RNA–Protein interactions for RNA: ENST00000279242.6

MRPL49-201, Transcript of mitochondrial ribosomal protein L49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL49, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-201ENST00000279242 IGLV7-43P04211 117 aa9.42□□□□□ -0.9
MRPL49-201ENST00000279242 FBN3Q75N90 2809 aa9.41□□□□□ -0.9
MRPL49-201ENST00000279242 PRKDCP78527 4128 aaKnown RBP9.41□□□□□ -0.9
MRPL49-201ENST00000279242 ATP11AUNQ6ZP68 121 aa9.39□□□□□ -0.91
MRPL49-201ENST00000279242 PLECQ15149 4684 aaKnown RBP9.39□□□□□ -0.91
MRPL49-201ENST00000279242 HRES1P13985 223 aa9.39□□□□□ -0.91
MRPL49-201ENST00000279242 ANAPC11Q9NYG5 84 aa9.39□□□□□ -0.91
MRPL49-201ENST00000279242 A0A087X002 238 aa9.38□□□□□ -0.91
MRPL49-201ENST00000279242 KRTAP13-3Q3SY46 172 aa9.38□□□□□ -0.91
MRPL49-201ENST00000279242 NOTCH2NLQ7Z3S9 236 aa9.38□□□□□ -0.91
MRPL49-201ENST00000279242 A6NED7 52 aa9.37□□□□□ -0.91
MRPL49-201ENST00000279242 C1orf134Q5TEV5 83 aa9.36□□□□□ -0.91
MRPL49-201ENST00000279242 CDC42SE1Q9NRR8 79 aa9.35□□□□□ -0.91
MRPL49-201ENST00000279242 VPS13DQ5THJ4 4388 aa9.35□□□□□ -0.91
MRPL49-201ENST00000279242 SPAG11AQ6PDA7 123 aa9.34□□□□□ -0.91
MRPL49-201ENST00000279242 SPINK6Q6UWN8 80 aa9.32□□□□□ -0.92
MRPL49-201ENST00000279242 LCA10Q71F78 164 aa9.32□□□□□ -0.92
MRPL49-201ENST00000279242 CIRBP-AS1Q8TBR5 109 aa9.32□□□□□ -0.92
MRPL49-201ENST00000279242 HECTD4Q9Y4D8 3996 aa9.31□□□□□ -0.92
MRPL49-201ENST00000279242 ACYP2P14621 99 aa9.31□□□□□ -0.92
MRPL49-201ENST00000279242 Q5W150 140 aa9.31□□□□□ -0.92
MRPL49-201ENST00000279242 A8MU10 97 aa9.29□□□□□ -0.92
MRPL49-201ENST00000279242 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
MRPL49-201ENST00000279242 LINC00313P59037 77 aa9.27□□□□□ -0.93
MRPL49-201ENST00000279242 SEC61GP60059 68 aa9.26□□□□□ -0.93
MRPL49-201ENST00000279242 DMAC1Q96GE9 116 aa9.24□□□□□ -0.93
MRPL49-201ENST00000279242 TGP01266 2768 aa9.24□□□□□ -0.93
MRPL49-201ENST00000279242 SPTSSBQ8NFR3 76 aa9.24□□□□□ -0.93
MRPL49-201ENST00000279242 STARD9Q9P2P6 4700 aa9.23□□□□□ -0.93
MRPL49-201ENST00000279242 DNAH17Q9UFH2 4485 aa9.23□□□□□ -0.93
MRPL49-201ENST00000279242 KTN1-AS1Q86SY8 53 aa9.23□□□□□ -0.93
MRPL49-201ENST00000279242 DNAH8Q96JB1 4490 aa9.23□□□□□ -0.93
MRPL49-201ENST00000279242 A6NN06 94 aa9.19□□□□□ -0.94
MRPL49-201ENST00000279242 IGKV2-30P06310 120 aa9.17□□□□□ -0.94
MRPL49-201ENST00000279242 PRR26Q8N8Z3 221 aa9.17□□□□□ -0.94
MRPL49-201ENST00000279242 FRAS1Q86XX4 4008 aa9.16□□□□□ -0.94
MRPL49-201ENST00000279242 SPINK7P58062 85 aa9.15□□□□□ -0.94
MRPL49-201ENST00000279242 Q6ZSA8 131 aa9.15□□□□□ -0.94
MRPL49-201ENST00000279242 KRTAP13-2Q52LG2 175 aa9.14□□□□□ -0.95
MRPL49-201ENST00000279242 LY6G6CO95867 125 aa9.14□□□□□ -0.95
MRPL49-201ENST00000279242 KRTAP16-1A8MUX0 517 aa9.12□□□□□ -0.95
MRPL49-201ENST00000279242 KMT2AQ03164 3969 aa9.11□□□□□ -0.95
MRPL49-201ENST00000279242 DNAH2Q9P225 4427 aa9.11□□□□□ -0.95
MRPL49-201ENST00000279242 KRTAP10-2P60368 255 aa9.1□□□□□ -0.95
MRPL49-201ENST00000279242 C7orf65Q6ZTY9 151 aa9.07□□□□□ -0.96
MRPL49-201ENST00000279242 ALMS1Q8TCU4 4167 aa9.06□□□□□ -0.96
MRPL49-201ENST00000279242 DNAH6Q9C0G6 4158 aa9.04□□□□□ -0.96
MRPL49-201ENST00000279242 A0A1B0GU69 56 aa9.04□□□□□ -0.96
MRPL49-201ENST00000279242 KRTAP1-4P0C5Y4 121 aa9.04□□□□□ -0.96
MRPL49-201ENST00000279242 C4orf48Q5BLP8 95 aa9.03□□□□□ -0.96
MRPL49-201ENST00000279242 SPINK1P00995 79 aa9.02□□□□□ -0.97
MRPL49-201ENST00000279242 KRTAP10-1P60331 282 aa9.02□□□□□ -0.97
MRPL49-201ENST00000279242 RETNLBQ9BQ08 111 aa8.99□□□□□ -0.97
MRPL49-201ENST00000279242 SPATA8Q6RVD6 105 aa8.98□□□□□ -0.97
MRPL49-201ENST00000279242 RPS29P62273 56 aaKnown RBP8.98□□□□□ -0.97
MRPL49-201ENST00000279242 IGKV2D-30A0A075B6S6 120 aa8.97□□□□□ -0.97
MRPL49-201ENST00000279242 RBM12B-AS1Q9P1G2 102 aa8.96□□□□□ -0.98
MRPL49-201ENST00000279242 DNAH11Q96DT5 4516 aa8.96□□□□□ -0.98
MRPL49-201ENST00000279242 TYMSOSQ8TAI1 123 aa8.95□□□□□ -0.98
MRPL49-201ENST00000279242 PLA2G1BP04054 148 aaKnown RBP8.95□□□□□ -0.98
MRPL49-201ENST00000279242 UQCR11O14957 56 aa8.94□□□□□ -0.98
MRPL49-201ENST00000279242 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
MRPL49-201ENST00000279242 MIR22HGQ0VDD5 57 aa8.88□□□□□ -0.99
MRPL49-201ENST00000279242 KMT2CQ8NEZ4 4911 aaKnown RBP8.84□□□□□ -0.99
MRPL49-201ENST00000279242 LINC00304Q8N9R0 145 aa8.84□□□□□ -0.99
MRPL49-201ENST00000279242 PKD1P98161 4303 aa8.81□□□□□ -1
MRPL49-201ENST00000279242 LRP1BQ9NZR2 4599 aa8.8□□□□□ -1
MRPL49-201ENST00000279242 SACSQ9NZJ4 4579 aa8.79□□□□□ -1
MRPL49-201ENST00000279242 HYDINQ4G0P3 5121 aa8.79□□□□□ -1
MRPL49-201ENST00000279242 VPS13BQ7Z7G8 4022 aa8.74□□□□□ -1.01
MRPL49-201ENST00000279242 C20orf166-AS1Q96NR2 134 aa8.74□□□□□ -1.01
MRPL49-201ENST00000279242 RYR3Q15413 4870 aa8.74□□□□□ -1.01
MRPL49-201ENST00000279242 A8MUU9 505 aa8.73□□□□□ -1.01
MRPL49-201ENST00000279242 FAT2Q9NYQ8 4349 aa8.73□□□□□ -1.01
MRPL49-201ENST00000279242 RYR2Q92736 4967 aa8.72□□□□□ -1.01
MRPL49-201ENST00000279242 Q8N1X5 172 aa8.7□□□□□ -1.02
MRPL49-201ENST00000279242 PRAC1Q96KF2 57 aa8.63□□□□□ -1.03
MRPL49-201ENST00000279242 ADM2Q7Z4H4 148 aa8.58□□□□□ -1.04
MRPL49-201ENST00000279242 C9orf92A6NGG3 77 aa8.56□□□□□ -1.04
MRPL49-201ENST00000279242 KRTAP3-1Q9BYR8 98 aa8.55□□□□□ -1.04
MRPL49-201ENST00000279242 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
MRPL49-201ENST00000279242 KRTAP10-4P60372 401 aaPredicted RBP8.54□□□□□ -1.04
MRPL49-201ENST00000279242 A0A1B0GU33 70 aa8.53□□□□□ -1.04
MRPL49-201ENST00000279242 H0YAA0 97 aa8.52□□□□□ -1.05
MRPL49-201ENST00000279242 SMR3BP02814 79 aaPredicted RBP8.52□□□□□ -1.05
MRPL49-201ENST00000279242 A0A1B0GVY2 172 aa8.5□□□□□ -1.05
MRPL49-201ENST00000279242 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
MRPL49-201ENST00000279242 COX6B2Q6YFQ2 88 aa8.49□□□□□ -1.05
MRPL49-201ENST00000279242 PKHD1L1Q86WI1 4243 aa8.46□□□□□ -1.05
MRPL49-201ENST00000279242 CSAG1Q6PB30 78 aa8.44□□□□□ -1.06
MRPL49-201ENST00000279242 EPPK1P58107 5090 aaKnown RBP8.44□□□□□ -1.06
MRPL49-201ENST00000279242 PKHD1P08F94 4074 aa8.42□□□□□ -1.06
MRPL49-201ENST00000279242 APOBP04114 4563 aaKnown RBP8.38□□□□□ -1.07
MRPL49-201ENST00000279242 K7ERS5 55 aa8.37□□□□□ -1.07
MRPL49-201ENST00000279242 DYNC1H1Q14204 4646 aaKnown RBP8.35□□□□□ -1.07
MRPL49-201ENST00000279242 FLG2Q5D862 2391 aaPredicted RBP8.31□□□□□ -1.08
MRPL49-201ENST00000279242 KRTAP25-1Q3LHN0 102 aa8.29□□□□□ -1.08
MRPL49-201ENST00000279242 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
MRPL49-201ENST00000279242 RPL37P61927 97 aaKnown RBP8.27□□□□□ -1.09
MRPL49-201ENST00000279242 FAT1Q14517 4588 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms