RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 FBN3Q75N90 2809 aa8.84□□□□□ -0.99
RUNX3-201ENST00000308873 KRTAP13-1Q8IUC0 172 aa8.84□□□□□ -0.99
RUNX3-201ENST00000308873 Q5W150 140 aa8.83□□□□□ -1
RUNX3-201ENST00000308873 Q75L30 129 aa8.83□□□□□ -1
RUNX3-201ENST00000308873 LY6G6CO95867 125 aa8.81□□□□□ -1
RUNX3-201ENST00000308873 ATP11AUNQ6ZP68 121 aa8.81□□□□□ -1
RUNX3-201ENST00000308873 Q6ZRN7 208 aaPredicted RBP8.79□□□□□ -1
RUNX3-201ENST00000308873 KTN1-AS1Q86SY8 53 aa8.79□□□□□ -1
RUNX3-201ENST00000308873 IGKV2D-30A0A075B6S6 120 aa8.78□□□□□ -1
RUNX3-201ENST00000308873 IGKV2-30P06310 120 aa8.78□□□□□ -1
RUNX3-201ENST00000308873 CDC42SE1Q9NRR8 79 aa8.78□□□□□ -1
RUNX3-201ENST00000308873 Q6ZR54 194 aa8.77□□□□□ -1.01
RUNX3-201ENST00000308873 LINC01558Q9Y6Z2 57 aa8.76□□□□□ -1.01
RUNX3-201ENST00000308873 SPINK1P00995 79 aa8.75□□□□□ -1.01
RUNX3-201ENST00000308873 MEGF8Q7Z7M0 2845 aa8.75□□□□□ -1.01
RUNX3-201ENST00000308873 ACYP2P14621 99 aa8.74□□□□□ -1.01
RUNX3-201ENST00000308873 DNAH7Q8WXX0 4024 aa8.73□□□□□ -1.01
RUNX3-201ENST00000308873 LINC00313P59037 77 aa8.73□□□□□ -1.01
RUNX3-201ENST00000308873 RBM12B-AS1Q9P1G2 102 aa8.73□□□□□ -1.01
RUNX3-201ENST00000308873 LINC00483Q53H64 154 aa8.72□□□□□ -1.01
RUNX3-201ENST00000308873 C1orf134Q5TEV5 83 aa8.72□□□□□ -1.01
RUNX3-201ENST00000308873 IGLV7-43P04211 117 aa8.72□□□□□ -1.01
RUNX3-201ENST00000308873 PLECQ15149 4684 aaKnown RBP8.71□□□□□ -1.02
RUNX3-201ENST00000308873 A0A1B0GU69 56 aa8.7□□□□□ -1.02
RUNX3-201ENST00000308873 DNAH3Q8TD57 4116 aa8.69□□□□□ -1.02
RUNX3-201ENST00000308873 PRAC1Q96KF2 57 aa8.67□□□□□ -1.02
RUNX3-201ENST00000308873 ASB16-AS1Q495Z4 193 aa8.67□□□□□ -1.02
RUNX3-201ENST00000308873 PLAC8Q9NZF1 115 aa8.65□□□□□ -1.02
RUNX3-201ENST00000308873 FRAS1Q86XX4 4008 aa8.64□□□□□ -1.03
RUNX3-201ENST00000308873 A6NN06 94 aa8.64□□□□□ -1.03
RUNX3-201ENST00000308873 C7orf65Q6ZTY9 151 aa8.63□□□□□ -1.03
RUNX3-201ENST00000308873 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
RUNX3-201ENST00000308873 FAM229AH3BQW9 127 aa8.61□□□□□ -1.03
RUNX3-201ENST00000308873 KRTAP10-2P60368 255 aa8.58□□□□□ -1.04
RUNX3-201ENST00000308873 ADM2Q7Z4H4 148 aa8.58□□□□□ -1.04
RUNX3-201ENST00000308873 SSBP3-AS1Q7Z2R9 100 aa8.57□□□□□ -1.04
RUNX3-201ENST00000308873 C8orf87E5RJ46 101 aa8.57□□□□□ -1.04
RUNX3-201ENST00000308873 Q8N1X5 172 aa8.55□□□□□ -1.04
RUNX3-201ENST00000308873 STARD9Q9P2P6 4700 aa8.51□□□□□ -1.05
RUNX3-201ENST00000308873 DNAH8Q96JB1 4490 aa8.51□□□□□ -1.05
RUNX3-201ENST00000308873 MIR22HGQ0VDD5 57 aa8.51□□□□□ -1.05
RUNX3-201ENST00000308873 KMT2AQ03164 3969 aa8.51□□□□□ -1.05
RUNX3-201ENST00000308873 DMAC1Q96GE9 116 aa8.51□□□□□ -1.05
RUNX3-201ENST00000308873 PLA2G1BP04054 148 aaKnown RBP8.5□□□□□ -1.05
RUNX3-201ENST00000308873 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
RUNX3-201ENST00000308873 UQCR11O14957 56 aa8.48□□□□□ -1.05
RUNX3-201ENST00000308873 TYMSOSQ8TAI1 123 aa8.47□□□□□ -1.05
RUNX3-201ENST00000308873 KRTAP13-3Q3SY46 172 aa8.46□□□□□ -1.05
RUNX3-201ENST00000308873 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.06
RUNX3-201ENST00000308873 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
RUNX3-201ENST00000308873 DMBT1Q9UGM3 2413 aaPredicted RBP8.42□□□□□ -1.06
RUNX3-201ENST00000308873 C9orf92A6NGG3 77 aa8.42□□□□□ -1.06
RUNX3-201ENST00000308873 DNAH17Q9UFH2 4485 aa8.41□□□□□ -1.06
RUNX3-201ENST00000308873 SMR3BP02814 79 aaPredicted RBP8.4□□□□□ -1.07
RUNX3-201ENST00000308873 PRKDCP78527 4128 aaKnown RBP8.38□□□□□ -1.07
RUNX3-201ENST00000308873 DNAH11Q96DT5 4516 aa8.37□□□□□ -1.07
RUNX3-201ENST00000308873 HECTD4Q9Y4D8 3996 aa8.36□□□□□ -1.07
RUNX3-201ENST00000308873 DNAH2Q9P225 4427 aa8.34□□□□□ -1.07
RUNX3-201ENST00000308873 VPS13DQ5THJ4 4388 aa8.33□□□□□ -1.08
RUNX3-201ENST00000308873 DNAH6Q9C0G6 4158 aa8.33□□□□□ -1.08
RUNX3-201ENST00000308873 SPATA8Q6RVD6 105 aa8.31□□□□□ -1.08
RUNX3-201ENST00000308873 CSAG1Q6PB30 78 aa8.31□□□□□ -1.08
RUNX3-201ENST00000308873 DYNC2H1Q8NCM8 4307 aaKnown RBP8.3□□□□□ -1.08
RUNX3-201ENST00000308873 KRTAP16-1A8MUX0 517 aa8.29□□□□□ -1.08
RUNX3-201ENST00000308873 LINC00304Q8N9R0 145 aa8.27□□□□□ -1.09
RUNX3-201ENST00000308873 LRP1BQ9NZR2 4599 aa8.26□□□□□ -1.09
RUNX3-201ENST00000308873 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
RUNX3-201ENST00000308873 LINC01554Q52M75 96 aa8.26□□□□□ -1.09
RUNX3-201ENST00000308873 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
RUNX3-201ENST00000308873 ALMS1Q8TCU4 4167 aa8.18□□□□□ -1.1
RUNX3-201ENST00000308873 DNHD1Q96M86 4753 aa8.16□□□□□ -1.1
RUNX3-201ENST00000308873 A0A1B0GU33 70 aa8.12□□□□□ -1.11
RUNX3-201ENST00000308873 Q6ZSA8 131 aa8.12□□□□□ -1.11
RUNX3-201ENST00000308873 DNAH5Q8TE73 4624 aa8.11□□□□□ -1.11
RUNX3-201ENST00000308873 VPS13BQ7Z7G8 4022 aa8.07□□□□□ -1.12
RUNX3-201ENST00000308873 H0YAA0 97 aa8.06□□□□□ -1.12
RUNX3-201ENST00000308873 A0A0D9SG42 100 aa8.04□□□□□ -1.12
RUNX3-201ENST00000308873 K7ERS5 55 aa8.04□□□□□ -1.12
RUNX3-201ENST00000308873 HYDINQ4G0P3 5121 aa8□□□□□ -1.13
RUNX3-201ENST00000308873 FAT1Q14517 4588 aa7.98□□□□□ -1.13
RUNX3-201ENST00000308873 H1FX-AS1Q4G0G2 97 aa7.98□□□□□ -1.13
RUNX3-201ENST00000308873 H3BS24 57 aa7.96□□□□□ -1.14
RUNX3-201ENST00000308873 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
RUNX3-201ENST00000308873 FAT2Q9NYQ8 4349 aa7.94□□□□□ -1.14
RUNX3-201ENST00000308873 A8MUU9 505 aa7.92□□□□□ -1.14
RUNX3-201ENST00000308873 PKHD1P08F94 4074 aa7.91□□□□□ -1.14
RUNX3-201ENST00000308873 COX6B2Q6YFQ2 88 aa7.88□□□□□ -1.15
RUNX3-201ENST00000308873 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
RUNX3-201ENST00000308873 KRTAP25-1Q3LHN0 102 aa7.87□□□□□ -1.15
RUNX3-201ENST00000308873 PKD1P98161 4303 aa7.82□□□□□ -1.16
RUNX3-201ENST00000308873 RPS29P62273 56 aaKnown RBP7.79□□□□□ -1.16
RUNX3-201ENST00000308873 MYCBP2O75592 4640 aa7.77□□□□□ -1.17
RUNX3-201ENST00000308873 SPINT4Q6UDR6 99 aa7.77□□□□□ -1.17
RUNX3-201ENST00000308873 DYNC1H1Q14204 4646 aaKnown RBP7.75□□□□□ -1.17
RUNX3-201ENST00000308873 RPL37P61927 97 aaKnown RBP7.73□□□□□ -1.17
RUNX3-201ENST00000308873 ROMO1P60602 79 aa7.72□□□□□ -1.17
RUNX3-201ENST00000308873 C10orf95Q9H7T3 257 aa7.7□□□□□ -1.18
RUNX3-201ENST00000308873 S4R3F8 94 aa7.68□□□□□ -1.18
RUNX3-201ENST00000308873 SACSQ9NZJ4 4579 aa7.66□□□□□ -1.18
RUNX3-201ENST00000308873 KRTAP13-4Q3LI77 160 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms