RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 C7orf65Q6ZTY9 151 aa5.91□□□□□ -1.46
HMGCR-201ENST00000287936 A0A1B0GU69 56 aa5.91□□□□□ -1.46
HMGCR-201ENST00000287936 SPINK1P00995 79 aa5.91□□□□□ -1.46
HMGCR-201ENST00000287936 KRTAP10-2P60368 255 aa5.91□□□□□ -1.46
HMGCR-201ENST00000287936 HRES1P13985 223 aa5.9□□□□□ -1.46
HMGCR-201ENST00000287936 ATP11AUNQ6ZP68 121 aa5.9□□□□□ -1.47
HMGCR-201ENST00000287936 PKD1L1Q8TDX9 2849 aa5.9□□□□□ -1.47
HMGCR-201ENST00000287936 LINC00304Q8N9R0 145 aa5.89□□□□□ -1.47
HMGCR-201ENST00000287936 A0A087X002 238 aa5.88□□□□□ -1.47
HMGCR-201ENST00000287936 NOTCH2NLQ7Z3S9 236 aa5.88□□□□□ -1.47
HMGCR-201ENST00000287936 FBN1P35555 2871 aaKnown RBP5.88□□□□□ -1.47
HMGCR-201ENST00000287936 KRTAP10-1P60331 282 aa5.87□□□□□ -1.47
HMGCR-201ENST00000287936 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
HMGCR-201ENST00000287936 Q5W150 140 aa5.87□□□□□ -1.47
HMGCR-201ENST00000287936 PRR26Q8N8Z3 221 aa5.86□□□□□ -1.47
HMGCR-201ENST00000287936 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
HMGCR-201ENST00000287936 HUWE1Q7Z6Z7 4374 aaKnown RBP5.8□□□□□ -1.48
HMGCR-201ENST00000287936 KRTAP13-2Q52LG2 175 aa5.79□□□□□ -1.48
HMGCR-201ENST00000287936 UQCR11O14957 56 aa5.78□□□□□ -1.48
HMGCR-201ENST00000287936 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
HMGCR-201ENST00000287936 Q6ZSA8 131 aa5.77□□□□□ -1.49
HMGCR-201ENST00000287936 SMR3BP02814 79 aaPredicted RBP5.76□□□□□ -1.49
HMGCR-201ENST00000287936 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
HMGCR-201ENST00000287936 SPINK7P58062 85 aa5.73□□□□□ -1.49
HMGCR-201ENST00000287936 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
HMGCR-201ENST00000287936 C9orf92A6NGG3 77 aa5.72□□□□□ -1.49
HMGCR-201ENST00000287936 LCA10Q71F78 164 aa5.72□□□□□ -1.49
HMGCR-201ENST00000287936 K7ERS5 55 aa5.71□□□□□ -1.5
HMGCR-201ENST00000287936 Q8N1X5 172 aa5.7□□□□□ -1.5
HMGCR-201ENST00000287936 KRTAP1-4P0C5Y4 121 aa5.69□□□□□ -1.5
HMGCR-201ENST00000287936 KRTAP13-3Q3SY46 172 aa5.67□□□□□ -1.5
HMGCR-201ENST00000287936 KRTAP21-3Q3LHN1 58 aa5.65□□□□□ -1.5
HMGCR-201ENST00000287936 A8MU10 97 aa5.63□□□□□ -1.51
HMGCR-201ENST00000287936 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
HMGCR-201ENST00000287936 DNAH9Q9NYC9 4486 aa5.62□□□□□ -1.51
HMGCR-201ENST00000287936 DNAH3Q8TD57 4116 aa5.62□□□□□ -1.51
HMGCR-201ENST00000287936 A6NN06 94 aa5.6□□□□□ -1.51
HMGCR-201ENST00000287936 TENM2Q9NT68 2774 aa5.6□□□□□ -1.51
HMGCR-201ENST00000287936 SPATA8Q6RVD6 105 aa5.58□□□□□ -1.52
HMGCR-201ENST00000287936 RBM12B-AS1Q9P1G2 102 aa5.56□□□□□ -1.52
HMGCR-201ENST00000287936 SRRM2Q9UQ35 2752 aaKnown RBP5.55□□□□□ -1.52
HMGCR-201ENST00000287936 CMYA5Q8N3K9 4069 aa5.55□□□□□ -1.52
HMGCR-201ENST00000287936 TGP01266 2768 aa5.55□□□□□ -1.52
HMGCR-201ENST00000287936 DNAH1Q9P2D7 4330 aa5.54□□□□□ -1.52
HMGCR-201ENST00000287936 A8MUU9 505 aa5.53□□□□□ -1.52
HMGCR-201ENST00000287936 C20orf166-AS1Q96NR2 134 aa5.53□□□□□ -1.52
HMGCR-201ENST00000287936 A0A1B0GU33 70 aa5.53□□□□□ -1.52
HMGCR-201ENST00000287936 DNAH10Q8IVF4 4471 aa5.51□□□□□ -1.53
HMGCR-201ENST00000287936 PLECQ15149 4684 aaKnown RBP5.5□□□□□ -1.53
HMGCR-201ENST00000287936 COX6B2Q6YFQ2 88 aa5.49□□□□□ -1.53
HMGCR-201ENST00000287936 VPS13DQ5THJ4 4388 aa5.48□□□□□ -1.53
HMGCR-201ENST00000287936 MEGF8Q7Z7M0 2845 aa5.47□□□□□ -1.53
HMGCR-201ENST00000287936 Q5VSD8 79 aa5.46□□□□□ -1.54
HMGCR-201ENST00000287936 ANK2Q01484 3957 aa5.46□□□□□ -1.54
HMGCR-201ENST00000287936 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
HMGCR-201ENST00000287936 DYNC2H1Q8NCM8 4307 aaKnown RBP5.45□□□□□ -1.54
HMGCR-201ENST00000287936 H1FX-AS1Q4G0G2 97 aa5.45□□□□□ -1.54
HMGCR-201ENST00000287936 DNAH17Q9UFH2 4485 aa5.44□□□□□ -1.54
HMGCR-201ENST00000287936 COL7A1Q02388 2944 aa5.43□□□□□ -1.54
HMGCR-201ENST00000287936 A0A1B0GVY2 172 aa5.42□□□□□ -1.54
HMGCR-201ENST00000287936 FBN3Q75N90 2809 aa5.39□□□□□ -1.55
HMGCR-201ENST00000287936 S4R3F8 94 aa5.39□□□□□ -1.55
HMGCR-201ENST00000287936 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
HMGCR-201ENST00000287936 RPL37P61927 97 aaKnown RBP5.37□□□□□ -1.55
HMGCR-201ENST00000287936 STARD9Q9P2P6 4700 aa5.36□□□□□ -1.55
HMGCR-201ENST00000287936 ALMS1Q8TCU4 4167 aa5.36□□□□□ -1.55
HMGCR-201ENST00000287936 CSAG1Q6PB30 78 aa5.35□□□□□ -1.55
HMGCR-201ENST00000287936 A0A0D9SG42 100 aa5.32□□□□□ -1.56
HMGCR-201ENST00000287936 DNAH8Q96JB1 4490 aa5.31□□□□□ -1.56
HMGCR-201ENST00000287936 ADM2Q7Z4H4 148 aa5.31□□□□□ -1.56
HMGCR-201ENST00000287936 CSMD3Q7Z407 3707 aa5.31□□□□□ -1.56
HMGCR-201ENST00000287936 H0YAA0 97 aa5.28□□□□□ -1.56
HMGCR-201ENST00000287936 KRTAP10-8P60410 259 aa5.27□□□□□ -1.57
HMGCR-201ENST00000287936 DMBT1Q9UGM3 2413 aaPredicted RBP5.27□□□□□ -1.57
HMGCR-201ENST00000287936 DNAH2Q9P225 4427 aa5.27□□□□□ -1.57
HMGCR-201ENST00000287936 XP32Q5T750 250 aa5.26□□□□□ -1.57
HMGCR-201ENST00000287936 KRTAP10-4P60372 401 aaPredicted RBP5.25□□□□□ -1.57
HMGCR-201ENST00000287936 PRKDCP78527 4128 aaKnown RBP5.25□□□□□ -1.57
HMGCR-201ENST00000287936 DNAH11Q96DT5 4516 aa5.24□□□□□ -1.57
HMGCR-201ENST00000287936 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
HMGCR-201ENST00000287936 ROMO1P60602 79 aa5.24□□□□□ -1.57
HMGCR-201ENST00000287936 J3QL48 77 aa5.23□□□□□ -1.57
HMGCR-201ENST00000287936 LYSTQ99698 3801 aa5.23□□□□□ -1.57
HMGCR-201ENST00000287936 CRIPTQ9P021 101 aa5.23□□□□□ -1.57
HMGCR-201ENST00000287936 DNAH6Q9C0G6 4158 aa5.22□□□□□ -1.57
HMGCR-201ENST00000287936 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.57
HMGCR-201ENST00000287936 DNAH7Q8WXX0 4024 aa5.2□□□□□ -1.58
HMGCR-201ENST00000287936 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
HMGCR-201ENST00000287936 HECTD4Q9Y4D8 3996 aa5.19□□□□□ -1.58
HMGCR-201ENST00000287936 SEC61BP60468 96 aaKnown RBP5.18□□□□□ -1.58
HMGCR-201ENST00000287936 KMT2AQ03164 3969 aa5.18□□□□□ -1.58
HMGCR-201ENST00000287936 FLG2Q5D862 2391 aaPredicted RBP5.17□□□□□ -1.58
HMGCR-201ENST00000287936 DNAH5Q8TE73 4624 aa5.16□□□□□ -1.58
HMGCR-201ENST00000287936 LRP1BQ9NZR2 4599 aa5.14□□□□□ -1.59
HMGCR-201ENST00000287936 TPRXLQ17RH7 258 aa5.13□□□□□ -1.59
HMGCR-201ENST00000287936 M0QZ58 72 aa5.12□□□□□ -1.59
HMGCR-201ENST00000287936 R4GN34 69 aa5.08□□□□□ -1.6
HMGCR-201ENST00000287936 FRAS1Q86XX4 4008 aa5.08□□□□□ -1.6
HMGCR-201ENST00000287936 DNHD1Q96M86 4753 aa5.07□□□□□ -1.6
HMGCR-201ENST00000287936 DYNC1H1Q14204 4646 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms