RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 WWC2-AS2Q96NR7 200 aa10.05□□□□□ -0.8
SGPP1-201ENST00000247225 MEGF8Q7Z7M0 2845 aa10.05□□□□□ -0.8
SGPP1-201ENST00000247225 KRTAP13-1Q8IUC0 172 aa10.04□□□□□ -0.8
SGPP1-201ENST00000247225 IGLV5-52A0A0A0MRZ9 124 aa10.03□□□□□ -0.8
SGPP1-201ENST00000247225 ZNF706Q9Y5V0 76 aaPredicted RBP10.01□□□□□ -0.81
SGPP1-201ENST00000247225 ZNF861PO60384 105 aa10.01□□□□□ -0.81
SGPP1-201ENST00000247225 Q75L30 129 aa10□□□□□ -0.81
SGPP1-201ENST00000247225 Q6ZRN7 208 aaPredicted RBP10□□□□□ -0.81
SGPP1-201ENST00000247225 LY6G6CO95867 125 aa9.99□□□□□ -0.81
SGPP1-201ENST00000247225 DNAH3Q8TD57 4116 aa9.97□□□□□ -0.81
SGPP1-201ENST00000247225 NUPR2A6NF83 97 aa9.96□□□□□ -0.81
SGPP1-201ENST00000247225 ATP11AUNQ6ZP68 121 aa9.96□□□□□ -0.81
SGPP1-201ENST00000247225 IGKV2D-30A0A075B6S6 120 aa9.95□□□□□ -0.82
SGPP1-201ENST00000247225 IGKV2-30P06310 120 aa9.95□□□□□ -0.82
SGPP1-201ENST00000247225 Q6ZR54 194 aa9.94□□□□□ -0.82
SGPP1-201ENST00000247225 KTN1-AS1Q86SY8 53 aa9.94□□□□□ -0.82
SGPP1-201ENST00000247225 SPINK1P00995 79 aa9.93□□□□□ -0.82
SGPP1-201ENST00000247225 CDC42SE1Q9NRR8 79 aa9.93□□□□□ -0.82
SGPP1-201ENST00000247225 LINC01558Q9Y6Z2 57 aa9.92□□□□□ -0.82
SGPP1-201ENST00000247225 RBM12B-AS1Q9P1G2 102 aa9.92□□□□□ -0.82
SGPP1-201ENST00000247225 KMT2AQ03164 3969 aa9.9□□□□□ -0.82
SGPP1-201ENST00000247225 PRAC1Q96KF2 57 aa9.9□□□□□ -0.83
SGPP1-201ENST00000247225 IGLV7-43P04211 117 aa9.87□□□□□ -0.83
SGPP1-201ENST00000247225 LINC00313P59037 77 aa9.87□□□□□ -0.83
SGPP1-201ENST00000247225 LINC00483Q53H64 154 aa9.87□□□□□ -0.83
SGPP1-201ENST00000247225 ACYP2P14621 99 aa9.87□□□□□ -0.83
SGPP1-201ENST00000247225 STARD9Q9P2P6 4700 aa9.86□□□□□ -0.83
SGPP1-201ENST00000247225 C1orf134Q5TEV5 83 aa9.86□□□□□ -0.83
SGPP1-201ENST00000247225 DNAH8Q96JB1 4490 aa9.85□□□□□ -0.83
SGPP1-201ENST00000247225 ASB16-AS1Q495Z4 193 aa9.84□□□□□ -0.83
SGPP1-201ENST00000247225 A0A1B0GU69 56 aa9.83□□□□□ -0.84
SGPP1-201ENST00000247225 A6NN06 94 aa9.82□□□□□ -0.84
SGPP1-201ENST00000247225 ADM2Q7Z4H4 148 aa9.81□□□□□ -0.84
SGPP1-201ENST00000247225 PLAC8Q9NZF1 115 aa9.8□□□□□ -0.84
SGPP1-201ENST00000247225 KRTAP10-2P60368 255 aa9.77□□□□□ -0.84
SGPP1-201ENST00000247225 C7orf65Q6ZTY9 151 aa9.76□□□□□ -0.85
SGPP1-201ENST00000247225 FLG2Q5D862 2391 aaPredicted RBP9.75□□□□□ -0.85
SGPP1-201ENST00000247225 DNAH17Q9UFH2 4485 aa9.75□□□□□ -0.85
SGPP1-201ENST00000247225 Q8N1X5 172 aa9.73□□□□□ -0.85
SGPP1-201ENST00000247225 PRKDCP78527 4128 aaKnown RBP9.73□□□□□ -0.85
SGPP1-201ENST00000247225 DMBT1Q9UGM3 2413 aaPredicted RBP9.72□□□□□ -0.85
SGPP1-201ENST00000247225 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.86
SGPP1-201ENST00000247225 FAM229AH3BQW9 127 aa9.71□□□□□ -0.86
SGPP1-201ENST00000247225 DNAH11Q96DT5 4516 aa9.7□□□□□ -0.86
SGPP1-201ENST00000247225 HECTD4Q9Y4D8 3996 aa9.7□□□□□ -0.86
SGPP1-201ENST00000247225 DNAH6Q9C0G6 4158 aa9.68□□□□□ -0.86
SGPP1-201ENST00000247225 DNAH2Q9P225 4427 aa9.68□□□□□ -0.86
SGPP1-201ENST00000247225 SSBP3-AS1Q7Z2R9 100 aa9.67□□□□□ -0.86
SGPP1-201ENST00000247225 KRTAP13-2Q52LG2 175 aa9.66□□□□□ -0.86
SGPP1-201ENST00000247225 VPS13DQ5THJ4 4388 aa9.66□□□□□ -0.86
SGPP1-201ENST00000247225 C8orf87E5RJ46 101 aa9.65□□□□□ -0.86
SGPP1-201ENST00000247225 KRTAP13-3Q3SY46 172 aa9.64□□□□□ -0.87
SGPP1-201ENST00000247225 PLA2G1BP04054 148 aaKnown RBP9.63□□□□□ -0.87
SGPP1-201ENST00000247225 MIR22HGQ0VDD5 57 aa9.63□□□□□ -0.87
SGPP1-201ENST00000247225 DMAC1Q96GE9 116 aa9.63□□□□□ -0.87
SGPP1-201ENST00000247225 KRTAP10-1P60331 282 aa9.6□□□□□ -0.87
SGPP1-201ENST00000247225 C9orf92A6NGG3 77 aa9.57□□□□□ -0.88
SGPP1-201ENST00000247225 TYMSOSQ8TAI1 123 aa9.57□□□□□ -0.88
SGPP1-201ENST00000247225 UQCR11O14957 56 aa9.57□□□□□ -0.88
SGPP1-201ENST00000247225 SMR3BP02814 79 aaPredicted RBP9.57□□□□□ -0.88
SGPP1-201ENST00000247225 LRP1BQ9NZR2 4599 aa9.56□□□□□ -0.88
SGPP1-201ENST00000247225 DNHD1Q96M86 4753 aa9.47□□□□□ -0.89
SGPP1-201ENST00000247225 DYNC2H1Q8NCM8 4307 aaKnown RBP9.46□□□□□ -0.9
SGPP1-201ENST00000247225 CSAG1Q6PB30 78 aa9.44□□□□□ -0.9
SGPP1-201ENST00000247225 ALMS1Q8TCU4 4167 aa9.44□□□□□ -0.9
SGPP1-201ENST00000247225 KRTAP16-1A8MUX0 517 aa9.43□□□□□ -0.9
SGPP1-201ENST00000247225 SPATA8Q6RVD6 105 aa9.42□□□□□ -0.9
SGPP1-201ENST00000247225 DNAH5Q8TE73 4624 aa9.4□□□□□ -0.9
SGPP1-201ENST00000247225 CRIPTQ9P021 101 aa9.4□□□□□ -0.9
SGPP1-201ENST00000247225 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
SGPP1-201ENST00000247225 VPS13BQ7Z7G8 4022 aa9.36□□□□□ -0.91
SGPP1-201ENST00000247225 LINC01554Q52M75 96 aa9.34□□□□□ -0.91
SGPP1-201ENST00000247225 LINC00304Q8N9R0 145 aa9.34□□□□□ -0.91
SGPP1-201ENST00000247225 HYDINQ4G0P3 5121 aa9.32□□□□□ -0.92
SGPP1-201ENST00000247225 FAT2Q9NYQ8 4349 aa9.25□□□□□ -0.93
SGPP1-201ENST00000247225 FAT1Q14517 4588 aa9.24□□□□□ -0.93
SGPP1-201ENST00000247225 Q6ZSA8 131 aa9.22□□□□□ -0.93
SGPP1-201ENST00000247225 A0A1B0GU33 70 aa9.2□□□□□ -0.94
SGPP1-201ENST00000247225 PKHD1P08F94 4074 aa9.19□□□□□ -0.94
SGPP1-201ENST00000247225 H0YAA0 97 aa9.17□□□□□ -0.94
SGPP1-201ENST00000247225 A0A0D9SG42 100 aa9.14□□□□□ -0.95
SGPP1-201ENST00000247225 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
SGPP1-201ENST00000247225 H3BS24 57 aa9.04□□□□□ -0.96
SGPP1-201ENST00000247225 H1FX-AS1Q4G0G2 97 aa9.04□□□□□ -0.96
SGPP1-201ENST00000247225 MYCBP2O75592 4640 aa9.04□□□□□ -0.96
SGPP1-201ENST00000247225 PKD1P98161 4303 aa9.02□□□□□ -0.97
SGPP1-201ENST00000247225 K7ERS5 55 aa9.02□□□□□ -0.97
SGPP1-201ENST00000247225 A8MUU9 505 aa8.98□□□□□ -0.97
SGPP1-201ENST00000247225 DYNC1H1Q14204 4646 aaKnown RBP8.95□□□□□ -0.98
SGPP1-201ENST00000247225 COX6B2Q6YFQ2 88 aa8.95□□□□□ -0.98
SGPP1-201ENST00000247225 KRTAP25-1Q3LHN0 102 aa8.92□□□□□ -0.98
SGPP1-201ENST00000247225 C20orf166-AS1Q96NR2 134 aa8.91□□□□□ -0.98
SGPP1-201ENST00000247225 LRP1Q07954 4544 aaKnown RBP8.87□□□□□ -0.99
SGPP1-201ENST00000247225 SACSQ9NZJ4 4579 aa8.83□□□□□ -1
SGPP1-201ENST00000247225 C10orf95Q9H7T3 257 aa8.79□□□□□ -1
SGPP1-201ENST00000247225 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
SGPP1-201ENST00000247225 RPS29P62273 56 aaKnown RBP8.76□□□□□ -1.01
SGPP1-201ENST00000247225 ROMO1P60602 79 aa8.75□□□□□ -1.01
SGPP1-201ENST00000247225 KRTAP13-4Q3LI77 160 aa8.75□□□□□ -1.01
SGPP1-201ENST00000247225 APOBP04114 4563 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms