RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ACYP2P14621 99 aa8.07□□□□□ -1.12
SCAF4-201ENST00000286835 SPACA4Q8TDM5 124 aa8.07□□□□□ -1.12
SCAF4-201ENST00000286835 CDC42SE1Q9NRR8 79 aa8.07□□□□□ -1.12
SCAF4-201ENST00000286835 ZNF861PO60384 105 aa8.06□□□□□ -1.12
SCAF4-201ENST00000286835 A0A1B0GU69 56 aa8.05□□□□□ -1.12
SCAF4-201ENST00000286835 RBM12B-AS1Q9P1G2 102 aa8.02□□□□□ -1.13
SCAF4-201ENST00000286835 LINC00313P59037 77 aa8.02□□□□□ -1.13
SCAF4-201ENST00000286835 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.13
SCAF4-201ENST00000286835 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
SCAF4-201ENST00000286835 PLA2G1BP04054 148 aaKnown RBP8.01□□□□□ -1.13
SCAF4-201ENST00000286835 Q96NJ1 140 aa7.99□□□□□ -1.13
SCAF4-201ENST00000286835 TYMSOSQ8TAI1 123 aa7.98□□□□□ -1.13
SCAF4-201ENST00000286835 Q5W150 140 aa7.98□□□□□ -1.13
SCAF4-201ENST00000286835 C7orf65Q6ZTY9 151 aa7.97□□□□□ -1.13
SCAF4-201ENST00000286835 FAM229AH3BQW9 127 aa7.97□□□□□ -1.13
SCAF4-201ENST00000286835 IGLV7-43P04211 117 aa7.96□□□□□ -1.14
SCAF4-201ENST00000286835 Q6ZR54 194 aa7.96□□□□□ -1.14
SCAF4-201ENST00000286835 PRAC1Q96KF2 57 aa7.94□□□□□ -1.14
SCAF4-201ENST00000286835 KRTAP13-1Q8IUC0 172 aa7.93□□□□□ -1.14
SCAF4-201ENST00000286835 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
SCAF4-201ENST00000286835 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
SCAF4-201ENST00000286835 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
SCAF4-201ENST00000286835 LINC00483Q53H64 154 aa7.88□□□□□ -1.15
SCAF4-201ENST00000286835 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
SCAF4-201ENST00000286835 A6NN06 94 aa7.86□□□□□ -1.15
SCAF4-201ENST00000286835 SSBP3-AS1Q7Z2R9 100 aa7.86□□□□□ -1.15
SCAF4-201ENST00000286835 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
SCAF4-201ENST00000286835 UQCR11O14957 56 aa7.85□□□□□ -1.15
SCAF4-201ENST00000286835 PLAC8Q9NZF1 115 aa7.84□□□□□ -1.15
SCAF4-201ENST00000286835 KRTAP10-1P60331 282 aa7.83□□□□□ -1.16
SCAF4-201ENST00000286835 Q8N1X5 172 aa7.83□□□□□ -1.16
SCAF4-201ENST00000286835 FBN3Q75N90 2809 aa7.82□□□□□ -1.16
SCAF4-201ENST00000286835 ANK2Q01484 3957 aa7.81□□□□□ -1.16
SCAF4-201ENST00000286835 DNAH10Q8IVF4 4471 aa7.79□□□□□ -1.16
SCAF4-201ENST00000286835 ADM2Q7Z4H4 148 aa7.79□□□□□ -1.16
SCAF4-201ENST00000286835 ASB16-AS1Q495Z4 193 aa7.78□□□□□ -1.16
SCAF4-201ENST00000286835 LINC00304Q8N9R0 145 aa7.78□□□□□ -1.16
SCAF4-201ENST00000286835 DMAC1Q96GE9 116 aa7.75□□□□□ -1.17
SCAF4-201ENST00000286835 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
SCAF4-201ENST00000286835 KRTAP21-3Q3LHN1 58 aa7.72□□□□□ -1.17
SCAF4-201ENST00000286835 MEGF8Q7Z7M0 2845 aa7.69□□□□□ -1.18
SCAF4-201ENST00000286835 HUWE1Q7Z6Z7 4374 aaKnown RBP7.68□□□□□ -1.18
SCAF4-201ENST00000286835 LYSTQ99698 3801 aa7.65□□□□□ -1.18
SCAF4-201ENST00000286835 J3QL48 77 aa7.65□□□□□ -1.19
SCAF4-201ENST00000286835 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
SCAF4-201ENST00000286835 CSAG1Q6PB30 78 aa7.64□□□□□ -1.19
SCAF4-201ENST00000286835 LINC01554Q52M75 96 aa7.63□□□□□ -1.19
SCAF4-201ENST00000286835 K7ERS5 55 aa7.59□□□□□ -1.19
SCAF4-201ENST00000286835 SPATA8Q6RVD6 105 aa7.59□□□□□ -1.19
SCAF4-201ENST00000286835 KRTAP13-3Q3SY46 172 aa7.57□□□□□ -1.2
SCAF4-201ENST00000286835 Q5VSD8 79 aa7.54□□□□□ -1.2
SCAF4-201ENST00000286835 CRIPTQ9P021 101 aa7.53□□□□□ -1.2
SCAF4-201ENST00000286835 DNAH9Q9NYC9 4486 aa7.52□□□□□ -1.21
SCAF4-201ENST00000286835 A0A1B0GU33 70 aa7.49□□□□□ -1.21
SCAF4-201ENST00000286835 PLECQ15149 4684 aaKnown RBP7.46□□□□□ -1.21
SCAF4-201ENST00000286835 KRTAP16-1A8MUX0 517 aa7.44□□□□□ -1.22
SCAF4-201ENST00000286835 A0A0D9SG42 100 aa7.42□□□□□ -1.22
SCAF4-201ENST00000286835 KRTAP1-4P0C5Y4 121 aa7.4□□□□□ -1.22
SCAF4-201ENST00000286835 H3BS24 57 aa7.4□□□□□ -1.22
SCAF4-201ENST00000286835 DNAH7Q8WXX0 4024 aa7.39□□□□□ -1.23
SCAF4-201ENST00000286835 CMYA5Q8N3K9 4069 aa7.38□□□□□ -1.23
SCAF4-201ENST00000286835 DNAH1Q9P2D7 4330 aa7.37□□□□□ -1.23
SCAF4-201ENST00000286835 FRAS1Q86XX4 4008 aa7.36□□□□□ -1.23
SCAF4-201ENST00000286835 Q6ZSA8 131 aa7.35□□□□□ -1.23
SCAF4-201ENST00000286835 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
SCAF4-201ENST00000286835 H0YAA0 97 aa7.3□□□□□ -1.24
SCAF4-201ENST00000286835 DNAH8Q96JB1 4490 aa7.29□□□□□ -1.24
SCAF4-201ENST00000286835 STARD9Q9P2P6 4700 aa7.29□□□□□ -1.24
SCAF4-201ENST00000286835 SPINT4Q6UDR6 99 aa7.28□□□□□ -1.24
SCAF4-201ENST00000286835 DNAH3Q8TD57 4116 aa7.28□□□□□ -1.24
SCAF4-201ENST00000286835 COX6B2Q6YFQ2 88 aa7.28□□□□□ -1.24
SCAF4-201ENST00000286835 DNHD1Q96M86 4753 aa7.27□□□□□ -1.25
SCAF4-201ENST00000286835 KMT2AQ03164 3969 aa7.27□□□□□ -1.25
SCAF4-201ENST00000286835 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
SCAF4-201ENST00000286835 DNAH11Q96DT5 4516 aa7.22□□□□□ -1.25
SCAF4-201ENST00000286835 A8MUU9 505 aa7.2□□□□□ -1.26
SCAF4-201ENST00000286835 DNAH17Q9UFH2 4485 aa7.17□□□□□ -1.26
SCAF4-201ENST00000286835 PRKDCP78527 4128 aaKnown RBP7.14□□□□□ -1.27
SCAF4-201ENST00000286835 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
SCAF4-201ENST00000286835 RPL37P61927 97 aaKnown RBP7.13□□□□□ -1.27
SCAF4-201ENST00000286835 VPS13DQ5THJ4 4388 aa7.13□□□□□ -1.27
SCAF4-201ENST00000286835 HECTD4Q9Y4D8 3996 aa7.11□□□□□ -1.27
SCAF4-201ENST00000286835 ROMO1P60602 79 aa7.11□□□□□ -1.27
SCAF4-201ENST00000286835 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
SCAF4-201ENST00000286835 RPS29P62273 56 aaKnown RBP7.09□□□□□ -1.27
SCAF4-201ENST00000286835 DNAH6Q9C0G6 4158 aa7.09□□□□□ -1.27
SCAF4-201ENST00000286835 LRP1BQ9NZR2 4599 aa7.08□□□□□ -1.28
SCAF4-201ENST00000286835 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
SCAF4-201ENST00000286835 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
SCAF4-201ENST00000286835 S4R3F8 94 aa7.07□□□□□ -1.28
SCAF4-201ENST00000286835 ALMS1Q8TCU4 4167 aa7.02□□□□□ -1.29
SCAF4-201ENST00000286835 C10orf95Q9H7T3 257 aa7.01□□□□□ -1.29
SCAF4-201ENST00000286835 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
SCAF4-201ENST00000286835 VPS13BQ7Z7G8 4022 aa6.94□□□□□ -1.3
SCAF4-201ENST00000286835 DYNC2H1Q8NCM8 4307 aaKnown RBP6.93□□□□□ -1.3
SCAF4-201ENST00000286835 M0R2T5 61 aa6.93□□□□□ -1.3
SCAF4-201ENST00000286835 DNAH5Q8TE73 4624 aa6.92□□□□□ -1.3
SCAF4-201ENST00000286835 P0C880 135 aa6.91□□□□□ -1.3
SCAF4-201ENST00000286835 FAT1Q14517 4588 aa6.87□□□□□ -1.31
SCAF4-201ENST00000286835 KRTAP13-4Q3LI77 160 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms