RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 KRTAP1-1Q07627 177 aa6.33□□□□□ -1.4
FYCO1-201ENST00000296137 Q5VSD8 79 aa6.33□□□□□ -1.4
FYCO1-201ENST00000296137 PP632Q6XCG6 107 aa6.32□□□□□ -1.4
FYCO1-201ENST00000296137 HTTP42858 3142 aa6.3□□□□□ -1.4
FYCO1-201ENST00000296137 COL6A3P12111 3177 aa6.29□□□□□ -1.4
FYCO1-201ENST00000296137 DMXL2Q8TDJ6 3036 aa6.28□□□□□ -1.4
FYCO1-201ENST00000296137 P0C880 135 aa6.27□□□□□ -1.41
FYCO1-201ENST00000296137 HIVEP1P15822 2718 aa6.25□□□□□ -1.41
FYCO1-201ENST00000296137 WDFY3Q8IZQ1 3526 aa6.25□□□□□ -1.41
FYCO1-201ENST00000296137 ZZEF1O43149 2961 aa6.25□□□□□ -1.41
FYCO1-201ENST00000296137 TNP1P09430 55 aa6.25□□□□□ -1.41
FYCO1-201ENST00000296137 NF1P21359 2839 aa6.24□□□□□ -1.41
FYCO1-201ENST00000296137 TENM1Q9UKZ4 2725 aa6.24□□□□□ -1.41
FYCO1-201ENST00000296137 USP34Q70CQ2 3546 aa6.24□□□□□ -1.41
FYCO1-201ENST00000296137 VCANP13611 3396 aa6.23□□□□□ -1.41
FYCO1-201ENST00000296137 ATMQ13315 3056 aa6.22□□□□□ -1.41
FYCO1-201ENST00000296137 H0YAA0 97 aa6.21□□□□□ -1.42
FYCO1-201ENST00000296137 CELSR2Q9HCU4 2923 aa6.2□□□□□ -1.42
FYCO1-201ENST00000296137 TGP01266 2768 aa6.19□□□□□ -1.42
FYCO1-201ENST00000296137 ADGRG4Q8IZF6 3080 aa6.18□□□□□ -1.42
FYCO1-201ENST00000296137 TNRC18O15417 2968 aaPredicted RBP6.18□□□□□ -1.42
FYCO1-201ENST00000296137 PDZD2O15018 2839 aa6.15□□□□□ -1.42
FYCO1-201ENST00000296137 CFAP47Q6ZTR5 3102 aa6.13□□□□□ -1.43
FYCO1-201ENST00000296137 RPS29P62273 56 aaKnown RBP6.13□□□□□ -1.43
FYCO1-201ENST00000296137 TENM3Q9P273 2699 aa6.11□□□□□ -1.43
FYCO1-201ENST00000296137 NIPBLQ6KC79 2804 aaeCLIP6.11□□□□□ -1.43
FYCO1-201ENST00000296137 ASPMQ8IZT6 3477 aa6.09□□□□□ -1.43
FYCO1-201ENST00000296137 DCHS2Q6V1P9 2916 aa6.09□□□□□ -1.43
FYCO1-201ENST00000296137 SZT2Q5T011 3432 aa6.09□□□□□ -1.43
FYCO1-201ENST00000296137 SPEGQ15772 3267 aa6.09□□□□□ -1.43
FYCO1-201ENST00000296137 KRTAP1-5Q9BYS1 174 aa6.08□□□□□ -1.44
FYCO1-201ENST00000296137 KRTAP10-1P60331 282 aa6.07□□□□□ -1.44
FYCO1-201ENST00000296137 CELSR1Q9NYQ6 3014 aa6.04□□□□□ -1.44
FYCO1-201ENST00000296137 TENM4Q6N022 2769 aa6.03□□□□□ -1.44
FYCO1-201ENST00000296137 SPTBN5Q9NRC6 3674 aaKnown RBP6.02□□□□□ -1.45
FYCO1-201ENST00000296137 KRTAP10-2P60368 255 aa6.02□□□□□ -1.45
FYCO1-201ENST00000296137 KRTAP10-8P60410 259 aa6.02□□□□□ -1.45
FYCO1-201ENST00000296137 MYO15AQ9UKN7 3530 aa6.02□□□□□ -1.45
FYCO1-201ENST00000296137 LAMA5O15230 3695 aa6.01□□□□□ -1.45
FYCO1-201ENST00000296137 DCHS1Q96JQ0 3298 aa6.01□□□□□ -1.45
FYCO1-201ENST00000296137 DMDP11532 3685 aa6□□□□□ -1.45
FYCO1-201ENST00000296137 ZFHX4Q86UP3 3567 aa5.95□□□□□ -1.46
FYCO1-201ENST00000296137 ZANQ9Y493 2812 aa5.95□□□□□ -1.46
FYCO1-201ENST00000296137 Q6ZRN7 208 aaPredicted RBP5.93□□□□□ -1.46
FYCO1-201ENST00000296137 KRTAP13-1Q8IUC0 172 aa5.92□□□□□ -1.46
FYCO1-201ENST00000296137 CSMD1Q96PZ7 3565 aa5.9□□□□□ -1.46
FYCO1-201ENST00000296137 PKD1L1Q8TDX9 2849 aa5.9□□□□□ -1.46
FYCO1-201ENST00000296137 LOC400499M0QZD8 3231 aa5.9□□□□□ -1.46
FYCO1-201ENST00000296137 KRTAP7-1Q8IUC3 87 aa5.9□□□□□ -1.46
FYCO1-201ENST00000296137 RELNP78509 3460 aa5.89□□□□□ -1.47
FYCO1-201ENST00000296137 FBN2P35556 2912 aa5.88□□□□□ -1.47
FYCO1-201ENST00000296137 VWFP04275 2813 aa5.88□□□□□ -1.47
FYCO1-201ENST00000296137 SMG1Q96Q15 3661 aaKnown RBP5.88□□□□□ -1.47
FYCO1-201ENST00000296137 EYSQ5T1H1 3165 aa5.85□□□□□ -1.47
FYCO1-201ENST00000296137 SPENQ96T58 3664 aaKnown RBP5.84□□□□□ -1.47
FYCO1-201ENST00000296137 KRTAP13-2Q52LG2 175 aa5.84□□□□□ -1.47
FYCO1-201ENST00000296137 MXRA5Q9NR99 2828 aa5.81□□□□□ -1.48
FYCO1-201ENST00000296137 INE1O15225 51 aa5.77□□□□□ -1.49
FYCO1-201ENST00000296137 NBPF19A0A087WUL8 3843 aa5.71□□□□□ -1.49
FYCO1-201ENST00000296137 KRTAP21-3Q3LHN1 58 aa5.71□□□□□ -1.49
FYCO1-201ENST00000296137 TPRXLQ17RH7 258 aa5.7□□□□□ -1.5
FYCO1-201ENST00000296137 HRNRQ86YZ3 2850 aaPredicted RBP5.7□□□□□ -1.5
FYCO1-201ENST00000296137 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
FYCO1-201ENST00000296137 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
FYCO1-201ENST00000296137 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
FYCO1-201ENST00000296137 TENM2Q9NT68 2774 aa5.65□□□□□ -1.51
FYCO1-201ENST00000296137 COL7A1Q02388 2944 aa5.63□□□□□ -1.51
FYCO1-201ENST00000296137 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
FYCO1-201ENST00000296137 OTOGQ6ZRI0 2925 aa5.6□□□□□ -1.51
FYCO1-201ENST00000296137 KRTAP13-3Q3SY46 172 aa5.57□□□□□ -1.52
FYCO1-201ENST00000296137 CUBNO60494 3623 aa5.55□□□□□ -1.52
FYCO1-201ENST00000296137 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
FYCO1-201ENST00000296137 XP32Q5T750 250 aa5.53□□□□□ -1.52
FYCO1-201ENST00000296137 AKAP9Q99996 3911 aa5.53□□□□□ -1.52
FYCO1-201ENST00000296137 VPS13CQ709C8 3753 aa5.52□□□□□ -1.53
FYCO1-201ENST00000296137 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
FYCO1-201ENST00000296137 SVEP1Q4LDE5 3571 aa5.51□□□□□ -1.53
FYCO1-201ENST00000296137 A0A1B0GVY2 172 aa5.5□□□□□ -1.53
FYCO1-201ENST00000296137 MEGF8Q7Z7M0 2845 aa5.48□□□□□ -1.53
FYCO1-201ENST00000296137 FBN1P35555 2871 aaKnown RBP5.45□□□□□ -1.54
FYCO1-201ENST00000296137 KRTAP1-4P0C5Y4 121 aa5.42□□□□□ -1.54
FYCO1-201ENST00000296137 MUC3AQ02505 3323 aa5.41□□□□□ -1.54
FYCO1-201ENST00000296137 ALMS1Q8TCU4 4167 aa5.41□□□□□ -1.54
FYCO1-201ENST00000296137 CSMD2Q7Z408 3487 aa5.31□□□□□ -1.56
FYCO1-201ENST00000296137 CSMD3Q7Z407 3707 aa5.3□□□□□ -1.56
FYCO1-201ENST00000296137 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
FYCO1-201ENST00000296137 FBN3Q75N90 2809 aa5.26□□□□□ -1.57
FYCO1-201ENST00000296137 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
FYCO1-201ENST00000296137 TRRAPQ9Y4A5 3859 aa5.18□□□□□ -1.58
FYCO1-201ENST00000296137 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
FYCO1-201ENST00000296137 BSNQ9UPA5 3926 aa5.02□□□□□ -1.61
FYCO1-201ENST00000296137 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
FYCO1-201ENST00000296137 KRTAP3-2Q9BYR7 98 aa4.92□□□□□ -1.62
FYCO1-201ENST00000296137 CMYA5Q8N3K9 4069 aa4.89□□□□□ -1.63
FYCO1-201ENST00000296137 KRTAP3-3Q9BYR6 98 aa4.86□□□□□ -1.63
FYCO1-201ENST00000296137 LYSTQ99698 3801 aa4.85□□□□□ -1.63
FYCO1-201ENST00000296137 KRTAP12-3P60328 96 aa4.84□□□□□ -1.64
FYCO1-201ENST00000296137 FRAS1Q86XX4 4008 aa4.77□□□□□ -1.65
FYCO1-201ENST00000296137 CRCT1Q9UGL9 99 aa4.77□□□□□ -1.65
FYCO1-201ENST00000296137 LCE3AQ5TA76 89 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms