RNA–Protein interactions for RNA: ENST00000257879.10

ITGA7-201, Transcript of integrin subunit alpha 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGA7, Length 4,120 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-201ENST00000257879 PLA2G1BP04054 148 aaKnown RBP10.6□□□□□ -0.71
ITGA7-201ENST00000257879 DMAC1Q96GE9 116 aa10.57□□□□□ -0.72
ITGA7-201ENST00000257879 A8MU10 97 aa10.56□□□□□ -0.72
ITGA7-201ENST00000257879 VWFP04275 2813 aa10.55□□□□□ -0.72
ITGA7-201ENST00000257879 NBPF19A0A087WUL8 3843 aa10.54□□□□□ -0.72
ITGA7-201ENST00000257879 A0A087X002 238 aa10.53□□□□□ -0.72
ITGA7-201ENST00000257879 NOTCH2NLQ7Z3S9 236 aa10.53□□□□□ -0.72
ITGA7-201ENST00000257879 A6NN06 94 aa10.53□□□□□ -0.72
ITGA7-201ENST00000257879 TENM1Q9UKZ4 2725 aa10.53□□□□□ -0.72
ITGA7-201ENST00000257879 STAB2Q8WWQ8 2551 aa10.53□□□□□ -0.72
ITGA7-201ENST00000257879 TENM3Q9P273 2699 aa10.52□□□□□ -0.73
ITGA7-201ENST00000257879 Q6ZRN7 208 aaPredicted RBP10.51□□□□□ -0.73
ITGA7-201ENST00000257879 OTOGQ6ZRI0 2925 aa10.5□□□□□ -0.73
ITGA7-201ENST00000257879 PDZD2O15018 2839 aa10.48□□□□□ -0.73
ITGA7-201ENST00000257879 ZFHX3Q15911 3703 aa10.47□□□□□ -0.73
ITGA7-201ENST00000257879 ASB16-AS1Q495Z4 193 aa10.47□□□□□ -0.73
ITGA7-201ENST00000257879 LINC00304Q8N9R0 145 aa10.46□□□□□ -0.73
ITGA7-201ENST00000257879 Q8N1X5 172 aa10.43□□□□□ -0.74
ITGA7-201ENST00000257879 PRAC1Q96KF2 57 aa10.43□□□□□ -0.74
ITGA7-201ENST00000257879 LINC01554Q52M75 96 aa10.39□□□□□ -0.75
ITGA7-201ENST00000257879 SPATA8Q6RVD6 105 aa10.36□□□□□ -0.75
ITGA7-201ENST00000257879 FBN1P35555 2871 aaKnown RBP10.34□□□□□ -0.75
ITGA7-201ENST00000257879 C9orf92A6NGG3 77 aa10.27□□□□□ -0.76
ITGA7-201ENST00000257879 A0A1B0GU33 70 aa10.26□□□□□ -0.77
ITGA7-201ENST00000257879 CSAG1Q6PB30 78 aa10.2□□□□□ -0.78
ITGA7-201ENST00000257879 KRTAP10-2P60368 255 aa10.19□□□□□ -0.78
ITGA7-201ENST00000257879 PKD1L1Q8TDX9 2849 aa10.19□□□□□ -0.78
ITGA7-201ENST00000257879 ZNF469Q96JG9 3925 aaPredicted RBP10.18□□□□□ -0.78
ITGA7-201ENST00000257879 ANK3Q12955 4377 aaKnown RBP10.17□□□□□ -0.78
ITGA7-201ENST00000257879 KRTAP10-1P60331 282 aa10.15□□□□□ -0.78
ITGA7-201ENST00000257879 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
ITGA7-201ENST00000257879 SMR3BP02814 79 aaPredicted RBP10.12□□□□□ -0.79
ITGA7-201ENST00000257879 TRRAPQ9Y4A5 3859 aa10.09□□□□□ -0.79
ITGA7-201ENST00000257879 ADM2Q7Z4H4 148 aa10.06□□□□□ -0.8
ITGA7-201ENST00000257879 KRTAP13-3Q3SY46 172 aa10.05□□□□□ -0.8
ITGA7-201ENST00000257879 SPINT4Q6UDR6 99 aa10.01□□□□□ -0.81
ITGA7-201ENST00000257879 RPS29P62273 56 aaKnown RBP10□□□□□ -0.81
ITGA7-201ENST00000257879 H1FX-AS1Q4G0G2 97 aa10□□□□□ -0.81
ITGA7-201ENST00000257879 CRIPTQ9P021 101 aa9.95□□□□□ -0.82
ITGA7-201ENST00000257879 DMBT1Q9UGM3 2413 aaPredicted RBP9.93□□□□□ -0.82
ITGA7-201ENST00000257879 TENM2Q9NT68 2774 aa9.93□□□□□ -0.82
ITGA7-201ENST00000257879 A0A0D9SG42 100 aa9.92□□□□□ -0.82
ITGA7-201ENST00000257879 KRTAP16-1A8MUX0 517 aa9.91□□□□□ -0.82
ITGA7-201ENST00000257879 H3BS24 57 aa9.89□□□□□ -0.83
ITGA7-201ENST00000257879 COX6B2Q6YFQ2 88 aa9.89□□□□□ -0.83
ITGA7-201ENST00000257879 Q6ZSA8 131 aa9.86□□□□□ -0.83
ITGA7-201ENST00000257879 KRTAP1-4P0C5Y4 121 aa9.85□□□□□ -0.83
ITGA7-201ENST00000257879 RPL37P61927 97 aaKnown RBP9.83□□□□□ -0.84
ITGA7-201ENST00000257879 SRRM2Q9UQ35 2752 aaKnown RBP9.83□□□□□ -0.84
ITGA7-201ENST00000257879 AKAP9Q99996 3911 aa9.83□□□□□ -0.84
ITGA7-201ENST00000257879 KRTAP25-1Q3LHN0 102 aa9.82□□□□□ -0.84
ITGA7-201ENST00000257879 ROMO1P60602 79 aa9.8□□□□□ -0.84
ITGA7-201ENST00000257879 TGP01266 2768 aa9.78□□□□□ -0.84
ITGA7-201ENST00000257879 A8MUU9 505 aa9.77□□□□□ -0.85
ITGA7-201ENST00000257879 C20orf166-AS1Q96NR2 134 aa9.75□□□□□ -0.85
ITGA7-201ENST00000257879 S4R3F8 94 aa9.74□□□□□ -0.85
ITGA7-201ENST00000257879 FLG2Q5D862 2391 aaPredicted RBP9.71□□□□□ -0.86
ITGA7-201ENST00000257879 H0YAA0 97 aa9.66□□□□□ -0.86
ITGA7-201ENST00000257879 FBN3Q75N90 2809 aa9.49□□□□□ -0.89
ITGA7-201ENST00000257879 HUWE1Q7Z6Z7 4374 aaKnown RBP9.42□□□□□ -0.9
ITGA7-201ENST00000257879 Q5VSD8 79 aa9.4□□□□□ -0.9
ITGA7-201ENST00000257879 MEGF8Q7Z7M0 2845 aa9.4□□□□□ -0.9
ITGA7-201ENST00000257879 CSMD3Q7Z407 3707 aa9.37□□□□□ -0.91
ITGA7-201ENST00000257879 COL7A1Q02388 2944 aa9.33□□□□□ -0.92
ITGA7-201ENST00000257879 R4GN34 69 aa9.33□□□□□ -0.92
ITGA7-201ENST00000257879 M0QZ58 72 aa9.32□□□□□ -0.92
ITGA7-201ENST00000257879 KRTAP3-1Q9BYR8 98 aa9.29□□□□□ -0.92
ITGA7-201ENST00000257879 LUZP6Q538Z0 58 aa9.21□□□□□ -0.93
ITGA7-201ENST00000257879 XP32Q5T750 250 aa9.18□□□□□ -0.94
ITGA7-201ENST00000257879 CAMK2N1Q7Z7J9 78 aa9.18□□□□□ -0.94
ITGA7-201ENST00000257879 J3QL48 77 aa9.16□□□□□ -0.94
ITGA7-201ENST00000257879 SEC61BP60468 96 aaKnown RBP9.15□□□□□ -0.95
ITGA7-201ENST00000257879 NDUFAF8A1L188 74 aa9.13□□□□□ -0.95
ITGA7-201ENST00000257879 C10orf95Q9H7T3 257 aa9.12□□□□□ -0.95
ITGA7-201ENST00000257879 P0C880 135 aa9.1□□□□□ -0.95
ITGA7-201ENST00000257879 KRTAP21-3Q3LHN1 58 aa9.08□□□□□ -0.96
ITGA7-201ENST00000257879 DNAH10Q8IVF4 4471 aa9.07□□□□□ -0.96
ITGA7-201ENST00000257879 DNAH9Q9NYC9 4486 aa9.05□□□□□ -0.96
ITGA7-201ENST00000257879 A0A1B0GVY2 172 aa9.02□□□□□ -0.97
ITGA7-201ENST00000257879 KRTAP10-8P60410 259 aa9.01□□□□□ -0.97
ITGA7-201ENST00000257879 KRTAP10-6P60371 365 aaPredicted RBP8.99□□□□□ -0.97
ITGA7-201ENST00000257879 PLECQ15149 4684 aaKnown RBP8.95□□□□□ -0.98
ITGA7-201ENST00000257879 DNAH1Q9P2D7 4330 aa8.94□□□□□ -0.98
ITGA7-201ENST00000257879 ANK2Q01484 3957 aa8.93□□□□□ -0.98
ITGA7-201ENST00000257879 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
ITGA7-201ENST00000257879 KRTAP13-4Q3LI77 160 aa8.9□□□□□ -0.98
ITGA7-201ENST00000257879 A0A0A0MQY5 61 aa8.9□□□□□ -0.99
ITGA7-201ENST00000257879 KRTAP12-2P59991 146 aa8.88□□□□□ -0.99
ITGA7-201ENST00000257879 VPS13DQ5THJ4 4388 aa8.86□□□□□ -0.99
ITGA7-201ENST00000257879 DNAH17Q9UFH2 4485 aa8.85□□□□□ -0.99
ITGA7-201ENST00000257879 KRTAP12-1P59990 96 aa8.83□□□□□ -1
ITGA7-201ENST00000257879 KRTAP3-3Q9BYR6 98 aa8.81□□□□□ -1
ITGA7-201ENST00000257879 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
ITGA7-201ENST00000257879 DNAH8Q96JB1 4490 aa8.79□□□□□ -1
ITGA7-201ENST00000257879 DNAH3Q8TD57 4116 aa8.78□□□□□ -1
ITGA7-201ENST00000257879 KRTAP10-4P60372 401 aaPredicted RBP8.77□□□□□ -1.01
ITGA7-201ENST00000257879 PLAC4Q8WY50 150 aa8.76□□□□□ -1.01
ITGA7-201ENST00000257879 PP632Q6XCG6 107 aa8.75□□□□□ -1.01
ITGA7-201ENST00000257879 ALMS1Q8TCU4 4167 aa8.74□□□□□ -1.01
ITGA7-201ENST00000257879 DNAH11Q96DT5 4516 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms