RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 MYT1Q01538 1121 aa18.55■□□□□ 0.56
FYCO1-201ENST00000296137 PELP1Q8IZL8 1130 aaKnown RBP18.45■□□□□ 0.54
FYCO1-201ENST00000296137 ERICH6Q7L0X2 663 aa17.65■□□□□ 0.42
FYCO1-201ENST00000296137 CCER1Q8TC90 406 aaPredicted RBP17.49■□□□□ 0.39
FYCO1-201ENST00000296137 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
FYCO1-201ENST00000296137 CENPBP07199 599 aaPredicted RBP17.38■□□□□ 0.37
FYCO1-201ENST00000296137 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
FYCO1-201ENST00000296137 YTHDC1Q96MU7 727 aaKnown RBP17.06■□□□□ 0.32
FYCO1-201ENST00000296137 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
FYCO1-201ENST00000296137 NEFLP07196 543 aa16.79■□□□□ 0.28
FYCO1-201ENST00000296137 PCGF6Q9BYE7 350 aa16.79■□□□□ 0.28
FYCO1-201ENST00000296137 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
FYCO1-201ENST00000296137 DAXXQ9UER7 740 aaPredicted RBP16.52■□□□□ 0.24
FYCO1-201ENST00000296137 RTL5Q5HYW3 569 aaPredicted RBP16.45■□□□□ 0.22
FYCO1-201ENST00000296137 APLP2Q06481 763 aa16.38■□□□□ 0.21
FYCO1-201ENST00000296137 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
FYCO1-201ENST00000296137 GLIPR1L2Q4G1C9 344 aa16.28■□□□□ 0.2
FYCO1-201ENST00000296137 NISCHQ9Y2I1 1504 aa16.23■□□□□ 0.19
FYCO1-201ENST00000296137 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
FYCO1-201ENST00000296137 HRCP23327 699 aa16.21■□□□□ 0.18
FYCO1-201ENST00000296137 ZNF316A6NFI3 1004 aaPredicted RBP16.13■□□□□ 0.17
FYCO1-201ENST00000296137 EIF5BO60841 1220 aaKnown RBP16.05■□□□□ 0.16
FYCO1-201ENST00000296137 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
FYCO1-201ENST00000296137 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
FYCO1-201ENST00000296137 TRIM26Q12899 539 aaPredicted RBP15.88■□□□□ 0.13
FYCO1-201ENST00000296137 MYT1LQ9UL68 1186 aa15.85■□□□□ 0.13
FYCO1-201ENST00000296137 DIEXFQ68CQ4 756 aaKnown RBP15.78■□□□□ 0.12
FYCO1-201ENST00000296137 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
FYCO1-201ENST00000296137 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
FYCO1-201ENST00000296137 CLSPNQ9HAW4 1339 aa15.68■□□□□ 0.1
FYCO1-201ENST00000296137 RANGAP1P46060 587 aaPredicted RBP15.65■□□□□ 0.1
FYCO1-201ENST00000296137 ANP32AP39687 249 aaKnown RBP15.6■□□□□ 0.09
FYCO1-201ENST00000296137 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
FYCO1-201ENST00000296137 BCANQ96GW7 911 aa15.54■□□□□ 0.08
FYCO1-201ENST00000296137 ANP32BQ92688 251 aaKnown RBP15.53■□□□□ 0.08
FYCO1-201ENST00000296137 TNNT2P45379 298 aaPredicted RBP15.45■□□□□ 0.06
FYCO1-201ENST00000296137 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
FYCO1-201ENST00000296137 ATP1B4Q9UN42 357 aaPredicted RBP15.4■□□□□ 0.06
FYCO1-201ENST00000296137 BCL11AQ9H165 835 aa15.39■□□□□ 0.05
FYCO1-201ENST00000296137 NBR1Q14596 966 aa15.35■□□□□ 0.05
FYCO1-201ENST00000296137 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
FYCO1-201ENST00000296137 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
FYCO1-201ENST00000296137 ANP32EQ9BTT0 268 aa15.27■□□□□ 0.04
FYCO1-201ENST00000296137 CDK11BP21127 795 aaKnown RBP15.27■□□□□ 0.03
FYCO1-201ENST00000296137 NPM2Q86SE8 214 aaKnown RBP15.22■□□□□ 0.03
FYCO1-201ENST00000296137 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
FYCO1-201ENST00000296137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
FYCO1-201ENST00000296137 ZBTB47Q9UFB7 747 aaPredicted RBP15.17■□□□□ 0.02
FYCO1-201ENST00000296137 NCLP19338 710 aaKnown RBP15.15■□□□□ 0.02
FYCO1-201ENST00000296137 TRIM44Q96DX7 344 aaPredicted RBP15.15■□□□□ 0.02
FYCO1-201ENST00000296137 ANP32CO43423 234 aa15.15■□□□□ 0.02
FYCO1-201ENST00000296137 CNGB1Q14028 1251 aaPredicted RBP15.14■□□□□ 0.01
FYCO1-201ENST00000296137 HSP90AA1P07900 732 aaKnown RBP15.08■□□□□ 0
FYCO1-201ENST00000296137 ERICH6BQ5W0A0 696 aa15.07■□□□□ 0
FYCO1-201ENST00000296137 FKBP8Q14318 412 aa15.07■□□□□ 0
FYCO1-201ENST00000296137 ARXQ96QS3 562 aa15.04■□□□□ -0
FYCO1-201ENST00000296137 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
FYCO1-201ENST00000296137 UPF2Q9HAU5 1272 aaKnown RBP15.03■□□□□ -0
FYCO1-201ENST00000296137 NAP1L5Q96NT1 182 aaPredicted RBP15.03■□□□□ -0
FYCO1-201ENST00000296137 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
FYCO1-201ENST00000296137 ITGAEP38570 1179 aa14.99□□□□□ -0.01
FYCO1-201ENST00000296137 NEUROD1Q13562 356 aa14.98□□□□□ -0.01
FYCO1-201ENST00000296137 CANXP27824 592 aaKnown RBP14.96□□□□□ -0.01
FYCO1-201ENST00000296137 ZNF326Q5BKZ1 582 aaKnown RBP14.92□□□□□ -0.02
FYCO1-201ENST00000296137 NEFMP07197 916 aa14.91□□□□□ -0.02
FYCO1-201ENST00000296137 AMER1Q5JTC6 1135 aaPredicted RBP14.9□□□□□ -0.02
FYCO1-201ENST00000296137 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
FYCO1-201ENST00000296137 SLC4A1APQ9BWU0 796 aaKnown RBP14.86□□□□□ -0.03
FYCO1-201ENST00000296137 DDRGK1Q96HY6 314 aa14.86□□□□□ -0.03
FYCO1-201ENST00000296137 DNTTIP2Q5QJE6 756 aaKnown RBP14.82□□□□□ -0.04
FYCO1-201ENST00000296137 SLC24A1O60721 1099 aa14.81□□□□□ -0.04
FYCO1-201ENST00000296137 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.8□□□□□ -0.04
FYCO1-201ENST00000296137 CHIC1Q5VXU3 224 aa14.78□□□□□ -0.04
FYCO1-201ENST00000296137 CCDC136Q96JN2 1154 aa14.78□□□□□ -0.04
FYCO1-201ENST00000296137 DEKP35659 375 aaKnown RBP14.78□□□□□ -0.04
FYCO1-201ENST00000296137 BECN1Q14457 450 aa14.76□□□□□ -0.05
FYCO1-201ENST00000296137 PPM1GO15355 546 aaPredicted RBP14.72□□□□□ -0.05
FYCO1-201ENST00000296137 PTMAP06454 111 aaKnown RBP14.7□□□□□ -0.06
FYCO1-201ENST00000296137 NOP58Q9Y2X3 529 aaKnown RBP14.7□□□□□ -0.06
FYCO1-201ENST00000296137 GOLGA6L22H0YM25 854 aa14.68□□□□□ -0.06
FYCO1-201ENST00000296137 TNNT3P45378 269 aaPredicted RBP14.66□□□□□ -0.06
FYCO1-201ENST00000296137 HNRNPUQ00839 825 aaKnown RBP eCLIP14.66□□□□□ -0.06
FYCO1-201ENST00000296137 CHAF1AQ13111 956 aaPredicted RBP14.63□□□□□ -0.07
FYCO1-201ENST00000296137 PTMSP20962 102 aa14.6□□□□□ -0.07
FYCO1-201ENST00000296137 MSNP26038 577 aaKnown RBP14.6□□□□□ -0.07
FYCO1-201ENST00000296137 HSP90AA2PQ14568 343 aaPredicted RBP14.59□□□□□ -0.07
FYCO1-201ENST00000296137 CCDC180Q9P1Z9 1646 aa14.59□□□□□ -0.07
FYCO1-201ENST00000296137 L1TD1Q5T7N2 865 aaKnown RBP14.59□□□□□ -0.07
FYCO1-201ENST00000296137 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.58□□□□□ -0.08
FYCO1-201ENST00000296137 RSPH6AQ9H0K4 717 aa14.57□□□□□ -0.08
FYCO1-201ENST00000296137 PODXL2Q9NZ53 605 aa14.55□□□□□ -0.08
FYCO1-201ENST00000296137 ARID4BQ4LE39 1312 aaPredicted RBP14.55□□□□□ -0.08
FYCO1-201ENST00000296137 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
FYCO1-201ENST00000296137 VSIG10Q8N0Z9 540 aa14.53□□□□□ -0.08
FYCO1-201ENST00000296137 CALRP27797 417 aaKnown RBP14.53□□□□□ -0.08
FYCO1-201ENST00000296137 LAS1LQ9Y4W2 734 aaKnown RBP14.53□□□□□ -0.08
FYCO1-201ENST00000296137 FAM50AQ14320 339 aaKnown RBP14.52□□□□□ -0.08
FYCO1-201ENST00000296137 TRIM52Q96A61 297 aa14.51□□□□□ -0.09
FYCO1-201ENST00000296137 PRKCSHP14314 528 aaPredicted RBP14.51□□□□□ -0.09
FYCO1-201ENST00000296137 DCAF1Q9Y4B6 1507 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms