RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 LYSTQ99698 3801 aa6.99□□□□□ -1.29
FOXP4-201ENST00000307972 ZNF861PO60384 105 aa6.99□□□□□ -1.29
FOXP4-201ENST00000307972 SPINK7P58062 85 aa6.99□□□□□ -1.29
FOXP4-201ENST00000307972 RTL8CO15255 209 aa6.99□□□□□ -1.29
FOXP4-201ENST00000307972 IGLV5-52A0A0A0MRZ9 124 aa6.99□□□□□ -1.29
FOXP4-201ENST00000307972 CMYA5Q8N3K9 4069 aa6.98□□□□□ -1.29
FOXP4-201ENST00000307972 A0A087WTM6 91 aa6.98□□□□□ -1.29
FOXP4-201ENST00000307972 Q6ZRN7 208 aaPredicted RBP6.98□□□□□ -1.29
FOXP4-201ENST00000307972 RETNLBQ9BQ08 111 aa6.97□□□□□ -1.29
FOXP4-201ENST00000307972 DNAH9Q9NYC9 4486 aa6.96□□□□□ -1.3
FOXP4-201ENST00000307972 ACYP2P14621 99 aa6.96□□□□□ -1.3
FOXP4-201ENST00000307972 Q5W150 140 aa6.95□□□□□ -1.3
FOXP4-201ENST00000307972 RBM12B-AS1Q9P1G2 102 aa6.94□□□□□ -1.3
FOXP4-201ENST00000307972 A6NN06 94 aa6.94□□□□□ -1.3
FOXP4-201ENST00000307972 DNAH3Q8TD57 4116 aa6.93□□□□□ -1.3
FOXP4-201ENST00000307972 C7orf65Q6ZTY9 151 aa6.92□□□□□ -1.3
FOXP4-201ENST00000307972 PLAC8Q9NZF1 115 aa6.92□□□□□ -1.3
FOXP4-201ENST00000307972 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
FOXP4-201ENST00000307972 LINC00313P59037 77 aa6.89□□□□□ -1.31
FOXP4-201ENST00000307972 IGLV7-43P04211 117 aa6.88□□□□□ -1.31
FOXP4-201ENST00000307972 C8orf87E5RJ46 101 aa6.88□□□□□ -1.31
FOXP4-201ENST00000307972 A0A1B0GU69 56 aa6.88□□□□□ -1.31
FOXP4-201ENST00000307972 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
FOXP4-201ENST00000307972 SSBP3-AS1Q7Z2R9 100 aa6.85□□□□□ -1.31
FOXP4-201ENST00000307972 C1orf134Q5TEV5 83 aa6.83□□□□□ -1.32
FOXP4-201ENST00000307972 IGKV2D-30A0A075B6S6 120 aa6.82□□□□□ -1.32
FOXP4-201ENST00000307972 IGKV2-30P06310 120 aa6.82□□□□□ -1.32
FOXP4-201ENST00000307972 TGP01266 2768 aa6.82□□□□□ -1.32
FOXP4-201ENST00000307972 DMAC1Q96GE9 116 aa6.82□□□□□ -1.32
FOXP4-201ENST00000307972 DNAH7Q8WXX0 4024 aa6.81□□□□□ -1.32
FOXP4-201ENST00000307972 KRTAP13-3Q3SY46 172 aa6.81□□□□□ -1.32
FOXP4-201ENST00000307972 KRTAP21-3Q3LHN1 58 aa6.81□□□□□ -1.32
FOXP4-201ENST00000307972 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
FOXP4-201ENST00000307972 H3BS24 57 aa6.8□□□□□ -1.32
FOXP4-201ENST00000307972 LY6G6CO95867 125 aa6.78□□□□□ -1.32
FOXP4-201ENST00000307972 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
FOXP4-201ENST00000307972 UQCR11O14957 56 aa6.75□□□□□ -1.33
FOXP4-201ENST00000307972 MIR22HGQ0VDD5 57 aa6.75□□□□□ -1.33
FOXP4-201ENST00000307972 MEGF8Q7Z7M0 2845 aa6.74□□□□□ -1.33
FOXP4-201ENST00000307972 SPINK1P00995 79 aa6.74□□□□□ -1.33
FOXP4-201ENST00000307972 FBN3Q75N90 2809 aa6.74□□□□□ -1.33
FOXP4-201ENST00000307972 FRAS1Q86XX4 4008 aa6.72□□□□□ -1.33
FOXP4-201ENST00000307972 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.33
FOXP4-201ENST00000307972 ADM2Q7Z4H4 148 aa6.7□□□□□ -1.34
FOXP4-201ENST00000307972 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
FOXP4-201ENST00000307972 SPATA8Q6RVD6 105 aa6.69□□□□□ -1.34
FOXP4-201ENST00000307972 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
FOXP4-201ENST00000307972 PRKDCP78527 4128 aaKnown RBP6.67□□□□□ -1.34
FOXP4-201ENST00000307972 STARD9Q9P2P6 4700 aa6.65□□□□□ -1.34
FOXP4-201ENST00000307972 DYNC2H1Q8NCM8 4307 aaKnown RBP6.64□□□□□ -1.35
FOXP4-201ENST00000307972 PLA2G1BP04054 148 aaKnown RBP6.64□□□□□ -1.35
FOXP4-201ENST00000307972 Q8N1X5 172 aa6.64□□□□□ -1.35
FOXP4-201ENST00000307972 HECTD4Q9Y4D8 3996 aa6.63□□□□□ -1.35
FOXP4-201ENST00000307972 KRTAP16-1A8MUX0 517 aa6.63□□□□□ -1.35
FOXP4-201ENST00000307972 TYMSOSQ8TAI1 123 aa6.63□□□□□ -1.35
FOXP4-201ENST00000307972 VPS13DQ5THJ4 4388 aa6.62□□□□□ -1.35
FOXP4-201ENST00000307972 DNAH17Q9UFH2 4485 aa6.6□□□□□ -1.35
FOXP4-201ENST00000307972 KMT2AQ03164 3969 aa6.59□□□□□ -1.35
FOXP4-201ENST00000307972 LINC01554Q52M75 96 aa6.59□□□□□ -1.35
FOXP4-201ENST00000307972 KRTAP10-1P60331 282 aa6.58□□□□□ -1.36
FOXP4-201ENST00000307972 ALMS1Q8TCU4 4167 aa6.57□□□□□ -1.36
FOXP4-201ENST00000307972 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
FOXP4-201ENST00000307972 DNAH2Q9P225 4427 aa6.54□□□□□ -1.36
FOXP4-201ENST00000307972 KRTAP1-4P0C5Y4 121 aa6.54□□□□□ -1.36
FOXP4-201ENST00000307972 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
FOXP4-201ENST00000307972 C9orf92A6NGG3 77 aa6.49□□□□□ -1.37
FOXP4-201ENST00000307972 DNAH11Q96DT5 4516 aa6.49□□□□□ -1.37
FOXP4-201ENST00000307972 Q6ZSA8 131 aa6.49□□□□□ -1.37
FOXP4-201ENST00000307972 DNAH6Q9C0G6 4158 aa6.47□□□□□ -1.37
FOXP4-201ENST00000307972 A0A1B0GU33 70 aa6.43□□□□□ -1.38
FOXP4-201ENST00000307972 LRP1BQ9NZR2 4599 aa6.42□□□□□ -1.38
FOXP4-201ENST00000307972 SMR3BP02814 79 aaPredicted RBP6.4□□□□□ -1.38
FOXP4-201ENST00000307972 DNAH5Q8TE73 4624 aa6.4□□□□□ -1.39
FOXP4-201ENST00000307972 H0YAA0 97 aa6.39□□□□□ -1.39
FOXP4-201ENST00000307972 K7ERS5 55 aa6.38□□□□□ -1.39
FOXP4-201ENST00000307972 FLG2Q5D862 2391 aaPredicted RBP6.37□□□□□ -1.39
FOXP4-201ENST00000307972 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
FOXP4-201ENST00000307972 A8MUU9 505 aa6.34□□□□□ -1.39
FOXP4-201ENST00000307972 RPS29P62273 56 aaKnown RBP6.34□□□□□ -1.4
FOXP4-201ENST00000307972 KMT2CQ8NEZ4 4911 aaKnown RBP6.33□□□□□ -1.4
FOXP4-201ENST00000307972 VPS13BQ7Z7G8 4022 aa6.31□□□□□ -1.4
FOXP4-201ENST00000307972 C20orf166-AS1Q96NR2 134 aa6.31□□□□□ -1.4
FOXP4-201ENST00000307972 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
FOXP4-201ENST00000307972 KRTAP25-1Q3LHN0 102 aa6.29□□□□□ -1.4
FOXP4-201ENST00000307972 KRTAP3-1Q9BYR8 98 aa6.29□□□□□ -1.4
FOXP4-201ENST00000307972 DMBT1Q9UGM3 2413 aaPredicted RBP6.27□□□□□ -1.41
FOXP4-201ENST00000307972 RYR3Q15413 4870 aa6.25□□□□□ -1.41
FOXP4-201ENST00000307972 COX6B2Q6YFQ2 88 aa6.25□□□□□ -1.41
FOXP4-201ENST00000307972 HYDINQ4G0P3 5121 aa6.23□□□□□ -1.41
FOXP4-201ENST00000307972 PKD1P98161 4303 aa6.21□□□□□ -1.42
FOXP4-201ENST00000307972 A0A0D9SG42 100 aa6.2□□□□□ -1.42
FOXP4-201ENST00000307972 SACSQ9NZJ4 4579 aa6.17□□□□□ -1.42
FOXP4-201ENST00000307972 ROMO1P60602 79 aa6.16□□□□□ -1.42
FOXP4-201ENST00000307972 FAT2Q9NYQ8 4349 aa6.15□□□□□ -1.42
FOXP4-201ENST00000307972 RPL37P61927 97 aaKnown RBP6.14□□□□□ -1.43
FOXP4-201ENST00000307972 RYR2Q92736 4967 aa6.14□□□□□ -1.43
FOXP4-201ENST00000307972 PKHD1P08F94 4074 aa6.1□□□□□ -1.43
FOXP4-201ENST00000307972 FAT1Q14517 4588 aa6.09□□□□□ -1.43
FOXP4-201ENST00000307972 SPINT4Q6UDR6 99 aa6.07□□□□□ -1.44
FOXP4-201ENST00000307972 S4R3F8 94 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms