RNA–Protein interactions for RNA: ENST00000262305.8

RAB11FIP3-201, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAB11FIP3, Length 4,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-201ENST00000262305 ASB16-AS1Q495Z4 193 aa12.69□□□□□ -0.38
RAB11FIP3-201ENST00000262305 LOC400499M0QZD8 3231 aa12.68□□□□□ -0.38
RAB11FIP3-201ENST00000262305 SEC61BP60468 96 aaKnown RBP12.68□□□□□ -0.38
RAB11FIP3-201ENST00000262305 KRTAP13-1Q8IUC0 172 aa12.67□□□□□ -0.38
RAB11FIP3-201ENST00000262305 NOTCH2NLQ7Z3S9 236 aa12.65□□□□□ -0.38
RAB11FIP3-201ENST00000262305 NF1P21359 2839 aa12.62□□□□□ -0.39
RAB11FIP3-201ENST00000262305 CRYBG3Q68DQ2 2970 aa12.62□□□□□ -0.39
RAB11FIP3-201ENST00000262305 CAMK2N1Q7Z7J9 78 aa12.59□□□□□ -0.39
RAB11FIP3-201ENST00000262305 RPS29P62273 56 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP3-201ENST00000262305 FBN2P35556 2912 aa12.57□□□□□ -0.4
RAB11FIP3-201ENST00000262305 M0R2T5 61 aa12.56□□□□□ -0.4
RAB11FIP3-201ENST00000262305 KRTAP21-3Q3LHN1 58 aa12.55□□□□□ -0.4
RAB11FIP3-201ENST00000262305 KRTAP13-2Q52LG2 175 aa12.52□□□□□ -0.41
RAB11FIP3-201ENST00000262305 R4GN34 69 aa12.46□□□□□ -0.41
RAB11FIP3-201ENST00000262305 H1FX-AS1Q4G0G2 97 aa12.37□□□□□ -0.43
RAB11FIP3-201ENST00000262305 RPL37P61927 97 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP3-201ENST00000262305 PRAC1Q96KF2 57 aa12.36□□□□□ -0.43
RAB11FIP3-201ENST00000262305 MXRA5Q9NR99 2828 aa12.32□□□□□ -0.44
RAB11FIP3-201ENST00000262305 MYO15AQ9UKN7 3530 aa12.24□□□□□ -0.45
RAB11FIP3-201ENST00000262305 M0QZ58 72 aa12.23□□□□□ -0.45
RAB11FIP3-201ENST00000262305 LUZP6Q538Z0 58 aa12.22□□□□□ -0.45
RAB11FIP3-201ENST00000262305 ADM2Q7Z4H4 148 aa12.18□□□□□ -0.46
RAB11FIP3-201ENST00000262305 SPATA8Q6RVD6 105 aa12.17□□□□□ -0.46
RAB11FIP3-201ENST00000262305 ROMO1P60602 79 aa12.16□□□□□ -0.46
RAB11FIP3-201ENST00000262305 TENM3Q9P273 2699 aa12.14□□□□□ -0.47
RAB11FIP3-201ENST00000262305 TENM1Q9UKZ4 2725 aa12.08□□□□□ -0.48
RAB11FIP3-201ENST00000262305 CELSR1Q9NYQ6 3014 aa12.08□□□□□ -0.48
RAB11FIP3-201ENST00000262305 RELNP78509 3460 aa12.07□□□□□ -0.48
RAB11FIP3-201ENST00000262305 KRTAP1-4P0C5Y4 121 aa12.05□□□□□ -0.48
RAB11FIP3-201ENST00000262305 A8MUU9 505 aa12.05□□□□□ -0.48
RAB11FIP3-201ENST00000262305 DCHS1Q96JQ0 3298 aa12.05□□□□□ -0.48
RAB11FIP3-201ENST00000262305 C20orf166-AS1Q96NR2 134 aa12.01□□□□□ -0.49
RAB11FIP3-201ENST00000262305 TENM2Q9NT68 2774 aa11.92□□□□□ -0.5
RAB11FIP3-201ENST00000262305 PDZD2O15018 2839 aa11.9□□□□□ -0.5
RAB11FIP3-201ENST00000262305 A8MU10 97 aa11.88□□□□□ -0.51
RAB11FIP3-201ENST00000262305 A6NN06 94 aa11.85□□□□□ -0.51
RAB11FIP3-201ENST00000262305 PLAC4Q8WY50 150 aa11.84□□□□□ -0.51
RAB11FIP3-201ENST00000262305 WDFY3Q8IZQ1 3526 aa11.83□□□□□ -0.52
RAB11FIP3-201ENST00000262305 PKD1L1Q8TDX9 2849 aa11.78□□□□□ -0.52
RAB11FIP3-201ENST00000262305 H3BS24 57 aa11.75□□□□□ -0.53
RAB11FIP3-201ENST00000262305 LAMA5O15230 3695 aa11.73□□□□□ -0.53
RAB11FIP3-201ENST00000262305 XP32Q5T750 250 aa11.72□□□□□ -0.53
RAB11FIP3-201ENST00000262305 TGP01266 2768 aa11.67□□□□□ -0.54
RAB11FIP3-201ENST00000262305 KRTAP16-1A8MUX0 517 aa11.66□□□□□ -0.54
RAB11FIP3-201ENST00000262305 OTOGQ6ZRI0 2925 aa11.63□□□□□ -0.55
RAB11FIP3-201ENST00000262305 MUC3AQ02505 3323 aa11.63□□□□□ -0.55
RAB11FIP3-201ENST00000262305 KRTAP25-1Q3LHN0 102 aa11.62□□□□□ -0.55
RAB11FIP3-201ENST00000262305 FBN1P35555 2871 aaKnown RBP11.59□□□□□ -0.55
RAB11FIP3-201ENST00000262305 ASPMQ8IZT6 3477 aa11.59□□□□□ -0.55
RAB11FIP3-201ENST00000262305 VWFP04275 2813 aa11.58□□□□□ -0.56
RAB11FIP3-201ENST00000262305 ZFHX4Q86UP3 3567 aa11.58□□□□□ -0.56
RAB11FIP3-201ENST00000262305 TPRXLQ17RH7 258 aa11.53□□□□□ -0.56
RAB11FIP3-201ENST00000262305 A0A0A0MQY5 61 aa11.49□□□□□ -0.57
RAB11FIP3-201ENST00000262305 A0A1B0GVY2 172 aa11.45□□□□□ -0.58
RAB11FIP3-201ENST00000262305 DMDP11532 3685 aa11.45□□□□□ -0.58
RAB11FIP3-201ENST00000262305 KRTAP13-3Q3SY46 172 aa11.42□□□□□ -0.58
RAB11FIP3-201ENST00000262305 KRTAP10-8P60410 259 aa11.36□□□□□ -0.59
RAB11FIP3-201ENST00000262305 NBPF19A0A087WUL8 3843 aa11.36□□□□□ -0.59
RAB11FIP3-201ENST00000262305 TNP1P09430 55 aa11.31□□□□□ -0.6
RAB11FIP3-201ENST00000262305 H0YAA0 97 aa11.29□□□□□ -0.6
RAB11FIP3-201ENST00000262305 CSMD1Q96PZ7 3565 aa11.25□□□□□ -0.61
RAB11FIP3-201ENST00000262305 SMG1Q96Q15 3661 aaKnown RBP11.23□□□□□ -0.61
RAB11FIP3-201ENST00000262305 ZFHX3Q15911 3703 aa11.22□□□□□ -0.61
RAB11FIP3-201ENST00000262305 P0C880 135 aa11.1□□□□□ -0.63
RAB11FIP3-201ENST00000262305 ANK3Q12955 4377 aaKnown RBP11.1□□□□□ -0.63
RAB11FIP3-201ENST00000262305 FBN3Q75N90 2809 aa11.06□□□□□ -0.64
RAB11FIP3-201ENST00000262305 PP632Q6XCG6 107 aa11.05□□□□□ -0.64
RAB11FIP3-201ENST00000262305 SRRM2Q9UQ35 2752 aaKnown RBP11.05□□□□□ -0.64
RAB11FIP3-201ENST00000262305 C10orf95Q9H7T3 257 aa11□□□□□ -0.65
RAB11FIP3-201ENST00000262305 SVEP1Q4LDE5 3571 aa10.98□□□□□ -0.65
RAB11FIP3-201ENST00000262305 CSMD2Q7Z408 3487 aa10.97□□□□□ -0.65
RAB11FIP3-201ENST00000262305 NDUFAF8A1L188 74 aa10.97□□□□□ -0.65
RAB11FIP3-201ENST00000262305 KRTAP10-10P60014 251 aa10.92□□□□□ -0.66
RAB11FIP3-201ENST00000262305 SPENQ96T58 3664 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP3-201ENST00000262305 MEGF8Q7Z7M0 2845 aa10.86□□□□□ -0.67
RAB11FIP3-201ENST00000262305 TRRAPQ9Y4A5 3859 aa10.83□□□□□ -0.68
RAB11FIP3-201ENST00000262305 CUBNO60494 3623 aa10.77□□□□□ -0.69
RAB11FIP3-201ENST00000262305 KRTAP3-1Q9BYR8 98 aa10.77□□□□□ -0.69
RAB11FIP3-201ENST00000262305 COL7A1Q02388 2944 aa10.71□□□□□ -0.69
RAB11FIP3-201ENST00000262305 BSNQ9UPA5 3926 aa10.68□□□□□ -0.7
RAB11FIP3-201ENST00000262305 PRO2289Q9P1D8 64 aa10.65□□□□□ -0.7
RAB11FIP3-201ENST00000262305 KRTAP12-2P59991 146 aa10.6□□□□□ -0.71
RAB11FIP3-201ENST00000262305 MT1HL1P0DM35 61 aa10.51□□□□□ -0.73
RAB11FIP3-201ENST00000262305 KRTAP12-1P59990 96 aa10.51□□□□□ -0.73
RAB11FIP3-201ENST00000262305 KRTAP10-4P60372 401 aaPredicted RBP10.42□□□□□ -0.74
RAB11FIP3-201ENST00000262305 KRTAP10-6P60371 365 aaPredicted RBP10.4□□□□□ -0.74
RAB11FIP3-201ENST00000262305 KRTAP13-4Q3LI77 160 aa10.38□□□□□ -0.75
RAB11FIP3-201ENST00000262305 HUWE1Q7Z6Z7 4374 aaKnown RBP10.36□□□□□ -0.75
RAB11FIP3-201ENST00000262305 VPS13CQ709C8 3753 aa10.16□□□□□ -0.78
RAB11FIP3-201ENST00000262305 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
RAB11FIP3-201ENST00000262305 KRTAP4-5Q9BYR2 181 aa10.11□□□□□ -0.79
RAB11FIP3-201ENST00000262305 KRTAP3-2Q9BYR7 98 aa10.09□□□□□ -0.79
RAB11FIP3-201ENST00000262305 DNAH9Q9NYC9 4486 aa9.95□□□□□ -0.82
RAB11FIP3-201ENST00000262305 ZNF469Q96JG9 3925 aaPredicted RBP9.95□□□□□ -0.82
RAB11FIP3-201ENST00000262305 ALMS1Q8TCU4 4167 aa9.85□□□□□ -0.83
RAB11FIP3-201ENST00000262305 DNAH5Q8TE73 4624 aa9.8□□□□□ -0.84
RAB11FIP3-201ENST00000262305 AKAP9Q99996 3911 aa9.77□□□□□ -0.85
RAB11FIP3-201ENST00000262305 KRTAP15-1Q3LI76 137 aa9.72□□□□□ -0.85
RAB11FIP3-201ENST00000262305 CSMD3Q7Z407 3707 aa9.7□□□□□ -0.86
RAB11FIP3-201ENST00000262305 PLECQ15149 4684 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms