14□□□□□ -1.11
PXN-203ENST00000323871 INE1O15225 51 aa8.11□□□□□ -1.11
PXN-203ENST00000323871 LOC400499M0QZD8 3231 aa8.1□□□□□ -1.11
PXN-203ENST00000323871 PKD1L1Q8TDX9 2849 aa8.06□□□□□ -1.12
PXN-203ENST00000323871 KRTAP10-4P60372 401 aaPredicted RBP8.05□□□□□ -1.12
PXN-203ENST00000323871 MYO15AQ9UKN7 3530 aa8.05□□□□□ -1.12
PXN-203ENST00000323871 ANK3Q12955 4377 aaKnown RBP8.03□□□□□ -1.12
PXN-203ENST00000323871 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
PXN-203ENST00000323871 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
PXN-203ENST00000323871 OTOGQ6ZRI0 2925 aa7.96□□□□□ -1.14
PXN-203ENST00000323871 VWFP04275 2813 aa7.93□□□□□ -1.14
PXN-203ENST00000323871 ALMS1Q8TCU4 4167 aa7.91□□□□□ -1.14
PXN-203ENST00000323871 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
PXN-203ENST00000323871 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
PXN-203ENST00000323871 NBPF19A0A087WUL8 3843 aa7.8□□□□□ -1.16
PXN-203ENST00000323871 RELNP78509 3460 aa7.8□□□□□ -1.16
PXN-203ENST00000323871 WDFY3Q8IZQ1 3526 aa7.79□□□□□ -1.16
PXN-203ENST00000323871 DCHS1Q96JQ0 3298 aa7.78□□□□□ -1.16
PXN-203ENST00000323871 FBN1P35555 2871 aaKnown RBP7.74□□□□□ -1.17
PXN-203ENST00000323871 HUWE1Q7Z6Z7 4374 aaKnown RBP7.74□□□□□ -1.17
PXN-203ENST00000323871 KRTAP23-1A1A580 65 aa7.74□□□□□ -1.17
PXN-203ENST00000323871 SRRM2Q9UQ35 2752 aaKnown RBP7.72□□□□□ -1.17
PXN-203ENST00000323871 CRCT1Q9UGL9 99 aa7.71□□□□□ -1.18
PXN-203ENST00000323871 KRTAP12-3P60328 96 aa7.7□□□□□ -1.18
PXN-203ENST00000323871 FBN3Q75N90 2809 aa7.68□□□□□ -1.18
PXN-203ENST00000323871 LAMA5O15230 3695 aa7.67□□□□□ -1.18
PXN-203ENST00000323871 ASPMQ8IZT6 3477 aa7.67□□□□□ -1.18
PXN-203ENST00000323871 ZFHX4Q86UP3 3567 aa7.62□□□□□ -1.19
PXN-203ENST00000323871 ZFHX3Q15911 3703 aa7.62□□□□□ -1.19
PXN-203ENST00000323871 DMDP11532 3685 aa7.6□□□□□ -1.19
PXN-203ENST00000323871 CSMD1Q96PZ7 3565 aa7.57□□□□□ -1.2
PXN-203ENST00000323871 MUC3AQ02505 3323 aa7.56□□□□□ -1.2
PXN-203ENST00000323871 LCE3AQ5TA76 89 aa7.53□□□□□ -1.2
PXN-203ENST00000323871 MEGF8Q7Z7M0 2845 aa7.53□□□□□ -1.2
PXN-203ENST00000323871 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.21
PXN-203ENST00000323871 SMG1Q96Q15 3661 aaKnown RBP7.38□□□□□ -1.23
PXN-203ENST00000323871 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
PXN-203ENST00000323871 MT1HP80294 61 aa7.33□□□□□ -1.24
PXN-203ENST00000323871 CUBNO60494 3623 aa7.33□□□□□ -1.24
PXN-203ENST00000323871 COL7A1Q02388 2944 aa7.3□□□□□ -1.24
PXN-203ENST00000323871 DNAH1Q9P2D7 4330 aa7.28□□□□□ -1.24
PXN-203ENST00000323871 SVEP1Q4LDE5 3571 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms