RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 XIRP2A4UGR9 3374 aa10.83□□□□□ -0.68
SH3RF3-201ENST00000309415 TACC2O95359 2948 aa10.82□□□□□ -0.68
SH3RF3-201ENST00000309415 CRYBG3Q68DQ2 2970 aa10.82□□□□□ -0.68
SH3RF3-201ENST00000309415 REV3LO60673 3130 aa10.81□□□□□ -0.68
SH3RF3-201ENST00000309415 APCP25054 2843 aa10.8□□□□□ -0.68
SH3RF3-201ENST00000309415 KRTAP13-3Q3SY46 172 aa10.79□□□□□ -0.68
SH3RF3-201ENST00000309415 FLNCQ14315 2725 aa10.77□□□□□ -0.69
SH3RF3-201ENST00000309415 UNC80Q8N2C7 3258 aa10.77□□□□□ -0.69
SH3RF3-201ENST00000309415 VPS13AQ96RL7 3174 aa10.75□□□□□ -0.69
SH3RF3-201ENST00000309415 ATMQ13315 3056 aa10.73□□□□□ -0.69
SH3RF3-201ENST00000309415 COL12A1Q99715 3063 aa10.69□□□□□ -0.7
SH3RF3-201ENST00000309415 LRBAP50851 2863 aa10.68□□□□□ -0.7
SH3RF3-201ENST00000309415 KALRNO60229 2985 aa10.66□□□□□ -0.7
SH3RF3-201ENST00000309415 CDH23Q9H251 3354 aa10.6□□□□□ -0.71
SH3RF3-201ENST00000309415 DMXL2Q8TDJ6 3036 aa10.59□□□□□ -0.71
SH3RF3-201ENST00000309415 H0YAA0 97 aa10.58□□□□□ -0.72
SH3RF3-201ENST00000309415 NIPBLQ6KC79 2804 aaeCLIP10.57□□□□□ -0.72
SH3RF3-201ENST00000309415 CELSR3Q9NYQ7 3312 aa10.57□□□□□ -0.72
SH3RF3-201ENST00000309415 LAMA1P25391 3075 aa10.56□□□□□ -0.72
SH3RF3-201ENST00000309415 FRYLO94915 3013 aa10.54□□□□□ -0.72
SH3RF3-201ENST00000309415 FREM2Q5SZK8 3169 aa10.5□□□□□ -0.73
SH3RF3-201ENST00000309415 P0C880 135 aa10.5□□□□□ -0.73
SH3RF3-201ENST00000309415 ASH1LQ9NR48 2969 aaKnown RBP10.49□□□□□ -0.73
SH3RF3-201ENST00000309415 EYSQ5T1H1 3165 aa10.48□□□□□ -0.73
SH3RF3-201ENST00000309415 CELSR2Q9HCU4 2923 aa10.41□□□□□ -0.74
SH3RF3-201ENST00000309415 COL6A3P12111 3177 aa10.37□□□□□ -0.75
SH3RF3-201ENST00000309415 SZT2Q5T011 3432 aa10.36□□□□□ -0.75
SH3RF3-201ENST00000309415 ADGRG4Q8IZF6 3080 aa10.36□□□□□ -0.75
SH3RF3-201ENST00000309415 DCHS2Q6V1P9 2916 aa10.33□□□□□ -0.76
SH3RF3-201ENST00000309415 TENM2Q9NT68 2774 aa10.33□□□□□ -0.76
SH3RF3-201ENST00000309415 BOD1L1Q8NFC6 3051 aa10.32□□□□□ -0.76
SH3RF3-201ENST00000309415 ZZEF1O43149 2961 aa10.31□□□□□ -0.76
SH3RF3-201ENST00000309415 NBEAQ8NFP9 2946 aa10.3□□□□□ -0.76
SH3RF3-201ENST00000309415 TENM1Q9UKZ4 2725 aa10.29□□□□□ -0.76
SH3RF3-201ENST00000309415 VCANP13611 3396 aa10.23□□□□□ -0.77
SH3RF3-201ENST00000309415 CFAP47Q6ZTR5 3102 aa10.23□□□□□ -0.77
SH3RF3-201ENST00000309415 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
SH3RF3-201ENST00000309415 NF1P21359 2839 aa10.13□□□□□ -0.79
SH3RF3-201ENST00000309415 DNAH14Q0VDD8 3507 aa10.11□□□□□ -0.79
SH3RF3-201ENST00000309415 TNRC18O15417 2968 aaPredicted RBP10.1□□□□□ -0.79
SH3RF3-201ENST00000309415 ZANQ9Y493 2812 aa10.08□□□□□ -0.8
SH3RF3-201ENST00000309415 USP34Q70CQ2 3546 aa10.08□□□□□ -0.8
SH3RF3-201ENST00000309415 KRTAP12-2P59991 146 aa10.07□□□□□ -0.8
SH3RF3-201ENST00000309415 HRNRQ86YZ3 2850 aaPredicted RBP10□□□□□ -0.81
SH3RF3-201ENST00000309415 KRTAP13-4Q3LI77 160 aa10□□□□□ -0.81
SH3RF3-201ENST00000309415 SPEGQ15772 3267 aa9.93□□□□□ -0.82
SH3RF3-201ENST00000309415 TGP01266 2768 aa9.91□□□□□ -0.82
SH3RF3-201ENST00000309415 DMXL1Q9Y485 3027 aa9.89□□□□□ -0.83
SH3RF3-201ENST00000309415 SPTBN5Q9NRC6 3674 aaKnown RBP9.88□□□□□ -0.83
SH3RF3-201ENST00000309415 CELSR1Q9NYQ6 3014 aa9.87□□□□□ -0.83
SH3RF3-201ENST00000309415 KRTAP12-1P59990 96 aa9.85□□□□□ -0.83
SH3RF3-201ENST00000309415 FBN2P35556 2912 aa9.85□□□□□ -0.83
SH3RF3-201ENST00000309415 MXRA5Q9NR99 2828 aa9.8□□□□□ -0.84
SH3RF3-201ENST00000309415 PKD1L1Q8TDX9 2849 aa9.78□□□□□ -0.84
SH3RF3-201ENST00000309415 KRTAP15-1Q3LI76 137 aa9.77□□□□□ -0.85
SH3RF3-201ENST00000309415 KRTAP3-1Q9BYR8 98 aa9.75□□□□□ -0.85
SH3RF3-201ENST00000309415 VWFP04275 2813 aa9.64□□□□□ -0.87
SH3RF3-201ENST00000309415 PDZD2O15018 2839 aa9.58□□□□□ -0.88
SH3RF3-201ENST00000309415 MT1HL1P0DM35 61 aa9.58□□□□□ -0.88
SH3RF3-201ENST00000309415 LOC400499M0QZD8 3231 aa9.47□□□□□ -0.89
SH3RF3-201ENST00000309415 KRTAP10-6P60371 365 aaPredicted RBP9.45□□□□□ -0.9
SH3RF3-201ENST00000309415 MYO15AQ9UKN7 3530 aa9.42□□□□□ -0.9
SH3RF3-201ENST00000309415 NBPF19A0A087WUL8 3843 aa9.41□□□□□ -0.9
SH3RF3-201ENST00000309415 KRTAP4-5Q9BYR2 181 aa9.36□□□□□ -0.91
SH3RF3-201ENST00000309415 CRCT1Q9UGL9 99 aa9.36□□□□□ -0.91
SH3RF3-201ENST00000309415 WDFY3Q8IZQ1 3526 aa9.36□□□□□ -0.91
SH3RF3-201ENST00000309415 KRTAP10-12P60413 245 aa9.35□□□□□ -0.91
SH3RF3-201ENST00000309415 DCHS1Q96JQ0 3298 aa9.28□□□□□ -0.92
SH3RF3-201ENST00000309415 RELNP78509 3460 aa9.27□□□□□ -0.93
SH3RF3-201ENST00000309415 OTOGQ6ZRI0 2925 aa9.23□□□□□ -0.93
SH3RF3-201ENST00000309415 ANK3Q12955 4377 aaKnown RBP9.23□□□□□ -0.93
SH3RF3-201ENST00000309415 KRTAP10-4P60372 401 aaPredicted RBP9.16□□□□□ -0.94
SH3RF3-201ENST00000309415 FBN3Q75N90 2809 aa9.14□□□□□ -0.95
SH3RF3-201ENST00000309415 ASPMQ8IZT6 3477 aa9.11□□□□□ -0.95
SH3RF3-201ENST00000309415 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
SH3RF3-201ENST00000309415 FBN1P35555 2871 aaKnown RBP9.1□□□□□ -0.95
SH3RF3-201ENST00000309415 SRRM2Q9UQ35 2752 aaKnown RBP9.09□□□□□ -0.95
SH3RF3-201ENST00000309415 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
SH3RF3-201ENST00000309415 ZFHX3Q15911 3703 aa9.05□□□□□ -0.96
SH3RF3-201ENST00000309415 ZFHX4Q86UP3 3567 aa9.04□□□□□ -0.96
SH3RF3-201ENST00000309415 KRTAP12-3P60328 96 aa9.01□□□□□ -0.97
SH3RF3-201ENST00000309415 MEGF8Q7Z7M0 2845 aa8.96□□□□□ -0.98
SH3RF3-201ENST00000309415 ALMS1Q8TCU4 4167 aa8.94□□□□□ -0.98
SH3RF3-201ENST00000309415 INE1O15225 51 aa8.9□□□□□ -0.99
SH3RF3-201ENST00000309415 LCE3AQ5TA76 89 aa8.86□□□□□ -0.99
SH3RF3-201ENST00000309415 HUWE1Q7Z6Z7 4374 aaKnown RBP8.83□□□□□ -1
SH3RF3-201ENST00000309415 KRTAP8-1Q8IUC2 63 aa8.83□□□□□ -1
SH3RF3-201ENST00000309415 LAMA5O15230 3695 aa8.81□□□□□ -1
SH3RF3-201ENST00000309415 COL7A1Q02388 2944 aa8.8□□□□□ -1
SH3RF3-201ENST00000309415 KRTAP23-1A1A580 65 aa8.76□□□□□ -1.01
SH3RF3-201ENST00000309415 CSMD1Q96PZ7 3565 aa8.75□□□□□ -1.01
SH3RF3-201ENST00000309415 LORP23490 312 aaPredicted RBP8.69□□□□□ -1.02
SH3RF3-201ENST00000309415 TRRAPQ9Y4A5 3859 aa8.65□□□□□ -1.02
SH3RF3-201ENST00000309415 SMG1Q96Q15 3661 aaKnown RBP8.65□□□□□ -1.03
SH3RF3-201ENST00000309415 DMDP11532 3685 aa8.6□□□□□ -1.03
SH3RF3-201ENST00000309415 CSMD2Q7Z408 3487 aa8.56□□□□□ -1.04
SH3RF3-201ENST00000309415 KRTAP10-5P60370 271 aa8.53□□□□□ -1.04
SH3RF3-201ENST00000309415 MT1HP80294 61 aa8.48□□□□□ -1.05
SH3RF3-201ENST00000309415 SVEP1Q4LDE5 3571 aa8.43□□□□□ -1.06
SH3RF3-201ENST00000309415 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms