RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 DCAF8L2P0C7V8 631 aa18.31■□□□□ 0.52
PBRM1-201ENST00000296302 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
PBRM1-201ENST00000296302 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
PBRM1-201ENST00000296302 PELP1Q8IZL8 1130 aaKnown RBP17.64■□□□□ 0.41
PBRM1-201ENST00000296302 SHROOM4Q9ULL8 1493 aa17.45■□□□□ 0.38
PBRM1-201ENST00000296302 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.34
PBRM1-201ENST00000296302 EHMT2Q96KQ7 1210 aa17.16■□□□□ 0.34
PBRM1-201ENST00000296302 ZEB1P37275 1124 aaPredicted RBP17.12■□□□□ 0.33
PBRM1-201ENST00000296302 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
PBRM1-201ENST00000296302 MYT1Q01538 1121 aa17.08■□□□□ 0.32
PBRM1-201ENST00000296302 APLP2Q06481 763 aa17.04■□□□□ 0.32
PBRM1-201ENST00000296302 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
PBRM1-201ENST00000296302 ERICH6Q7L0X2 663 aa16.82■□□□□ 0.28
PBRM1-201ENST00000296302 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
PBRM1-201ENST00000296302 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
PBRM1-201ENST00000296302 HRCP23327 699 aa16.64■□□□□ 0.25
PBRM1-201ENST00000296302 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
PBRM1-201ENST00000296302 NEFLP07196 543 aa16.55■□□□□ 0.24
PBRM1-201ENST00000296302 TRIM26Q12899 539 aaPredicted RBP16.53■□□□□ 0.24
PBRM1-201ENST00000296302 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
PBRM1-201ENST00000296302 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
PBRM1-201ENST00000296302 RANGAP1P46060 587 aaPredicted RBP16.32■□□□□ 0.2
PBRM1-201ENST00000296302 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
PBRM1-201ENST00000296302 CHIC1Q5VXU3 224 aa16.16■□□□□ 0.18
PBRM1-201ENST00000296302 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
PBRM1-201ENST00000296302 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.16
PBRM1-201ENST00000296302 DIEXFQ68CQ4 756 aaKnown RBP16.01■□□□□ 0.15
PBRM1-201ENST00000296302 DAXXQ9UER7 740 aaPredicted RBP15.99■□□□□ 0.15
PBRM1-201ENST00000296302 HNRNPUL2Q1KMD3 747 aaKnown RBP15.89■□□□□ 0.14
PBRM1-201ENST00000296302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
PBRM1-201ENST00000296302 GTF3C3Q9Y5Q9 886 aa15.84■□□□□ 0.13
PBRM1-201ENST00000296302 RTL5Q5HYW3 569 aaPredicted RBP15.84■□□□□ 0.13
PBRM1-201ENST00000296302 ITGAEP38570 1179 aa15.82■□□□□ 0.12
PBRM1-201ENST00000296302 POLR3GLQ9BT43 218 aa15.71■□□□□ 0.1
PBRM1-201ENST00000296302 ACIN1Q9UKV3 1341 aaKnown RBP15.7■□□□□ 0.1
PBRM1-201ENST00000296302 ZNF316A6NFI3 1004 aaPredicted RBP15.64■□□□□ 0.09
PBRM1-201ENST00000296302 CDK11AQ9UQ88 783 aaPredicted RBP15.58■□□□□ 0.08
PBRM1-201ENST00000296302 BCANQ96GW7 911 aa15.57■□□□□ 0.08
PBRM1-201ENST00000296302 CNGB1Q14028 1251 aaPredicted RBP15.53■□□□□ 0.08
PBRM1-201ENST00000296302 CLSPNQ9HAW4 1339 aa15.52■□□□□ 0.08
PBRM1-201ENST00000296302 ANP32CO43423 234 aa15.51■□□□□ 0.07
PBRM1-201ENST00000296302 FAM50AQ14320 339 aaKnown RBP15.44■□□□□ 0.06
PBRM1-201ENST00000296302 NEUROD1Q13562 356 aa15.41■□□□□ 0.06
PBRM1-201ENST00000296302 DCAF1Q9Y4B6 1507 aa15.37■□□□□ 0.05
PBRM1-201ENST00000296302 TRIM52Q96A61 297 aa15.33■□□□□ 0.05
PBRM1-201ENST00000296302 MYT1LQ9UL68 1186 aa15.33■□□□□ 0.05
PBRM1-201ENST00000296302 ANP32AP39687 249 aaKnown RBP15.32■□□□□ 0.04
PBRM1-201ENST00000296302 SLC4A1APQ9BWU0 796 aaKnown RBP15.25■□□□□ 0.03
PBRM1-201ENST00000296302 SCAF1Q9H7N4 1312 aaKnown RBP15.24■□□□□ 0.03
PBRM1-201ENST00000296302 FKBP8Q14318 412 aa15.22■□□□□ 0.03
PBRM1-201ENST00000296302 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
PBRM1-201ENST00000296302 ZNF326Q5BKZ1 582 aaKnown RBP15.14■□□□□ 0.01
PBRM1-201ENST00000296302 ZBTB47Q9UFB7 747 aaPredicted RBP15.12■□□□□ 0.01
PBRM1-201ENST00000296302 NPM2Q86SE8 214 aaKnown RBP15.09■□□□□ 0.01
PBRM1-201ENST00000296302 EIF5BO60841 1220 aaKnown RBP15.09■□□□□ 0.01
PBRM1-201ENST00000296302 CANXP27824 592 aaKnown RBP15.09■□□□□ 0.01
PBRM1-201ENST00000296302 HNRNPUQ00839 825 aaKnown RBP eCLIP15.05■□□□□ 0
PBRM1-201ENST00000296302 GLIPR1L2Q4G1C9 344 aa15.03■□□□□ -0
PBRM1-201ENST00000296302 DDX10Q13206 875 aaKnown RBP15.01□□□□□ -0.01
PBRM1-201ENST00000296302 TONSLQ96HA7 1378 aa15.01□□□□□ -0.01
PBRM1-201ENST00000296302 MIER1Q8N108 512 aa14.99□□□□□ -0.01
PBRM1-201ENST00000296302 ANP32BQ92688 251 aaKnown RBP14.98□□□□□ -0.01
PBRM1-201ENST00000296302 CCDC136Q96JN2 1154 aa14.94□□□□□ -0.02
PBRM1-201ENST00000296302 NBR1Q14596 966 aa14.93□□□□□ -0.02
PBRM1-201ENST00000296302 UPF2Q9HAU5 1272 aaKnown RBP14.93□□□□□ -0.02
PBRM1-201ENST00000296302 ANP32EQ9BTT0 268 aa14.92□□□□□ -0.02
PBRM1-201ENST00000296302 FAM9BQ8IZU0 186 aa14.92□□□□□ -0.02
PBRM1-201ENST00000296302 NEFMP07197 916 aa14.91□□□□□ -0.02
PBRM1-201ENST00000296302 PABPN1Q86U42 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
PBRM1-201ENST00000296302 P3H3Q8IVL6 736 aa14.87□□□□□ -0.03
PBRM1-201ENST00000296302 ABCC9O60706 1549 aa14.85□□□□□ -0.03
PBRM1-201ENST00000296302 HSP90AA1P07900 732 aaKnown RBP14.85□□□□□ -0.03
PBRM1-201ENST00000296302 CCDC180Q9P1Z9 1646 aa14.83□□□□□ -0.04
PBRM1-201ENST00000296302 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
PBRM1-201ENST00000296302 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.81□□□□□ -0.04
PBRM1-201ENST00000296302 TMC1Q8TDI8 760 aa14.81□□□□□ -0.04
PBRM1-201ENST00000296302 MRS2Q9HD23 443 aa14.81□□□□□ -0.04
PBRM1-201ENST00000296302 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
PBRM1-201ENST00000296302 MYO15BQ96JP2 1530 aa14.8□□□□□ -0.04
PBRM1-201ENST00000296302 DDRGK1Q96HY6 314 aa14.75□□□□□ -0.05
PBRM1-201ENST00000296302 IRX6P78412 446 aaPredicted RBP14.75□□□□□ -0.05
PBRM1-201ENST00000296302 ZNF777Q9ULD5 760 aaPredicted RBP14.72□□□□□ -0.05
PBRM1-201ENST00000296302 SALL2Q9Y467 1007 aaPredicted RBP14.71□□□□□ -0.05
PBRM1-201ENST00000296302 ARID3CA6NKF2 412 aa14.69□□□□□ -0.06
PBRM1-201ENST00000296302 CLIP1P30622 1438 aa14.69□□□□□ -0.06
PBRM1-201ENST00000296302 EIF4G2P78344 907 aaKnown RBP eCLIP14.68□□□□□ -0.06
PBRM1-201ENST00000296302 SLC24A1O60721 1099 aa14.67□□□□□ -0.06
PBRM1-201ENST00000296302 WDR43Q15061 677 aaKnown RBP eCLIP14.66□□□□□ -0.06
PBRM1-201ENST00000296302 PPM1GO15355 546 aaPredicted RBP14.65□□□□□ -0.06
PBRM1-201ENST00000296302 BECN1Q14457 450 aa14.65□□□□□ -0.06
PBRM1-201ENST00000296302 EEA1Q15075 1411 aa14.65□□□□□ -0.06
PBRM1-201ENST00000296302 SUPT16HQ9Y5B9 1047 aaKnown RBP14.65□□□□□ -0.06
PBRM1-201ENST00000296302 FBLN2P98095 1184 aa14.65□□□□□ -0.06
PBRM1-201ENST00000296302 ARXQ96QS3 562 aa14.64□□□□□ -0.07
PBRM1-201ENST00000296302 CEP162Q5TB80 1403 aa14.63□□□□□ -0.07
PBRM1-201ENST00000296302 HIRIP3Q9BW71 556 aaPredicted RBP14.62□□□□□ -0.07
PBRM1-201ENST00000296302 PPP4R2Q9NY27 417 aa14.61□□□□□ -0.07
PBRM1-201ENST00000296302 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
PBRM1-201ENST00000296302 CHIC2Q9UKJ5 165 aa14.6□□□□□ -0.07
PBRM1-201ENST00000296302 ERICH6BQ5W0A0 696 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms