RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 ADGRG4Q8IZF6 3080 aa5.93□□□□□ -1.46
PBRM1-201ENST00000296302 ATMQ13315 3056 aa5.93□□□□□ -1.46
PBRM1-201ENST00000296302 CELSR3Q9NYQ7 3312 aa5.92□□□□□ -1.46
PBRM1-201ENST00000296302 DMXL2Q8TDJ6 3036 aa5.92□□□□□ -1.46
PBRM1-201ENST00000296302 PP632Q6XCG6 107 aa5.92□□□□□ -1.46
PBRM1-201ENST00000296302 HIVEP1P15822 2718 aa5.9□□□□□ -1.46
PBRM1-201ENST00000296302 LRBAP50851 2863 aa5.9□□□□□ -1.47
PBRM1-201ENST00000296302 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
PBRM1-201ENST00000296302 KRTAP1-4P0C5Y4 121 aa5.88□□□□□ -1.47
PBRM1-201ENST00000296302 P0C880 135 aa5.86□□□□□ -1.47
PBRM1-201ENST00000296302 LAMA1P25391 3075 aa5.85□□□□□ -1.47
PBRM1-201ENST00000296302 COL12A1Q99715 3063 aa5.85□□□□□ -1.47
PBRM1-201ENST00000296302 CDH23Q9H251 3354 aa5.83□□□□□ -1.48
PBRM1-201ENST00000296302 VCANP13611 3396 aa5.82□□□□□ -1.48
PBRM1-201ENST00000296302 CELSR2Q9HCU4 2923 aa5.81□□□□□ -1.48
PBRM1-201ENST00000296302 FRYLO94915 3013 aa5.8□□□□□ -1.48
PBRM1-201ENST00000296302 BOD1L1Q8NFC6 3051 aa5.79□□□□□ -1.48
PBRM1-201ENST00000296302 KRTAP13-3Q3SY46 172 aa5.78□□□□□ -1.48
PBRM1-201ENST00000296302 XP32Q5T750 250 aa5.77□□□□□ -1.49
PBRM1-201ENST00000296302 ZZEF1O43149 2961 aa5.77□□□□□ -1.49
PBRM1-201ENST00000296302 USP34Q70CQ2 3546 aa5.76□□□□□ -1.49
PBRM1-201ENST00000296302 DNAH14Q0VDD8 3507 aa5.75□□□□□ -1.49
PBRM1-201ENST00000296302 DCHS2Q6V1P9 2916 aa5.73□□□□□ -1.49
PBRM1-201ENST00000296302 ZANQ9Y493 2812 aa5.73□□□□□ -1.49
PBRM1-201ENST00000296302 COL6A3P12111 3177 aa5.7□□□□□ -1.5
PBRM1-201ENST00000296302 KRTAP10-8P60410 259 aa5.68□□□□□ -1.5
PBRM1-201ENST00000296302 SZT2Q5T011 3432 aa5.68□□□□□ -1.5
PBRM1-201ENST00000296302 TENM4Q6N022 2769 aa5.67□□□□□ -1.5
PBRM1-201ENST00000296302 HRNRQ86YZ3 2850 aaPredicted RBP5.67□□□□□ -1.5
PBRM1-201ENST00000296302 CFAP47Q6ZTR5 3102 aa5.63□□□□□ -1.51
PBRM1-201ENST00000296302 TNRC18O15417 2968 aaPredicted RBP5.63□□□□□ -1.51
PBRM1-201ENST00000296302 TPRXLQ17RH7 258 aa5.62□□□□□ -1.51
PBRM1-201ENST00000296302 TGP01266 2768 aa5.61□□□□□ -1.51
PBRM1-201ENST00000296302 REV3LO60673 3130 aa5.61□□□□□ -1.51
PBRM1-201ENST00000296302 FBN2P35556 2912 aa5.6□□□□□ -1.51
PBRM1-201ENST00000296302 EYSQ5T1H1 3165 aa5.59□□□□□ -1.51
PBRM1-201ENST00000296302 KRTAP21-3Q3LHN1 58 aa5.57□□□□□ -1.52
PBRM1-201ENST00000296302 NF1P21359 2839 aa5.56□□□□□ -1.52
PBRM1-201ENST00000296302 CRYBG3Q68DQ2 2970 aa5.55□□□□□ -1.52
PBRM1-201ENST00000296302 TENM3Q9P273 2699 aa5.54□□□□□ -1.52
PBRM1-201ENST00000296302 KRTAP12-2P59991 146 aa5.53□□□□□ -1.52
PBRM1-201ENST00000296302 A0A1B0GVY2 172 aa5.51□□□□□ -1.53
PBRM1-201ENST00000296302 DMXL1Q9Y485 3027 aa5.49□□□□□ -1.53
PBRM1-201ENST00000296302 TENM1Q9UKZ4 2725 aa5.47□□□□□ -1.53
PBRM1-201ENST00000296302 KRTAP12-1P59990 96 aa5.46□□□□□ -1.54
PBRM1-201ENST00000296302 KRTAP13-4Q3LI77 160 aa5.44□□□□□ -1.54
PBRM1-201ENST00000296302 MXRA5Q9NR99 2828 aa5.44□□□□□ -1.54
PBRM1-201ENST00000296302 CELSR1Q9NYQ6 3014 aa5.43□□□□□ -1.54
PBRM1-201ENST00000296302 KRTAP3-1Q9BYR8 98 aa5.43□□□□□ -1.54
PBRM1-201ENST00000296302 SPEGQ15772 3267 aa5.41□□□□□ -1.54
PBRM1-201ENST00000296302 KRTAP10-10P60014 251 aa5.4□□□□□ -1.55
PBRM1-201ENST00000296302 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
PBRM1-201ENST00000296302 LOC400499M0QZD8 3231 aa5.39□□□□□ -1.55
PBRM1-201ENST00000296302 SPTBN5Q9NRC6 3674 aaKnown RBP5.35□□□□□ -1.55
PBRM1-201ENST00000296302 TENM2Q9NT68 2774 aa5.34□□□□□ -1.55
PBRM1-201ENST00000296302 PDZD2O15018 2839 aa5.33□□□□□ -1.56
PBRM1-201ENST00000296302 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
PBRM1-201ENST00000296302 WDFY3Q8IZQ1 3526 aa5.31□□□□□ -1.56
PBRM1-201ENST00000296302 MYO15AQ9UKN7 3530 aa5.24□□□□□ -1.57
PBRM1-201ENST00000296302 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
PBRM1-201ENST00000296302 SPENQ96T58 3664 aaKnown RBP5.21□□□□□ -1.58
PBRM1-201ENST00000296302 PKD1L1Q8TDX9 2849 aa5.2□□□□□ -1.58
PBRM1-201ENST00000296302 VWFP04275 2813 aa5.14□□□□□ -1.59
PBRM1-201ENST00000296302 DCHS1Q96JQ0 3298 aa5.13□□□□□ -1.59
PBRM1-201ENST00000296302 KRTAP3-2Q9BYR7 98 aa5.13□□□□□ -1.59
PBRM1-201ENST00000296302 RELNP78509 3460 aa5.11□□□□□ -1.59
PBRM1-201ENST00000296302 DMDP11532 3685 aa5.1□□□□□ -1.59
PBRM1-201ENST00000296302 INE1O15225 51 aa5.1□□□□□ -1.59
PBRM1-201ENST00000296302 KRTAP3-3Q9BYR6 98 aa5.09□□□□□ -1.6
PBRM1-201ENST00000296302 FBN3Q75N90 2809 aa5.07□□□□□ -1.6
PBRM1-201ENST00000296302 MEGF8Q7Z7M0 2845 aa5.03□□□□□ -1.6
PBRM1-201ENST00000296302 FBN1P35555 2871 aaKnown RBP5.03□□□□□ -1.6
PBRM1-201ENST00000296302 CSMD1Q96PZ7 3565 aa5□□□□□ -1.61
PBRM1-201ENST00000296302 ZFHX4Q86UP3 3567 aa4.99□□□□□ -1.61
PBRM1-201ENST00000296302 SRRM2Q9UQ35 2752 aaKnown RBP4.98□□□□□ -1.61
PBRM1-201ENST00000296302 MUC3AQ02505 3323 aa4.94□□□□□ -1.62
PBRM1-201ENST00000296302 OTOGQ6ZRI0 2925 aa4.93□□□□□ -1.62
PBRM1-201ENST00000296302 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
PBRM1-201ENST00000296302 ASPMQ8IZT6 3477 aa4.91□□□□□ -1.62
PBRM1-201ENST00000296302 MT1HL1P0DM35 61 aa4.91□□□□□ -1.62
PBRM1-201ENST00000296302 ZFHX3Q15911 3703 aa4.9□□□□□ -1.63
PBRM1-201ENST00000296302 ANK3Q12955 4377 aaKnown RBP4.9□□□□□ -1.63
PBRM1-201ENST00000296302 SMG1Q96Q15 3661 aaKnown RBP4.87□□□□□ -1.63
PBRM1-201ENST00000296302 COL7A1Q02388 2944 aa4.86□□□□□ -1.63
PBRM1-201ENST00000296302 LAMA5O15230 3695 aa4.86□□□□□ -1.63
PBRM1-201ENST00000296302 KRTAP10-4P60372 401 aaPredicted RBP4.84□□□□□ -1.63
PBRM1-201ENST00000296302 KRTAP10-12P60413 245 aa4.84□□□□□ -1.63
PBRM1-201ENST00000296302 NBPF19A0A087WUL8 3843 aa4.81□□□□□ -1.64
PBRM1-201ENST00000296302 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
PBRM1-201ENST00000296302 BSNQ9UPA5 3926 aa4.76□□□□□ -1.65
PBRM1-201ENST00000296302 SVEP1Q4LDE5 3571 aa4.75□□□□□ -1.65
PBRM1-201ENST00000296302 LCE3AQ5TA76 89 aa4.71□□□□□ -1.65
PBRM1-201ENST00000296302 TRRAPQ9Y4A5 3859 aa4.71□□□□□ -1.66
PBRM1-201ENST00000296302 LORP23490 312 aaPredicted RBP4.68□□□□□ -1.66
PBRM1-201ENST00000296302 HUWE1Q7Z6Z7 4374 aaKnown RBP4.68□□□□□ -1.66
PBRM1-201ENST00000296302 CUBNO60494 3623 aa4.67□□□□□ -1.66
PBRM1-201ENST00000296302 CSMD2Q7Z408 3487 aa4.61□□□□□ -1.67
PBRM1-201ENST00000296302 VPS13CQ709C8 3753 aa4.57□□□□□ -1.68
PBRM1-201ENST00000296302 CRCT1Q9UGL9 99 aa4.56□□□□□ -1.68
PBRM1-201ENST00000296302 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms