RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 A6NN06 94 aa11.41□□□□□ -0.58
TRA2A-201ENST00000297071 NUPR2A6NF83 97 aa11.4□□□□□ -0.58
TRA2A-201ENST00000297071 ZNF861PO60384 105 aa11.39□□□□□ -0.59
TRA2A-201ENST00000297071 KRTAP13-3Q3SY46 172 aa11.39□□□□□ -0.59
TRA2A-201ENST00000297071 SPAG11AQ6PDA7 123 aa11.38□□□□□ -0.59
TRA2A-201ENST00000297071 SRRM2Q9UQ35 2752 aaKnown RBP11.37□□□□□ -0.59
TRA2A-201ENST00000297071 LYSTQ99698 3801 aa11.37□□□□□ -0.59
TRA2A-201ENST00000297071 BIRC6Q9NR09 4857 aa11.36□□□□□ -0.59
TRA2A-201ENST00000297071 PRKDCP78527 4128 aaKnown RBP11.36□□□□□ -0.59
TRA2A-201ENST00000297071 PSORS1C2Q9UIG4 136 aa11.36□□□□□ -0.59
TRA2A-201ENST00000297071 C8orf87E5RJ46 101 aa11.35□□□□□ -0.59
TRA2A-201ENST00000297071 SPTSSBQ8NFR3 76 aa11.35□□□□□ -0.59
TRA2A-201ENST00000297071 A0A087WTM6 91 aa11.34□□□□□ -0.59
TRA2A-201ENST00000297071 A0A087X002 238 aa11.31□□□□□ -0.6
TRA2A-201ENST00000297071 NOTCH2NLQ7Z3S9 236 aa11.31□□□□□ -0.6
TRA2A-201ENST00000297071 ACYP2P14621 99 aa11.3□□□□□ -0.6
TRA2A-201ENST00000297071 ALMS1Q8TCU4 4167 aa11.27□□□□□ -0.61
TRA2A-201ENST00000297071 RTL8CO15255 209 aa11.27□□□□□ -0.61
TRA2A-201ENST00000297071 SSBP3-AS1Q7Z2R9 100 aa11.26□□□□□ -0.61
TRA2A-201ENST00000297071 Q5W150 140 aa11.25□□□□□ -0.61
TRA2A-201ENST00000297071 SPINK7P58062 85 aa11.25□□□□□ -0.61
TRA2A-201ENST00000297071 C7orf65Q6ZTY9 151 aa11.24□□□□□ -0.61
TRA2A-201ENST00000297071 DMAC1Q96GE9 116 aa11.23□□□□□ -0.61
TRA2A-201ENST00000297071 VPS13DQ5THJ4 4388 aa11.23□□□□□ -0.61
TRA2A-201ENST00000297071 IGLV7-43P04211 117 aa11.21□□□□□ -0.62
TRA2A-201ENST00000297071 STAB2Q8WWQ8 2551 aa11.2□□□□□ -0.62
TRA2A-201ENST00000297071 DNAH8Q96JB1 4490 aa11.19□□□□□ -0.62
TRA2A-201ENST00000297071 DNAH17Q9UFH2 4485 aa11.19□□□□□ -0.62
TRA2A-201ENST00000297071 FAM229AH3BQW9 127 aa11.19□□□□□ -0.62
TRA2A-201ENST00000297071 ANAPC11Q9NYG5 84 aa11.19□□□□□ -0.62
TRA2A-201ENST00000297071 RBM12B-AS1Q9P1G2 102 aa11.19□□□□□ -0.62
TRA2A-201ENST00000297071 COL7A1Q02388 2944 aa11.18□□□□□ -0.62
TRA2A-201ENST00000297071 PLECQ15149 4684 aaKnown RBP11.18□□□□□ -0.62
TRA2A-201ENST00000297071 PRR26Q8N8Z3 221 aa11.17□□□□□ -0.62
TRA2A-201ENST00000297071 DNAH7Q8WXX0 4024 aa11.15□□□□□ -0.62
TRA2A-201ENST00000297071 EPPK1P58107 5090 aaKnown RBP11.14□□□□□ -0.63
TRA2A-201ENST00000297071 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
TRA2A-201ENST00000297071 IGKV2-30P06310 120 aa11.11□□□□□ -0.63
TRA2A-201ENST00000297071 LINC00313P59037 77 aa11.11□□□□□ -0.63
TRA2A-201ENST00000297071 CIRBP-AS1Q8TBR5 109 aa11.1□□□□□ -0.63
TRA2A-201ENST00000297071 HECTD4Q9Y4D8 3996 aa11.1□□□□□ -0.63
TRA2A-201ENST00000297071 CSMD3Q7Z407 3707 aa11.07□□□□□ -0.64
TRA2A-201ENST00000297071 SPATA8Q6RVD6 105 aa11.03□□□□□ -0.64
TRA2A-201ENST00000297071 A0A1B0GU69 56 aa11.01□□□□□ -0.65
TRA2A-201ENST00000297071 KRTAP16-1A8MUX0 517 aa11□□□□□ -0.65
TRA2A-201ENST00000297071 C1orf134Q5TEV5 83 aa10.98□□□□□ -0.65
TRA2A-201ENST00000297071 PLA2G1BP04054 148 aaKnown RBP10.95□□□□□ -0.66
TRA2A-201ENST00000297071 DNAH2Q9P225 4427 aa10.94□□□□□ -0.66
TRA2A-201ENST00000297071 UQCR11O14957 56 aa10.91□□□□□ -0.66
TRA2A-201ENST00000297071 KRTAP13-2Q52LG2 175 aa10.91□□□□□ -0.66
TRA2A-201ENST00000297071 FRAS1Q86XX4 4008 aa10.9□□□□□ -0.66
TRA2A-201ENST00000297071 STARD9Q9P2P6 4700 aa10.9□□□□□ -0.67
TRA2A-201ENST00000297071 DNAH6Q9C0G6 4158 aa10.88□□□□□ -0.67
TRA2A-201ENST00000297071 RYR2Q92736 4967 aa10.87□□□□□ -0.67
TRA2A-201ENST00000297071 IGKV2D-30A0A075B6S6 120 aa10.87□□□□□ -0.67
TRA2A-201ENST00000297071 HYDINQ4G0P3 5121 aa10.87□□□□□ -0.67
TRA2A-201ENST00000297071 MIR22HGQ0VDD5 57 aa10.86□□□□□ -0.67
TRA2A-201ENST00000297071 Q6ZSA8 131 aa10.83□□□□□ -0.68
TRA2A-201ENST00000297071 PCLOQ9Y6V0 5065 aa10.8□□□□□ -0.68
TRA2A-201ENST00000297071 RETNLBQ9BQ08 111 aa10.79□□□□□ -0.68
TRA2A-201ENST00000297071 KRTAP1-4P0C5Y4 121 aa10.77□□□□□ -0.69
TRA2A-201ENST00000297071 DNAH11Q96DT5 4516 aa10.74□□□□□ -0.69
TRA2A-201ENST00000297071 HERC2O95714 4834 aa10.73□□□□□ -0.69
TRA2A-201ENST00000297071 SPINK1P00995 79 aa10.72□□□□□ -0.69
TRA2A-201ENST00000297071 KRTAP10-2P60368 255 aa10.72□□□□□ -0.69
TRA2A-201ENST00000297071 KMT2AQ03164 3969 aa10.71□□□□□ -0.7
TRA2A-201ENST00000297071 RPS29P62273 56 aaKnown RBP10.7□□□□□ -0.7
TRA2A-201ENST00000297071 C4orf48Q5BLP8 95 aa10.69□□□□□ -0.7
TRA2A-201ENST00000297071 DNAH5Q8TE73 4624 aa10.68□□□□□ -0.7
TRA2A-201ENST00000297071 PRAC1Q96KF2 57 aa10.68□□□□□ -0.7
TRA2A-201ENST00000297071 RYR1P21817 5038 aa10.67□□□□□ -0.7
TRA2A-201ENST00000297071 SACSQ9NZJ4 4579 aa10.66□□□□□ -0.7
TRA2A-201ENST00000297071 LY6G6CO95867 125 aa10.65□□□□□ -0.71
TRA2A-201ENST00000297071 KRTAP10-1P60331 282 aa10.63□□□□□ -0.71
TRA2A-201ENST00000297071 LINC01554Q52M75 96 aa10.63□□□□□ -0.71
TRA2A-201ENST00000297071 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
TRA2A-201ENST00000297071 TYMSOSQ8TAI1 123 aa10.61□□□□□ -0.71
TRA2A-201ENST00000297071 PKD1P98161 4303 aa10.51□□□□□ -0.73
TRA2A-201ENST00000297071 LRP1BQ9NZR2 4599 aa10.49□□□□□ -0.73
TRA2A-201ENST00000297071 Q8N1X5 172 aa10.48□□□□□ -0.73
TRA2A-201ENST00000297071 LINC00304Q8N9R0 145 aa10.48□□□□□ -0.73
TRA2A-201ENST00000297071 A8MUU9 505 aa10.47□□□□□ -0.73
TRA2A-201ENST00000297071 C20orf166-AS1Q96NR2 134 aa10.47□□□□□ -0.73
TRA2A-201ENST00000297071 CSAG1Q6PB30 78 aa10.43□□□□□ -0.74
TRA2A-201ENST00000297071 H0YAA0 97 aa10.4□□□□□ -0.75
TRA2A-201ENST00000297071 VPS13BQ7Z7G8 4022 aa10.37□□□□□ -0.75
TRA2A-201ENST00000297071 FAT2Q9NYQ8 4349 aa10.36□□□□□ -0.75
TRA2A-201ENST00000297071 A0A1B0GU33 70 aa10.35□□□□□ -0.75
TRA2A-201ENST00000297071 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
TRA2A-201ENST00000297071 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
TRA2A-201ENST00000297071 KRTAP25-1Q3LHN0 102 aa10.23□□□□□ -0.77
TRA2A-201ENST00000297071 PKHD1L1Q86WI1 4243 aa10.21□□□□□ -0.77
TRA2A-201ENST00000297071 COX6B2Q6YFQ2 88 aa10.21□□□□□ -0.78
TRA2A-201ENST00000297071 KIAA1109Q2LD37 5005 aa10.2□□□□□ -0.78
TRA2A-201ENST00000297071 C9orf92A6NGG3 77 aa10.17□□□□□ -0.78
TRA2A-201ENST00000297071 K7ERS5 55 aa10.17□□□□□ -0.78
TRA2A-201ENST00000297071 ABCA13Q86UQ4 5058 aa10.14□□□□□ -0.79
TRA2A-201ENST00000297071 KRTAP10-4P60372 401 aaPredicted RBP10.1□□□□□ -0.79
TRA2A-201ENST00000297071 APOBP04114 4563 aaKnown RBP10.06□□□□□ -0.8
TRA2A-201ENST00000297071 UBR4Q5T4S7 5183 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms