RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.32
USP6NL-201ENST00000277575 HRES1P13985 223 aa6.82□□□□□ -1.32
USP6NL-201ENST00000277575 PKD1L1Q8TDX9 2849 aa6.81□□□□□ -1.32
USP6NL-201ENST00000277575 CMYA5Q8N3K9 4069 aa6.81□□□□□ -1.32
USP6NL-201ENST00000277575 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
USP6NL-201ENST00000277575 PANO1I0J062 215 aa6.8□□□□□ -1.32
USP6NL-201ENST00000277575 Q6ZR54 194 aa6.8□□□□□ -1.32
USP6NL-201ENST00000277575 Q8N9P0 234 aaPredicted RBP6.79□□□□□ -1.32
USP6NL-201ENST00000277575 ZCCHC13Q8WW36 166 aaKnown RBP6.78□□□□□ -1.32
USP6NL-201ENST00000277575 A0A0D9SG42 100 aa6.77□□□□□ -1.33
USP6NL-201ENST00000277575 KRTAP4-16G5E9R7 235 aaPredicted RBP6.76□□□□□ -1.33
USP6NL-201ENST00000277575 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
USP6NL-201ENST00000277575 Q5VSD8 79 aa6.75□□□□□ -1.33
USP6NL-201ENST00000277575 SPINT4Q6UDR6 99 aa6.75□□□□□ -1.33
USP6NL-201ENST00000277575 LYSTQ99698 3801 aa6.73□□□□□ -1.33
USP6NL-201ENST00000277575 TENM3Q9P273 2699 aa6.72□□□□□ -1.33
USP6NL-201ENST00000277575 FBN1P35555 2871 aaKnown RBP6.72□□□□□ -1.33
USP6NL-201ENST00000277575 Q5W150 140 aa6.72□□□□□ -1.33
USP6NL-201ENST00000277575 LINC00483Q53H64 154 aa6.71□□□□□ -1.34
USP6NL-201ENST00000277575 SPINK7P58062 85 aa6.7□□□□□ -1.34
USP6NL-201ENST00000277575 Q1T7F1 81 aa6.69□□□□□ -1.34
USP6NL-201ENST00000277575 CDC42SE1Q9NRR8 79 aa6.69□□□□□ -1.34
USP6NL-201ENST00000277575 CYSTM1Q9H1C7 97 aa6.68□□□□□ -1.34
USP6NL-201ENST00000277575 A0A1B0GU33 70 aa6.67□□□□□ -1.34
USP6NL-201ENST00000277575 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
USP6NL-201ENST00000277575 M0R2T5 61 aa6.66□□□□□ -1.34
USP6NL-201ENST00000277575 CSAG1Q6PB30 78 aa6.65□□□□□ -1.34
USP6NL-201ENST00000277575 A0A087X002 238 aa6.65□□□□□ -1.34
USP6NL-201ENST00000277575 SEC61BP60468 96 aaKnown RBP6.62□□□□□ -1.35
USP6NL-201ENST00000277575 KRTAP11-1Q8IUC1 163 aa6.62□□□□□ -1.35
USP6NL-201ENST00000277575 LINC01558Q9Y6Z2 57 aa6.61□□□□□ -1.35
USP6NL-201ENST00000277575 KTN1-AS1Q86SY8 53 aa6.61□□□□□ -1.35
USP6NL-201ENST00000277575 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.35
USP6NL-201ENST00000277575 Q75L30 129 aa6.59□□□□□ -1.35
USP6NL-201ENST00000277575 KRTAP7-1Q8IUC3 87 aa6.59□□□□□ -1.35
USP6NL-201ENST00000277575 S4R3F8 94 aa6.59□□□□□ -1.35
USP6NL-201ENST00000277575 COL7A1Q02388 2944 aa6.58□□□□□ -1.36
USP6NL-201ENST00000277575 KRTAP29-1A8MX34 341 aaPredicted RBP6.57□□□□□ -1.36
USP6NL-201ENST00000277575 FP248Q71RG6 208 aaPredicted RBP6.57□□□□□ -1.36
USP6NL-201ENST00000277575 LCA10Q71F78 164 aa6.55□□□□□ -1.36
USP6NL-201ENST00000277575 KRTAP21-3Q3LHN1 58 aa6.53□□□□□ -1.36
USP6NL-201ENST00000277575 DNAH7Q8WXX0 4024 aa6.53□□□□□ -1.36
USP6NL-201ENST00000277575 NOTCH2NLQ7Z3S9 236 aa6.52□□□□□ -1.37
USP6NL-201ENST00000277575 DMAC1Q96GE9 116 aa6.52□□□□□ -1.37
USP6NL-201ENST00000277575 DNAH3Q8TD57 4116 aa6.52□□□□□ -1.37
USP6NL-201ENST00000277575 Q5XG85 94 aa6.51□□□□□ -1.37
USP6NL-201ENST00000277575 R4GN34 69 aa6.5□□□□□ -1.37
USP6NL-201ENST00000277575 Q5VV11 94 aa6.49□□□□□ -1.37
USP6NL-201ENST00000277575 KRTAP13-1Q8IUC0 172 aa6.48□□□□□ -1.37
USP6NL-201ENST00000277575 ASB16-AS1Q495Z4 193 aa6.48□□□□□ -1.37
USP6NL-201ENST00000277575 KRTAP13-2Q52LG2 175 aa6.46□□□□□ -1.38
USP6NL-201ENST00000277575 OXTP01178 125 aa6.45□□□□□ -1.38
USP6NL-201ENST00000277575 TENM2Q9NT68 2774 aa6.45□□□□□ -1.38
USP6NL-201ENST00000277575 DNHD1Q96M86 4753 aa6.44□□□□□ -1.38
USP6NL-201ENST00000277575 RPS29P62273 56 aaKnown RBP6.44□□□□□ -1.38
USP6NL-201ENST00000277575 RPL37P61927 97 aaKnown RBP6.38□□□□□ -1.39
USP6NL-201ENST00000277575 M0QZ58 72 aa6.37□□□□□ -1.39
USP6NL-201ENST00000277575 LUZP6Q538Z0 58 aa6.35□□□□□ -1.39
USP6NL-201ENST00000277575 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
USP6NL-201ENST00000277575 PRAC1Q96KF2 57 aa6.35□□□□□ -1.39
USP6NL-201ENST00000277575 DNAH10Q8IVF4 4471 aa6.34□□□□□ -1.39
USP6NL-201ENST00000277575 DNAH9Q9NYC9 4486 aa6.33□□□□□ -1.4
USP6NL-201ENST00000277575 TGP01266 2768 aa6.33□□□□□ -1.4
USP6NL-201ENST00000277575 PRKDCP78527 4128 aaKnown RBP6.32□□□□□ -1.4
USP6NL-201ENST00000277575 DNAH1Q9P2D7 4330 aa6.32□□□□□ -1.4
USP6NL-201ENST00000277575 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
USP6NL-201ENST00000277575 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
USP6NL-201ENST00000277575 H3BS24 57 aa6.24□□□□□ -1.41
USP6NL-201ENST00000277575 SRRM2Q9UQ35 2752 aaKnown RBP6.24□□□□□ -1.41
USP6NL-201ENST00000277575 ROMO1P60602 79 aa6.24□□□□□ -1.41
USP6NL-201ENST00000277575 HUWE1Q7Z6Z7 4374 aaKnown RBP6.23□□□□□ -1.41
USP6NL-201ENST00000277575 KRTAP1-4P0C5Y4 121 aa6.2□□□□□ -1.42
USP6NL-201ENST00000277575 A8MUU9 505 aa6.19□□□□□ -1.42
USP6NL-201ENST00000277575 KMT2AQ03164 3969 aa6.19□□□□□ -1.42
USP6NL-201ENST00000277575 PLAC4Q8WY50 150 aa6.18□□□□□ -1.42
USP6NL-201ENST00000277575 MEGF8Q7Z7M0 2845 aa6.18□□□□□ -1.42
USP6NL-201ENST00000277575 FRAS1Q86XX4 4008 aa6.18□□□□□ -1.42
USP6NL-201ENST00000277575 C20orf166-AS1Q96NR2 134 aa6.17□□□□□ -1.42
USP6NL-201ENST00000277575 STARD9Q9P2P6 4700 aa6.16□□□□□ -1.42
USP6NL-201ENST00000277575 FBN3Q75N90 2809 aa6.16□□□□□ -1.42
USP6NL-201ENST00000277575 PLECQ15149 4684 aaKnown RBP6.13□□□□□ -1.43
USP6NL-201ENST00000277575 A8MU10 97 aa6.13□□□□□ -1.43
USP6NL-201ENST00000277575 DNAH2Q9P225 4427 aa6.07□□□□□ -1.44
USP6NL-201ENST00000277575 HYDINQ4G0P3 5121 aa6.06□□□□□ -1.44
USP6NL-201ENST00000277575 XP32Q5T750 250 aa6.06□□□□□ -1.44
USP6NL-201ENST00000277575 DYNC2H1Q8NCM8 4307 aaKnown RBP6.04□□□□□ -1.44
USP6NL-201ENST00000277575 VPS13DQ5THJ4 4388 aa6.03□□□□□ -1.44
USP6NL-201ENST00000277575 DNAH6Q9C0G6 4158 aa6.02□□□□□ -1.45
USP6NL-201ENST00000277575 HECTD4Q9Y4D8 3996 aa6.01□□□□□ -1.45
USP6NL-201ENST00000277575 A6NN06 94 aa5.98□□□□□ -1.45
USP6NL-201ENST00000277575 FAT2Q9NYQ8 4349 aa5.98□□□□□ -1.45
USP6NL-201ENST00000277575 TPRXLQ17RH7 258 aa5.97□□□□□ -1.45
USP6NL-201ENST00000277575 KRTAP16-1A8MUX0 517 aa5.95□□□□□ -1.46
USP6NL-201ENST00000277575 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
USP6NL-201ENST00000277575 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
USP6NL-201ENST00000277575 A0A1B0GVY2 172 aa5.9□□□□□ -1.46
USP6NL-201ENST00000277575 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.46
USP6NL-201ENST00000277575 PKHD1P08F94 4074 aa5.89□□□□□ -1.47
USP6NL-201ENST00000277575 KRTAP10-8P60410 259 aa5.87□□□□□ -1.47
USP6NL-201ENST00000277575 TNP1P09430 55 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms