RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 DNAH2Q9P225 4427 aa11.51□□□□□ -0.57
SCARB1-201ENST00000261693 MRPL34Q9BQ48 92 aaKnown RBP11.51□□□□□ -0.57
SCARB1-201ENST00000261693 SPINK6Q6UWN8 80 aa11.5□□□□□ -0.57
SCARB1-201ENST00000261693 FBN3Q75N90 2809 aa11.5□□□□□ -0.57
SCARB1-201ENST00000261693 ZNF861PO60384 105 aa11.5□□□□□ -0.57
SCARB1-201ENST00000261693 PRKDCP78527 4128 aaKnown RBP11.48□□□□□ -0.57
SCARB1-201ENST00000261693 MEGF8Q7Z7M0 2845 aa11.48□□□□□ -0.57
SCARB1-201ENST00000261693 DNAH17Q9UFH2 4485 aa11.47□□□□□ -0.57
SCARB1-201ENST00000261693 SPAG11AQ6PDA7 123 aa11.47□□□□□ -0.57
SCARB1-201ENST00000261693 PMAIP1Q13794 54 aa11.45□□□□□ -0.58
SCARB1-201ENST00000261693 PLAC8Q9NZF1 115 aa11.45□□□□□ -0.58
SCARB1-201ENST00000261693 A6NED7 52 aa11.42□□□□□ -0.58
SCARB1-201ENST00000261693 CIRBP-AS1Q8TBR5 109 aa11.42□□□□□ -0.58
SCARB1-201ENST00000261693 HRES1P13985 223 aa11.41□□□□□ -0.58
SCARB1-201ENST00000261693 Q75L30 129 aa11.41□□□□□ -0.58
SCARB1-201ENST00000261693 LOC101927531A0A1B0GV80 90 aa11.4□□□□□ -0.58
SCARB1-201ENST00000261693 Q5W150 140 aa11.4□□□□□ -0.58
SCARB1-201ENST00000261693 LCA10Q71F78 164 aa11.39□□□□□ -0.59
SCARB1-201ENST00000261693 SPTSSBQ8NFR3 76 aa11.39□□□□□ -0.59
SCARB1-201ENST00000261693 DNAH6Q9C0G6 4158 aa11.37□□□□□ -0.59
SCARB1-201ENST00000261693 IGLV7-43P04211 117 aa11.35□□□□□ -0.59
SCARB1-201ENST00000261693 ALMS1Q8TCU4 4167 aa11.34□□□□□ -0.59
SCARB1-201ENST00000261693 LINC01558Q9Y6Z2 57 aa11.33□□□□□ -0.6
SCARB1-201ENST00000261693 KRTAP13-3Q3SY46 172 aa11.29□□□□□ -0.6
SCARB1-201ENST00000261693 SEC61GP60059 68 aa11.28□□□□□ -0.6
SCARB1-201ENST00000261693 PRR26Q8N8Z3 221 aa11.28□□□□□ -0.6
SCARB1-201ENST00000261693 C1orf134Q5TEV5 83 aa11.28□□□□□ -0.6
SCARB1-201ENST00000261693 DNAH11Q96DT5 4516 aa11.26□□□□□ -0.61
SCARB1-201ENST00000261693 RETNLBQ9BQ08 111 aa11.25□□□□□ -0.61
SCARB1-201ENST00000261693 SPINK7P58062 85 aa11.24□□□□□ -0.61
SCARB1-201ENST00000261693 ATP11AUNQ6ZP68 121 aa11.24□□□□□ -0.61
SCARB1-201ENST00000261693 CDC42SE1Q9NRR8 79 aa11.23□□□□□ -0.61
SCARB1-201ENST00000261693 DNAH5Q8TE73 4624 aa11.21□□□□□ -0.61
SCARB1-201ENST00000261693 LY6G6CO95867 125 aa11.2□□□□□ -0.62
SCARB1-201ENST00000261693 SSBP3-AS1Q7Z2R9 100 aa11.19□□□□□ -0.62
SCARB1-201ENST00000261693 LINC00313P59037 77 aa11.18□□□□□ -0.62
SCARB1-201ENST00000261693 C8orf87E5RJ46 101 aa11.17□□□□□ -0.62
SCARB1-201ENST00000261693 KRTAP10-2P60368 255 aa11.17□□□□□ -0.62
SCARB1-201ENST00000261693 ACYP2P14621 99 aa11.15□□□□□ -0.62
SCARB1-201ENST00000261693 A6NN06 94 aa11.13□□□□□ -0.63
SCARB1-201ENST00000261693 KRTAP13-2Q52LG2 175 aa11.13□□□□□ -0.63
SCARB1-201ENST00000261693 KTN1-AS1Q86SY8 53 aa11.13□□□□□ -0.63
SCARB1-201ENST00000261693 LRP1BQ9NZR2 4599 aa11.1□□□□□ -0.63
SCARB1-201ENST00000261693 FAM229AH3BQW9 127 aa11.09□□□□□ -0.63
SCARB1-201ENST00000261693 DMAC1Q96GE9 116 aa11.08□□□□□ -0.64
SCARB1-201ENST00000261693 DNHD1Q96M86 4753 aa11.04□□□□□ -0.64
SCARB1-201ENST00000261693 IGKV2-30P06310 120 aa11.04□□□□□ -0.64
SCARB1-201ENST00000261693 VPS13BQ7Z7G8 4022 aa11.01□□□□□ -0.65
SCARB1-201ENST00000261693 KRTAP10-1P60331 282 aa11.01□□□□□ -0.65
SCARB1-201ENST00000261693 PKD1P98161 4303 aa11□□□□□ -0.65
SCARB1-201ENST00000261693 KRTAP16-1A8MUX0 517 aa11□□□□□ -0.65
SCARB1-201ENST00000261693 HYDINQ4G0P3 5121 aa10.99□□□□□ -0.65
SCARB1-201ENST00000261693 IGKV2D-30A0A075B6S6 120 aa10.98□□□□□ -0.65
SCARB1-201ENST00000261693 A0A1B0GU69 56 aa10.95□□□□□ -0.66
SCARB1-201ENST00000261693 KRTAP1-4P0C5Y4 121 aa10.94□□□□□ -0.66
SCARB1-201ENST00000261693 RBM12B-AS1Q9P1G2 102 aa10.94□□□□□ -0.66
SCARB1-201ENST00000261693 Q6ZSA8 131 aa10.92□□□□□ -0.66
SCARB1-201ENST00000261693 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
SCARB1-201ENST00000261693 FAT2Q9NYQ8 4349 aa10.91□□□□□ -0.66
SCARB1-201ENST00000261693 PLA2G1BP04054 148 aaKnown RBP10.87□□□□□ -0.67
SCARB1-201ENST00000261693 C4orf48Q5BLP8 95 aa10.86□□□□□ -0.67
SCARB1-201ENST00000261693 TYMSOSQ8TAI1 123 aa10.83□□□□□ -0.68
SCARB1-201ENST00000261693 PKHD1P08F94 4074 aa10.76□□□□□ -0.69
SCARB1-201ENST00000261693 SPINK1P00995 79 aa10.76□□□□□ -0.69
SCARB1-201ENST00000261693 SPATA8Q6RVD6 105 aa10.76□□□□□ -0.69
SCARB1-201ENST00000261693 Q8N1X5 172 aa10.75□□□□□ -0.69
SCARB1-201ENST00000261693 MIR22HGQ0VDD5 57 aa10.75□□□□□ -0.69
SCARB1-201ENST00000261693 PRAC1Q96KF2 57 aa10.74□□□□□ -0.69
SCARB1-201ENST00000261693 UQCR11O14957 56 aa10.74□□□□□ -0.69
SCARB1-201ENST00000261693 ADM2Q7Z4H4 148 aa10.72□□□□□ -0.69
SCARB1-201ENST00000261693 LINC00304Q8N9R0 145 aa10.66□□□□□ -0.7
SCARB1-201ENST00000261693 C9orf92A6NGG3 77 aa10.6□□□□□ -0.71
SCARB1-201ENST00000261693 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
SCARB1-201ENST00000261693 FAT1Q14517 4588 aa10.51□□□□□ -0.73
SCARB1-201ENST00000261693 RPS29P62273 56 aaKnown RBP10.5□□□□□ -0.73
SCARB1-201ENST00000261693 SACSQ9NZJ4 4579 aa10.49□□□□□ -0.73
SCARB1-201ENST00000261693 DYNC1H1Q14204 4646 aaKnown RBP10.48□□□□□ -0.73
SCARB1-201ENST00000261693 KRTAP3-1Q9BYR8 98 aa10.44□□□□□ -0.74
SCARB1-201ENST00000261693 A8MUU9 505 aa10.43□□□□□ -0.74
SCARB1-201ENST00000261693 C20orf166-AS1Q96NR2 134 aa10.43□□□□□ -0.74
SCARB1-201ENST00000261693 PKHD1L1Q86WI1 4243 aa10.4□□□□□ -0.74
SCARB1-201ENST00000261693 H0YAA0 97 aa10.39□□□□□ -0.75
SCARB1-201ENST00000261693 CSAG1Q6PB30 78 aa10.37□□□□□ -0.75
SCARB1-201ENST00000261693 APOBP04114 4563 aaKnown RBP10.36□□□□□ -0.75
SCARB1-201ENST00000261693 LINC01554Q52M75 96 aa10.35□□□□□ -0.75
SCARB1-201ENST00000261693 A0A1B0GU33 70 aa10.31□□□□□ -0.76
SCARB1-201ENST00000261693 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
SCARB1-201ENST00000261693 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
SCARB1-201ENST00000261693 H1FX-AS1Q4G0G2 97 aa10.25□□□□□ -0.77
SCARB1-201ENST00000261693 A0A1B0GVY2 172 aa10.21□□□□□ -0.78
SCARB1-201ENST00000261693 COX6B2Q6YFQ2 88 aa10.18□□□□□ -0.78
SCARB1-201ENST00000261693 LRP1Q07954 4544 aaKnown RBP10.15□□□□□ -0.78
SCARB1-201ENST00000261693 DMBT1Q9UGM3 2413 aaPredicted RBP10.15□□□□□ -0.78
SCARB1-201ENST00000261693 FAT3Q8TDW7 4589 aa10.1□□□□□ -0.79
SCARB1-201ENST00000261693 HSPG2P98160 4391 aa10.08□□□□□ -0.8
SCARB1-201ENST00000261693 RYR2Q92736 4967 aa10.07□□□□□ -0.8
SCARB1-201ENST00000261693 TNXBP22105 4242 aa10.05□□□□□ -0.8
SCARB1-201ENST00000261693 KMT2CQ8NEZ4 4911 aaKnown RBP10.04□□□□□ -0.8
SCARB1-201ENST00000261693 MYCBP2O75592 4640 aa10.03□□□□□ -0.8
SCARB1-201ENST00000261693 KRTAP25-1Q3LHN0 102 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms