RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SERP1Q9Y6X1 66 aa2.17□□□□□ -2.06
SMCO3-201ENST00000316048 NBEAL1Q6ZS30 2694 aa2.16□□□□□ -2.06
SMCO3-201ENST00000316048 A0A087WTM6 91 aa2.16□□□□□ -2.06
SMCO3-201ENST00000316048 TRBV7-7A0A0K0K1E9 115 aa2.16□□□□□ -2.06
SMCO3-201ENST00000316048 A0A1W2PNN7 141 aa2.16□□□□□ -2.06
SMCO3-201ENST00000316048 A6NED7 52 aa2.16□□□□□ -2.06
SMCO3-201ENST00000316048 C1orf134Q5TEV5 83 aa2.16□□□□□ -2.06
SMCO3-201ENST00000316048 Q6ZQT0 140 aa2.16□□□□□ -2.06
SMCO3-201ENST00000316048 LINC00846Q9NV44 126 aa2.16□□□□□ -2.06
SMCO3-201ENST00000316048 HUWE1Q7Z6Z7 4374 aaKnown RBP2.16□□□□□ -2.06
SMCO3-201ENST00000316048 TRBV7-4A0A0J9YYF1 115 aa2.15□□□□□ -2.06
SMCO3-201ENST00000316048 LY6G6CO95867 125 aa2.15□□□□□ -2.06
SMCO3-201ENST00000316048 Q6JHZ5 121 aa2.15□□□□□ -2.06
SMCO3-201ENST00000316048 SMCR5Q8TEV8 140 aa2.15□□□□□ -2.06
SMCO3-201ENST00000316048 A0A1B0GW54 56 aa2.15□□□□□ -2.07
SMCO3-201ENST00000316048 C3orf84H3BNL1 204 aa2.15□□□□□ -2.07
SMCO3-201ENST00000316048 K7ERS5 55 aa2.15□□□□□ -2.07
SMCO3-201ENST00000316048 COX7CP15954 63 aa2.15□□□□□ -2.07
SMCO3-201ENST00000316048 ATP5EP2Q5VTU8 51 aa2.15□□□□□ -2.07
SMCO3-201ENST00000316048 Q9BRP9 147 aa2.15□□□□□ -2.07
SMCO3-201ENST00000316048 IGLV5-48A0A075B6I7 105 aa2.14□□□□□ -2.07
SMCO3-201ENST00000316048 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
SMCO3-201ENST00000316048 F8WEM9 126 aa2.14□□□□□ -2.07
SMCO3-201ENST00000316048 IGKV3D-7A0A0C4DH55 119 aa2.14□□□□□ -2.07
SMCO3-201ENST00000316048 RTL8CO15255 209 aa2.14□□□□□ -2.07
SMCO3-201ENST00000316048 FUSP35637 526 aaKnown RBP eCLIP2.14□□□□□ -2.07
SMCO3-201ENST00000316048 HAMPP81172 84 aa2.14□□□□□ -2.07
SMCO3-201ENST00000316048 C1orf64Q8NEQ6 169 aa2.14□□□□□ -2.07
SMCO3-201ENST00000316048 HIGD2AQ9BW72 106 aa2.14□□□□□ -2.07
SMCO3-201ENST00000316048 ERC2-IT1O76042 136 aa2.13□□□□□ -2.07
SMCO3-201ENST00000316048 HIST1H4AP62805 103 aaKnown RBP2.13□□□□□ -2.07
SMCO3-201ENST00000316048 PRLHP81277 87 aa2.13□□□□□ -2.07
SMCO3-201ENST00000316048 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
SMCO3-201ENST00000316048 SCXQ7RTU7 201 aa2.13□□□□□ -2.07
SMCO3-201ENST00000316048 SPACA4Q8TDM5 124 aa2.13□□□□□ -2.07
SMCO3-201ENST00000316048 CYSTM1Q9H1C7 97 aa2.13□□□□□ -2.07
SMCO3-201ENST00000316048 R4GN34 69 aa2.13□□□□□ -2.07
SMCO3-201ENST00000316048 BCE1O60756 84 aa2.12□□□□□ -2.07
SMCO3-201ENST00000316048 NREPQ16612 68 aa2.12□□□□□ -2.07
SMCO3-201ENST00000316048 KRTAP25-1Q3LHN0 102 aa2.12□□□□□ -2.07
SMCO3-201ENST00000316048 C1orf137Q5JT78 98 aa2.12□□□□□ -2.07
SMCO3-201ENST00000316048 C7orf65Q6ZTY9 151 aa2.12□□□□□ -2.07
SMCO3-201ENST00000316048 DNAH9Q9NYC9 4486 aa2.12□□□□□ -2.07
SMCO3-201ENST00000316048 COL7A1Q02388 2944 aa2.12□□□□□ -2.07
SMCO3-201ENST00000316048 KRTAP10-8P60410 259 aa2.12□□□□□ -2.07
SMCO3-201ENST00000316048 PLAC8Q9NZF1 115 aa2.12□□□□□ -2.07
SMCO3-201ENST00000316048 A6NN06 94 aa2.11□□□□□ -2.07
SMCO3-201ENST00000316048 ATOX1O00244 68 aa2.11□□□□□ -2.07
SMCO3-201ENST00000316048 SPRR1BP22528 89 aa2.11□□□□□ -2.07
SMCO3-201ENST00000316048 STAB2Q8WWQ8 2551 aa2.11□□□□□ -2.07
SMCO3-201ENST00000316048 KRTAP13-3Q3SY46 172 aa2.11□□□□□ -2.07
SMCO3-201ENST00000316048 SPRR4Q96PI1 79 aa2.11□□□□□ -2.07
SMCO3-201ENST00000316048 A0A1W2PNM2 257 aa2.1□□□□□ -2.07
SMCO3-201ENST00000316048 HRES1P13985 223 aa2.1□□□□□ -2.07
SMCO3-201ENST00000316048 A0A087WVE0 104 aa2.09□□□□□ -2.07
SMCO3-201ENST00000316048 KRTAP13-1Q8IUC0 172 aa2.09□□□□□ -2.07
SMCO3-201ENST00000316048 PSORS1C2Q9UIG4 136 aa2.09□□□□□ -2.07
SMCO3-201ENST00000316048 DYNC2H1Q8NCM8 4307 aaKnown RBP2.09□□□□□ -2.08
SMCO3-201ENST00000316048 RPL37AP61513 92 aaKnown RBP2.09□□□□□ -2.08
SMCO3-201ENST00000316048 DNAH1Q9P2D7 4330 aa2.09□□□□□ -2.08
SMCO3-201ENST00000316048 SERP2Q8N6R1 65 aa2.08□□□□□ -2.08
SMCO3-201ENST00000316048 CSMD3Q7Z407 3707 aa2.08□□□□□ -2.08
SMCO3-201ENST00000316048 LINC00304Q8N9R0 145 aa2.08□□□□□ -2.08
SMCO3-201ENST00000316048 MEGF8Q7Z7M0 2845 aa2.07□□□□□ -2.08
SMCO3-201ENST00000316048 A0A087WSZ3 146 aa2.07□□□□□ -2.08
SMCO3-201ENST00000316048 PLECQ15149 4684 aaKnown RBP2.07□□□□□ -2.08
SMCO3-201ENST00000316048 TRAV7A0A075B6U4 112 aa2.06□□□□□ -2.08
SMCO3-201ENST00000316048 DNAH7Q8WXX0 4024 aa2.06□□□□□ -2.08
SMCO3-201ENST00000316048 A0A0G2JQZ4 141 aa2.06□□□□□ -2.08
SMCO3-201ENST00000316048 IGKV4-1P06312 121 aa2.06□□□□□ -2.08
SMCO3-201ENST00000316048 KRTAP10-1P60331 282 aa2.06□□□□□ -2.08
SMCO3-201ENST00000316048 ATP11AUNQ6ZP68 121 aa2.06□□□□□ -2.08
SMCO3-201ENST00000316048 Q6ZSA8 131 aa2.06□□□□□ -2.08
SMCO3-201ENST00000316048 STARD9Q9P2P6 4700 aa2.06□□□□□ -2.08
SMCO3-201ENST00000316048 TENM2Q9NT68 2774 aa2.06□□□□□ -2.08
SMCO3-201ENST00000316048 LYSTQ99698 3801 aa2.05□□□□□ -2.08
SMCO3-201ENST00000316048 LCE6AA0A183 80 aa2.05□□□□□ -2.08
SMCO3-201ENST00000316048 NDUFB1O75438 58 aa2.05□□□□□ -2.08
SMCO3-201ENST00000316048 SSBP3-AS1Q7Z2R9 100 aa2.05□□□□□ -2.08
SMCO3-201ENST00000316048 DNHD1Q96M86 4753 aa2.04□□□□□ -2.08
SMCO3-201ENST00000316048 PRKDCP78527 4128 aaKnown RBP2.04□□□□□ -2.08
SMCO3-201ENST00000316048 K7EQZ3 153 aa2.04□□□□□ -2.08
SMCO3-201ENST00000316048 LINC00472Q9H8W2 130 aa2.04□□□□□ -2.08
SMCO3-201ENST00000316048 DNAH10Q8IVF4 4471 aa2.04□□□□□ -2.08
SMCO3-201ENST00000316048 VPS13DQ5THJ4 4388 aa2.04□□□□□ -2.08
SMCO3-201ENST00000316048 HCG22E2RYF7 251 aa2.03□□□□□ -2.08
SMCO3-201ENST00000316048 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
SMCO3-201ENST00000316048 FBN3Q75N90 2809 aa2.03□□□□□ -2.08
SMCO3-201ENST00000316048 FAM229BQ4G0N7 80 aa2.03□□□□□ -2.08
SMCO3-201ENST00000316048 C20orf197Q8N268 126 aa2.03□□□□□ -2.08
SMCO3-201ENST00000316048 A0A1B0GU33 70 aa2.02□□□□□ -2.09
SMCO3-201ENST00000316048 NDUFC1O43677 76 aa2.02□□□□□ -2.09
SMCO3-201ENST00000316048 KRTAP10-10P60014 251 aa2.02□□□□□ -2.09
SMCO3-201ENST00000316048 Q1T7F1 81 aa2.02□□□□□ -2.09
SMCO3-201ENST00000316048 RETNLBQ9BQ08 111 aa2.02□□□□□ -2.09
SMCO3-201ENST00000316048 KLKP1Q107X0 134 aa2.02□□□□□ -2.09
SMCO3-201ENST00000316048 CASC2Q6XLA1 102 aa2.02□□□□□ -2.09
SMCO3-201ENST00000316048 WFDC13Q8IUB5 93 aa2.02□□□□□ -2.09
SMCO3-201ENST00000316048 H7BZZ5 65 aa2.01□□□□□ -2.09
SMCO3-201ENST00000316048 ATP5EP56381 51 aaPredicted RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms