RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 UNC80Q8N2C7 3258 aa6.5□□□□□ -1.37
FARP1-201ENST00000319562 HIVEP1P15822 2718 aa6.49□□□□□ -1.37
FARP1-201ENST00000319562 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
FARP1-201ENST00000319562 CRYBG3Q68DQ2 2970 aa6.47□□□□□ -1.37
FARP1-201ENST00000319562 COL12A1Q99715 3063 aa6.46□□□□□ -1.38
FARP1-201ENST00000319562 CHD9Q3L8U1 2897 aa6.42□□□□□ -1.38
FARP1-201ENST00000319562 XP32Q5T750 250 aa6.4□□□□□ -1.39
FARP1-201ENST00000319562 CELSR2Q9HCU4 2923 aa6.38□□□□□ -1.39
FARP1-201ENST00000319562 TENM1Q9UKZ4 2725 aa6.37□□□□□ -1.39
FARP1-201ENST00000319562 TENM3Q9P273 2699 aa6.36□□□□□ -1.39
FARP1-201ENST00000319562 LAMA3Q16787 3333 aa6.35□□□□□ -1.39
FARP1-201ENST00000319562 TGP01266 2768 aa6.34□□□□□ -1.39
FARP1-201ENST00000319562 A0A1B0GVY2 172 aa6.33□□□□□ -1.4
FARP1-201ENST00000319562 LAMA1P25391 3075 aa6.32□□□□□ -1.4
FARP1-201ENST00000319562 NBEAQ8NFP9 2946 aa6.32□□□□□ -1.4
FARP1-201ENST00000319562 NF1P21359 2839 aa6.31□□□□□ -1.4
FARP1-201ENST00000319562 TPRXLQ17RH7 258 aa6.31□□□□□ -1.4
FARP1-201ENST00000319562 NIPBLQ6KC79 2804 aaeCLIP6.3□□□□□ -1.4
FARP1-201ENST00000319562 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
FARP1-201ENST00000319562 TACC2O95359 2948 aa6.29□□□□□ -1.4
FARP1-201ENST00000319562 FLNCQ14315 2725 aa6.28□□□□□ -1.4
FARP1-201ENST00000319562 BOD1L1Q8NFC6 3051 aa6.28□□□□□ -1.4
FARP1-201ENST00000319562 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
FARP1-201ENST00000319562 DNAH14Q0VDD8 3507 aa6.25□□□□□ -1.41
FARP1-201ENST00000319562 HTTP42858 3142 aa6.24□□□□□ -1.41
FARP1-201ENST00000319562 COL6A3P12111 3177 aa6.23□□□□□ -1.41
FARP1-201ENST00000319562 DCHS2Q6V1P9 2916 aa6.22□□□□□ -1.41
FARP1-201ENST00000319562 BRCA2P51587 3418 aa6.22□□□□□ -1.41
FARP1-201ENST00000319562 ZZEF1O43149 2961 aa6.21□□□□□ -1.42
FARP1-201ENST00000319562 ADGRG4Q8IZF6 3080 aa6.21□□□□□ -1.42
FARP1-201ENST00000319562 CFAP47Q6ZTR5 3102 aa6.18□□□□□ -1.42
FARP1-201ENST00000319562 TENM4Q6N022 2769 aa6.16□□□□□ -1.42
FARP1-201ENST00000319562 ATMQ13315 3056 aa6.16□□□□□ -1.42
FARP1-201ENST00000319562 PDZD2O15018 2839 aa6.15□□□□□ -1.42
FARP1-201ENST00000319562 KRTAP21-3Q3LHN1 58 aa6.14□□□□□ -1.43
FARP1-201ENST00000319562 USP34Q70CQ2 3546 aa6.14□□□□□ -1.43
FARP1-201ENST00000319562 TNRC18O15417 2968 aaPredicted RBP6.14□□□□□ -1.43
FARP1-201ENST00000319562 KRTAP13-4Q3LI77 160 aa6.12□□□□□ -1.43
FARP1-201ENST00000319562 KRTAP13-3Q3SY46 172 aa6.12□□□□□ -1.43
FARP1-201ENST00000319562 DMXL1Q9Y485 3027 aa6.11□□□□□ -1.43
FARP1-201ENST00000319562 VCANP13611 3396 aa6.1□□□□□ -1.43
FARP1-201ENST00000319562 CDH23Q9H251 3354 aa6.1□□□□□ -1.43
FARP1-201ENST00000319562 KRTAP12-2P59991 146 aa6.1□□□□□ -1.43
FARP1-201ENST00000319562 CELSR1Q9NYQ6 3014 aa6.09□□□□□ -1.43
FARP1-201ENST00000319562 SPEGQ15772 3267 aa6.07□□□□□ -1.44
FARP1-201ENST00000319562 FBN2P35556 2912 aa6.02□□□□□ -1.45
FARP1-201ENST00000319562 ZANQ9Y493 2812 aa6.01□□□□□ -1.45
FARP1-201ENST00000319562 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
FARP1-201ENST00000319562 INE1O15225 51 aa5.94□□□□□ -1.46
FARP1-201ENST00000319562 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
FARP1-201ENST00000319562 VWFP04275 2813 aa5.9□□□□□ -1.46
FARP1-201ENST00000319562 PKD1L1Q8TDX9 2849 aa5.9□□□□□ -1.46
FARP1-201ENST00000319562 TENM2Q9NT68 2774 aa5.85□□□□□ -1.47
FARP1-201ENST00000319562 HRNRQ86YZ3 2850 aaPredicted RBP5.85□□□□□ -1.47
FARP1-201ENST00000319562 MXRA5Q9NR99 2828 aa5.84□□□□□ -1.47
FARP1-201ENST00000319562 SRRM2Q9UQ35 2752 aaKnown RBP5.84□□□□□ -1.47
FARP1-201ENST00000319562 SZT2Q5T011 3432 aa5.84□□□□□ -1.47
FARP1-201ENST00000319562 EYSQ5T1H1 3165 aa5.78□□□□□ -1.48
FARP1-201ENST00000319562 ZFHX4Q86UP3 3567 aa5.77□□□□□ -1.49
FARP1-201ENST00000319562 SPTBN5Q9NRC6 3674 aaKnown RBP5.68□□□□□ -1.5
FARP1-201ENST00000319562 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
FARP1-201ENST00000319562 MYO15AQ9UKN7 3530 aa5.67□□□□□ -1.5
FARP1-201ENST00000319562 WDFY3Q8IZQ1 3526 aa5.67□□□□□ -1.5
FARP1-201ENST00000319562 COL7A1Q02388 2944 aa5.67□□□□□ -1.5
FARP1-201ENST00000319562 LOC400499M0QZD8 3231 aa5.67□□□□□ -1.5
FARP1-201ENST00000319562 NBPF19A0A087WUL8 3843 aa5.66□□□□□ -1.5
FARP1-201ENST00000319562 MEGF8Q7Z7M0 2845 aa5.65□□□□□ -1.5
FARP1-201ENST00000319562 KRTAP10-6P60371 365 aaPredicted RBP5.63□□□□□ -1.51
FARP1-201ENST00000319562 ASPMQ8IZT6 3477 aa5.57□□□□□ -1.52
FARP1-201ENST00000319562 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
FARP1-201ENST00000319562 FBN3Q75N90 2809 aa5.53□□□□□ -1.52
FARP1-201ENST00000319562 DCHS1Q96JQ0 3298 aa5.51□□□□□ -1.53
FARP1-201ENST00000319562 LAMA5O15230 3695 aa5.47□□□□□ -1.53
FARP1-201ENST00000319562 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
FARP1-201ENST00000319562 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
FARP1-201ENST00000319562 CSMD1Q96PZ7 3565 aa5.44□□□□□ -1.54
FARP1-201ENST00000319562 ZFHX3Q15911 3703 aa5.4□□□□□ -1.54
FARP1-201ENST00000319562 RELNP78509 3460 aa5.39□□□□□ -1.55
FARP1-201ENST00000319562 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
FARP1-201ENST00000319562 FBN1P35555 2871 aaKnown RBP5.36□□□□□ -1.55
FARP1-201ENST00000319562 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
FARP1-201ENST00000319562 SMG1Q96Q15 3661 aaKnown RBP5.34□□□□□ -1.55
FARP1-201ENST00000319562 KRTAP3-3Q9BYR6 98 aa5.32□□□□□ -1.56
FARP1-201ENST00000319562 SPENQ96T58 3664 aaKnown RBP5.29□□□□□ -1.56
FARP1-201ENST00000319562 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
FARP1-201ENST00000319562 OTOGQ6ZRI0 2925 aa5.21□□□□□ -1.58
FARP1-201ENST00000319562 TRRAPQ9Y4A5 3859 aa5.2□□□□□ -1.58
FARP1-201ENST00000319562 DMDP11532 3685 aa5.19□□□□□ -1.58
FARP1-201ENST00000319562 KRTAP10-5P60370 271 aa5.19□□□□□ -1.58
FARP1-201ENST00000319562 MT1HL1P0DM35 61 aa5.13□□□□□ -1.59
FARP1-201ENST00000319562 CUBNO60494 3623 aa5.12□□□□□ -1.59
FARP1-201ENST00000319562 SVEP1Q4LDE5 3571 aa5.09□□□□□ -1.6
FARP1-201ENST00000319562 MUC3AQ02505 3323 aa5.07□□□□□ -1.6
FARP1-201ENST00000319562 VPS13CQ709C8 3753 aa5.05□□□□□ -1.6
FARP1-201ENST00000319562 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
FARP1-201ENST00000319562 CSMD3Q7Z407 3707 aa5□□□□□ -1.61
FARP1-201ENST00000319562 ALMS1Q8TCU4 4167 aa4.93□□□□□ -1.62
FARP1-201ENST00000319562 LORP23490 312 aaPredicted RBP4.9□□□□□ -1.63
FARP1-201ENST00000319562 ANK3Q12955 4377 aaKnown RBP4.89□□□□□ -1.63
FARP1-201ENST00000319562 KRTAP10-4P60372 401 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms