RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 TACC2O95359 2948 aa10.29□□□□□ -0.76
CTNND2-201ENST00000304623 TPRXLQ17RH7 258 aa10.29□□□□□ -0.76
CTNND2-201ENST00000304623 NIPBLQ6KC79 2804 aaeCLIP10.27□□□□□ -0.77
CTNND2-201ENST00000304623 ASH1LQ9NR48 2969 aaKnown RBP10.26□□□□□ -0.77
CTNND2-201ENST00000304623 A0A1B0GVY2 172 aa10.25□□□□□ -0.77
CTNND2-201ENST00000304623 FLNCQ14315 2725 aa10.23□□□□□ -0.77
CTNND2-201ENST00000304623 DMXL2Q8TDJ6 3036 aa10.21□□□□□ -0.78
CTNND2-201ENST00000304623 ATMQ13315 3056 aa10.15□□□□□ -0.78
CTNND2-201ENST00000304623 TENM4Q6N022 2769 aa10.14□□□□□ -0.79
CTNND2-201ENST00000304623 KRTAP13-3Q3SY46 172 aa10.13□□□□□ -0.79
CTNND2-201ENST00000304623 LRBAP50851 2863 aa10.12□□□□□ -0.79
CTNND2-201ENST00000304623 XIRP2A4UGR9 3374 aa10.11□□□□□ -0.79
CTNND2-201ENST00000304623 UNC80Q8N2C7 3258 aa10.08□□□□□ -0.8
CTNND2-201ENST00000304623 NBEAQ8NFP9 2946 aa10.08□□□□□ -0.8
CTNND2-201ENST00000304623 PRO2289Q9P1D8 64 aa10.08□□□□□ -0.8
CTNND2-201ENST00000304623 KRTAP10-10P60014 251 aa10.08□□□□□ -0.8
CTNND2-201ENST00000304623 BRCA2P51587 3418 aa10.08□□□□□ -0.8
CTNND2-201ENST00000304623 COL12A1Q99715 3063 aa10.06□□□□□ -0.8
CTNND2-201ENST00000304623 CELSR2Q9HCU4 2923 aa10.05□□□□□ -0.8
CTNND2-201ENST00000304623 ADGRG4Q8IZF6 3080 aa10.01□□□□□ -0.81
CTNND2-201ENST00000304623 CELSR3Q9NYQ7 3312 aa10□□□□□ -0.81
CTNND2-201ENST00000304623 LAMA1P25391 3075 aa9.97□□□□□ -0.81
CTNND2-201ENST00000304623 REV3LO60673 3130 aa9.94□□□□□ -0.82
CTNND2-201ENST00000304623 DCHS2Q6V1P9 2916 aa9.92□□□□□ -0.82
CTNND2-201ENST00000304623 FRYLO94915 3013 aa9.91□□□□□ -0.82
CTNND2-201ENST00000304623 CRYBG3Q68DQ2 2970 aa9.89□□□□□ -0.83
CTNND2-201ENST00000304623 KRTAP12-2P59991 146 aa9.88□□□□□ -0.83
CTNND2-201ENST00000304623 ZZEF1O43149 2961 aa9.84□□□□□ -0.83
CTNND2-201ENST00000304623 TENM3Q9P273 2699 aa9.82□□□□□ -0.84
CTNND2-201ENST00000304623 TGP01266 2768 aa9.8□□□□□ -0.84
CTNND2-201ENST00000304623 KRTAP13-4Q3LI77 160 aa9.8□□□□□ -0.84
CTNND2-201ENST00000304623 BOD1L1Q8NFC6 3051 aa9.79□□□□□ -0.84
CTNND2-201ENST00000304623 ZANQ9Y493 2812 aa9.74□□□□□ -0.85
CTNND2-201ENST00000304623 CDH23Q9H251 3354 aa9.74□□□□□ -0.85
CTNND2-201ENST00000304623 KRTAP12-1P59990 96 aa9.73□□□□□ -0.85
CTNND2-201ENST00000304623 TENM1Q9UKZ4 2725 aa9.72□□□□□ -0.85
CTNND2-201ENST00000304623 VCANP13611 3396 aa9.68□□□□□ -0.86
CTNND2-201ENST00000304623 COL6A3P12111 3177 aa9.66□□□□□ -0.86
CTNND2-201ENST00000304623 EYSQ5T1H1 3165 aa9.65□□□□□ -0.86
CTNND2-201ENST00000304623 CFAP47Q6ZTR5 3102 aa9.64□□□□□ -0.87
CTNND2-201ENST00000304623 NF1P21359 2839 aa9.61□□□□□ -0.87
CTNND2-201ENST00000304623 HRNRQ86YZ3 2850 aaPredicted RBP9.6□□□□□ -0.87
CTNND2-201ENST00000304623 KRTAP3-1Q9BYR8 98 aa9.59□□□□□ -0.87
CTNND2-201ENST00000304623 TENM2Q9NT68 2774 aa9.56□□□□□ -0.88
CTNND2-201ENST00000304623 TNRC18O15417 2968 aaPredicted RBP9.56□□□□□ -0.88
CTNND2-201ENST00000304623 FBN2P35556 2912 aa9.53□□□□□ -0.88
CTNND2-201ENST00000304623 DNAH14Q0VDD8 3507 aa9.53□□□□□ -0.88
CTNND2-201ENST00000304623 SZT2Q5T011 3432 aa9.5□□□□□ -0.89
CTNND2-201ENST00000304623 CELSR1Q9NYQ6 3014 aa9.4□□□□□ -0.9
CTNND2-201ENST00000304623 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
CTNND2-201ENST00000304623 KRTAP15-1Q3LI76 137 aa9.35□□□□□ -0.91
CTNND2-201ENST00000304623 PDZD2O15018 2839 aa9.33□□□□□ -0.92
CTNND2-201ENST00000304623 USP34Q70CQ2 3546 aa9.23□□□□□ -0.93
CTNND2-201ENST00000304623 SPEGQ15772 3267 aa9.22□□□□□ -0.93
CTNND2-201ENST00000304623 MXRA5Q9NR99 2828 aa9.21□□□□□ -0.93
CTNND2-201ENST00000304623 DMXL1Q9Y485 3027 aa9.17□□□□□ -0.94
CTNND2-201ENST00000304623 PKD1L1Q8TDX9 2849 aa9.17□□□□□ -0.94
CTNND2-201ENST00000304623 INE1O15225 51 aa9.13□□□□□ -0.95
CTNND2-201ENST00000304623 VWFP04275 2813 aa9.07□□□□□ -0.96
CTNND2-201ENST00000304623 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.96
CTNND2-201ENST00000304623 LOC400499M0QZD8 3231 aa8.97□□□□□ -0.97
CTNND2-201ENST00000304623 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
CTNND2-201ENST00000304623 SPTBN5Q9NRC6 3674 aaKnown RBP8.93□□□□□ -0.98
CTNND2-201ENST00000304623 KRTAP10-12P60413 245 aa8.86□□□□□ -0.99
CTNND2-201ENST00000304623 MT1HL1P0DM35 61 aa8.86□□□□□ -0.99
CTNND2-201ENST00000304623 MYO15AQ9UKN7 3530 aa8.81□□□□□ -1
CTNND2-201ENST00000304623 FBN3Q75N90 2809 aa8.78□□□□□ -1
CTNND2-201ENST00000304623 KRTAP23-1A1A580 65 aa8.75□□□□□ -1.01
CTNND2-201ENST00000304623 MEGF8Q7Z7M0 2845 aa8.74□□□□□ -1.01
CTNND2-201ENST00000304623 WDFY3Q8IZQ1 3526 aa8.74□□□□□ -1.01
CTNND2-201ENST00000304623 SRRM2Q9UQ35 2752 aaKnown RBP8.67□□□□□ -1.02
CTNND2-201ENST00000304623 KRTAP12-3P60328 96 aa8.67□□□□□ -1.02
CTNND2-201ENST00000304623 DCHS1Q96JQ0 3298 aa8.66□□□□□ -1.02
CTNND2-201ENST00000304623 FBN1P35555 2871 aaKnown RBP8.62□□□□□ -1.03
CTNND2-201ENST00000304623 RELNP78509 3460 aa8.59□□□□□ -1.03
CTNND2-201ENST00000304623 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
CTNND2-201ENST00000304623 CRCT1Q9UGL9 99 aa8.59□□□□□ -1.03
CTNND2-201ENST00000304623 LCE3AQ5TA76 89 aa8.52□□□□□ -1.05
CTNND2-201ENST00000304623 ZFHX4Q86UP3 3567 aa8.51□□□□□ -1.05
CTNND2-201ENST00000304623 OTOGQ6ZRI0 2925 aa8.49□□□□□ -1.05
CTNND2-201ENST00000304623 COL7A1Q02388 2944 aa8.48□□□□□ -1.05
CTNND2-201ENST00000304623 ANK3Q12955 4377 aaKnown RBP8.46□□□□□ -1.06
CTNND2-201ENST00000304623 NBPF19A0A087WUL8 3843 aa8.38□□□□□ -1.07
CTNND2-201ENST00000304623 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
CTNND2-201ENST00000304623 KRTAP4-5Q9BYR2 181 aa8.32□□□□□ -1.08
CTNND2-201ENST00000304623 CSMD1Q96PZ7 3565 aa8.28□□□□□ -1.08
CTNND2-201ENST00000304623 ASPMQ8IZT6 3477 aa8.26□□□□□ -1.09
CTNND2-201ENST00000304623 ZFHX3Q15911 3703 aa8.15□□□□□ -1.11
CTNND2-201ENST00000304623 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
CTNND2-201ENST00000304623 HUWE1Q7Z6Z7 4374 aaKnown RBP8.12□□□□□ -1.11
CTNND2-201ENST00000304623 LAMA5O15230 3695 aa8.06□□□□□ -1.12
CTNND2-201ENST00000304623 TRRAPQ9Y4A5 3859 aa8.04□□□□□ -1.12
CTNND2-201ENST00000304623 KRTAP8-1Q8IUC2 63 aa8.04□□□□□ -1.12
CTNND2-201ENST00000304623 ALMS1Q8TCU4 4167 aa8□□□□□ -1.13
CTNND2-201ENST00000304623 SMG1Q96Q15 3661 aaKnown RBP7.99□□□□□ -1.13
CTNND2-201ENST00000304623 MUC3AQ02505 3323 aa7.99□□□□□ -1.13
CTNND2-201ENST00000304623 DMDP11532 3685 aa7.87□□□□□ -1.15
CTNND2-201ENST00000304623 SVEP1Q4LDE5 3571 aa7.82□□□□□ -1.16
CTNND2-201ENST00000304623 CUBNO60494 3623 aa7.81□□□□□ -1.16
CTNND2-201ENST00000304623 CSMD2Q7Z408 3487 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms