RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 HTTP42858 3142 aa5.2□□□□□ -1.58
LRP1-201ENST00000243077 CFAP47Q6ZTR5 3102 aa5.2□□□□□ -1.58
LRP1-201ENST00000243077 KRTAP10-1P60331 282 aa5.2□□□□□ -1.58
LRP1-201ENST00000243077 TENM1Q9UKZ4 2725 aa5.19□□□□□ -1.58
LRP1-201ENST00000243077 ATMQ13315 3056 aa5.19□□□□□ -1.58
LRP1-201ENST00000243077 TNRC18O15417 2968 aaPredicted RBP5.18□□□□□ -1.58
LRP1-201ENST00000243077 KRTAP1-5Q9BYS1 174 aa5.18□□□□□ -1.58
LRP1-201ENST00000243077 DMXL1Q9Y485 3027 aa5.18□□□□□ -1.58
LRP1-201ENST00000243077 Q5VSD8 79 aa5.18□□□□□ -1.58
LRP1-201ENST00000243077 LAMA3Q16787 3333 aa5.16□□□□□ -1.58
LRP1-201ENST00000243077 NOTCH2NLQ7Z3S9 236 aa5.15□□□□□ -1.58
LRP1-201ENST00000243077 A8MUU9 505 aa5.13□□□□□ -1.59
LRP1-201ENST00000243077 KRTAP13-1Q8IUC0 172 aa5.13□□□□□ -1.59
LRP1-201ENST00000243077 TNP1P09430 55 aa5.11□□□□□ -1.59
LRP1-201ENST00000243077 KRTAP10-2P60368 255 aa5.09□□□□□ -1.59
LRP1-201ENST00000243077 CELSR1Q9NYQ6 3014 aa5.09□□□□□ -1.6
LRP1-201ENST00000243077 C20orf166-AS1Q96NR2 134 aa5.08□□□□□ -1.6
LRP1-201ENST00000243077 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
LRP1-201ENST00000243077 Q6ZRN7 208 aaPredicted RBP5.08□□□□□ -1.6
LRP1-201ENST00000243077 ZANQ9Y493 2812 aa5.06□□□□□ -1.6
LRP1-201ENST00000243077 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
LRP1-201ENST00000243077 KRTAP21-3Q3LHN1 58 aa5.03□□□□□ -1.6
LRP1-201ENST00000243077 FBN2P35556 2912 aa5.01□□□□□ -1.61
LRP1-201ENST00000243077 TGP01266 2768 aa4.99□□□□□ -1.61
LRP1-201ENST00000243077 KRTAP7-1Q8IUC3 87 aa4.97□□□□□ -1.61
LRP1-201ENST00000243077 COL6A3P12111 3177 aa4.97□□□□□ -1.61
LRP1-201ENST00000243077 PKD1L1Q8TDX9 2849 aa4.96□□□□□ -1.62
LRP1-201ENST00000243077 A8MU10 97 aa4.94□□□□□ -1.62
LRP1-201ENST00000243077 KRTAP13-2Q52LG2 175 aa4.93□□□□□ -1.62
LRP1-201ENST00000243077 VCANP13611 3396 aa4.9□□□□□ -1.62
LRP1-201ENST00000243077 BRCA2P51587 3418 aa4.89□□□□□ -1.63
LRP1-201ENST00000243077 P0C880 135 aa4.87□□□□□ -1.63
LRP1-201ENST00000243077 EYSQ5T1H1 3165 aa4.86□□□□□ -1.63
LRP1-201ENST00000243077 MXRA5Q9NR99 2828 aa4.85□□□□□ -1.63
LRP1-201ENST00000243077 DNAH14Q0VDD8 3507 aa4.85□□□□□ -1.63
LRP1-201ENST00000243077 CDH23Q9H251 3354 aa4.83□□□□□ -1.64
LRP1-201ENST00000243077 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
LRP1-201ENST00000243077 TPRXLQ17RH7 258 aa4.82□□□□□ -1.64
LRP1-201ENST00000243077 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
LRP1-201ENST00000243077 TENM2Q9NT68 2774 aa4.81□□□□□ -1.64
LRP1-201ENST00000243077 USP34Q70CQ2 3546 aa4.8□□□□□ -1.64
LRP1-201ENST00000243077 H0YAA0 97 aa4.8□□□□□ -1.64
LRP1-201ENST00000243077 SRRM2Q9UQ35 2752 aaKnown RBP4.79□□□□□ -1.64
LRP1-201ENST00000243077 SPEGQ15772 3267 aa4.79□□□□□ -1.64
LRP1-201ENST00000243077 VWFP04275 2813 aa4.76□□□□□ -1.65
LRP1-201ENST00000243077 KRTAP1-4P0C5Y4 121 aa4.75□□□□□ -1.65
LRP1-201ENST00000243077 XP32Q5T750 250 aa4.73□□□□□ -1.65
LRP1-201ENST00000243077 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
LRP1-201ENST00000243077 LOC400499M0QZD8 3231 aa4.67□□□□□ -1.66
LRP1-201ENST00000243077 KRTAP10-8P60410 259 aa4.66□□□□□ -1.66
LRP1-201ENST00000243077 KRTAP13-3Q3SY46 172 aa4.63□□□□□ -1.67
LRP1-201ENST00000243077 HRNRQ86YZ3 2850 aaPredicted RBP4.63□□□□□ -1.67
LRP1-201ENST00000243077 ZFHX3Q15911 3703 aa4.62□□□□□ -1.67
LRP1-201ENST00000243077 MEGF8Q7Z7M0 2845 aa4.62□□□□□ -1.67
LRP1-201ENST00000243077 SZT2Q5T011 3432 aa4.62□□□□□ -1.67
LRP1-201ENST00000243077 MYO15AQ9UKN7 3530 aa4.62□□□□□ -1.67
LRP1-201ENST00000243077 SPTBN5Q9NRC6 3674 aaKnown RBP4.62□□□□□ -1.67
LRP1-201ENST00000243077 NBPF19A0A087WUL8 3843 aa4.59□□□□□ -1.67
LRP1-201ENST00000243077 AKAP9Q99996 3911 aa4.58□□□□□ -1.68
LRP1-201ENST00000243077 KRTAP13-4Q3LI77 160 aa4.58□□□□□ -1.68
LRP1-201ENST00000243077 DNAH1Q9P2D7 4330 aa4.56□□□□□ -1.68
LRP1-201ENST00000243077 FBN1P35555 2871 aaKnown RBP4.54□□□□□ -1.68
LRP1-201ENST00000243077 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
LRP1-201ENST00000243077 DCHS1Q96JQ0 3298 aa4.53□□□□□ -1.68
LRP1-201ENST00000243077 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
LRP1-201ENST00000243077 TRRAPQ9Y4A5 3859 aa4.5□□□□□ -1.69
LRP1-201ENST00000243077 INE1O15225 51 aa4.48□□□□□ -1.69
LRP1-201ENST00000243077 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
LRP1-201ENST00000243077 ZFHX4Q86UP3 3567 aa4.43□□□□□ -1.7
LRP1-201ENST00000243077 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
LRP1-201ENST00000243077 KRTAP12-2P59991 146 aa4.42□□□□□ -1.7
LRP1-201ENST00000243077 ANK3Q12955 4377 aaKnown RBP4.38□□□□□ -1.71
LRP1-201ENST00000243077 WDFY3Q8IZQ1 3526 aa4.35□□□□□ -1.71
LRP1-201ENST00000243077 A0A1B0GVY2 172 aa4.35□□□□□ -1.71
LRP1-201ENST00000243077 OTOGQ6ZRI0 2925 aa4.31□□□□□ -1.72
LRP1-201ENST00000243077 LAMA5O15230 3695 aa4.31□□□□□ -1.72
LRP1-201ENST00000243077 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
LRP1-201ENST00000243077 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
LRP1-201ENST00000243077 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
LRP1-201ENST00000243077 ALMS1Q8TCU4 4167 aa4.25□□□□□ -1.73
LRP1-201ENST00000243077 HUWE1Q7Z6Z7 4374 aaKnown RBP4.23□□□□□ -1.73
LRP1-201ENST00000243077 SPENQ96T58 3664 aaKnown RBP4.23□□□□□ -1.73
LRP1-201ENST00000243077 RELNP78509 3460 aa4.21□□□□□ -1.73
LRP1-201ENST00000243077 ASPMQ8IZT6 3477 aa4.2□□□□□ -1.74
LRP1-201ENST00000243077 DNAH2Q9P225 4427 aa4.19□□□□□ -1.74
LRP1-201ENST00000243077 CMYA5Q8N3K9 4069 aa4.16□□□□□ -1.74
LRP1-201ENST00000243077 DNAH3Q8TD57 4116 aa4.15□□□□□ -1.74
LRP1-201ENST00000243077 CSMD1Q96PZ7 3565 aa4.15□□□□□ -1.74
LRP1-201ENST00000243077 SMG1Q96Q15 3661 aaKnown RBP4.14□□□□□ -1.75
LRP1-201ENST00000243077 FRAS1Q86XX4 4008 aa4.12□□□□□ -1.75
LRP1-201ENST00000243077 BSNQ9UPA5 3926 aa4.12□□□□□ -1.75
LRP1-201ENST00000243077 VPS13CQ709C8 3753 aa4.12□□□□□ -1.75
LRP1-201ENST00000243077 DNAH10Q8IVF4 4471 aa4.12□□□□□ -1.75
LRP1-201ENST00000243077 ANK2Q01484 3957 aa4.09□□□□□ -1.75
LRP1-201ENST00000243077 KRTAP3-2Q9BYR7 98 aa4.09□□□□□ -1.75
LRP1-201ENST00000243077 DMDP11532 3685 aa4.09□□□□□ -1.75
LRP1-201ENST00000243077 ZNF469Q96JG9 3925 aaPredicted RBP4.08□□□□□ -1.76
LRP1-201ENST00000243077 DNAH7Q8WXX0 4024 aa4.08□□□□□ -1.76
LRP1-201ENST00000243077 DNAH6Q9C0G6 4158 aa4.08□□□□□ -1.76
LRP1-201ENST00000243077 DNAH11Q96DT5 4516 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms