RNA–Protein interactions for RNA: ENST00000225719.8

CPD-201, Transcript of carboxypeptidase D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPD, Length 9,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-201ENST00000225719 PP632Q6XCG6 107 aa9.03□□□□□ -0.96
CPD-201ENST00000225719 BOD1L1Q8NFC6 3051 aa9.03□□□□□ -0.96
CPD-201ENST00000225719 DMXL1Q9Y485 3027 aa9.02□□□□□ -0.97
CPD-201ENST00000225719 COL6A3P12111 3177 aa9.01□□□□□ -0.97
CPD-201ENST00000225719 ZANQ9Y493 2812 aa9□□□□□ -0.97
CPD-201ENST00000225719 A8MUU9 505 aa9□□□□□ -0.97
CPD-201ENST00000225719 PDZD2O15018 2839 aa9□□□□□ -0.97
CPD-201ENST00000225719 KRTAP11-1Q8IUC1 163 aa8.96□□□□□ -0.97
CPD-201ENST00000225719 TENM1Q9UKZ4 2725 aa8.95□□□□□ -0.98
CPD-201ENST00000225719 TNRC18O15417 2968 aaPredicted RBP8.94□□□□□ -0.98
CPD-201ENST00000225719 CDH23Q9H251 3354 aa8.93□□□□□ -0.98
CPD-201ENST00000225719 ADGRG4Q8IZF6 3080 aa8.91□□□□□ -0.98
CPD-201ENST00000225719 Q5VSD8 79 aa8.89□□□□□ -0.99
CPD-201ENST00000225719 VCANP13611 3396 aa8.89□□□□□ -0.99
CPD-201ENST00000225719 KRTAP1-5Q9BYS1 174 aa8.87□□□□□ -0.99
CPD-201ENST00000225719 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
CPD-201ENST00000225719 FBN2P35556 2912 aa8.86□□□□□ -0.99
CPD-201ENST00000225719 ATMQ13315 3056 aa8.86□□□□□ -0.99
CPD-201ENST00000225719 DCHS2Q6V1P9 2916 aa8.84□□□□□ -0.99
CPD-201ENST00000225719 A8MU10 97 aa8.84□□□□□ -0.99
CPD-201ENST00000225719 TNP1P09430 55 aa8.82□□□□□ -1
CPD-201ENST00000225719 TGP01266 2768 aa8.81□□□□□ -1
CPD-201ENST00000225719 C10orf95Q9H7T3 257 aa8.8□□□□□ -1
CPD-201ENST00000225719 KRTAP10-1P60331 282 aa8.79□□□□□ -1
CPD-201ENST00000225719 TENM3Q9P273 2699 aa8.77□□□□□ -1.01
CPD-201ENST00000225719 HRNRQ86YZ3 2850 aaPredicted RBP8.76□□□□□ -1.01
CPD-201ENST00000225719 SRRM2Q9UQ35 2752 aaKnown RBP8.74□□□□□ -1.01
CPD-201ENST00000225719 KRTAP10-2P60368 255 aa8.71□□□□□ -1.02
CPD-201ENST00000225719 WDFY3Q8IZQ1 3526 aa8.7□□□□□ -1.02
CPD-201ENST00000225719 CFAP47Q6ZTR5 3102 aa8.7□□□□□ -1.02
CPD-201ENST00000225719 MXRA5Q9NR99 2828 aa8.69□□□□□ -1.02
CPD-201ENST00000225719 P0C880 135 aa8.65□□□□□ -1.02
CPD-201ENST00000225719 SPTBN5Q9NRC6 3674 aaKnown RBP8.65□□□□□ -1.03
CPD-201ENST00000225719 CELSR1Q9NYQ6 3014 aa8.61□□□□□ -1.03
CPD-201ENST00000225719 SPEGQ15772 3267 aa8.55□□□□□ -1.04
CPD-201ENST00000225719 KRTAP13-1Q8IUC0 172 aa8.54□□□□□ -1.04
CPD-201ENST00000225719 Q6ZRN7 208 aaPredicted RBP8.54□□□□□ -1.04
CPD-201ENST00000225719 H0YAA0 97 aa8.51□□□□□ -1.05
CPD-201ENST00000225719 VWFP04275 2813 aa8.47□□□□□ -1.05
CPD-201ENST00000225719 SZT2Q5T011 3432 aa8.47□□□□□ -1.05
CPD-201ENST00000225719 MYO15AQ9UKN7 3530 aa8.46□□□□□ -1.06
CPD-201ENST00000225719 EYSQ5T1H1 3165 aa8.44□□□□□ -1.06
CPD-201ENST00000225719 KRTAP13-2Q52LG2 175 aa8.41□□□□□ -1.06
CPD-201ENST00000225719 KRTAP7-1Q8IUC3 87 aa8.38□□□□□ -1.07
CPD-201ENST00000225719 PKD1L1Q8TDX9 2849 aa8.36□□□□□ -1.07
CPD-201ENST00000225719 ASPMQ8IZT6 3477 aa8.35□□□□□ -1.07
CPD-201ENST00000225719 LAMA5O15230 3695 aa8.32□□□□□ -1.08
CPD-201ENST00000225719 ZFHX3Q15911 3703 aa8.31□□□□□ -1.08
CPD-201ENST00000225719 TENM4Q6N022 2769 aa8.27□□□□□ -1.09
CPD-201ENST00000225719 DMDP11532 3685 aa8.25□□□□□ -1.09
CPD-201ENST00000225719 LOC400499M0QZD8 3231 aa8.24□□□□□ -1.09
CPD-201ENST00000225719 SMG1Q96Q15 3661 aaKnown RBP8.2□□□□□ -1.1
CPD-201ENST00000225719 SPENQ96T58 3664 aaKnown RBP8.2□□□□□ -1.1
CPD-201ENST00000225719 COL7A1Q02388 2944 aa8.19□□□□□ -1.1
CPD-201ENST00000225719 PRO2289Q9P1D8 64 aa8.16□□□□□ -1.1
CPD-201ENST00000225719 KRTAP10-8P60410 259 aa8.15□□□□□ -1.11
CPD-201ENST00000225719 TENM2Q9NT68 2774 aa8.12□□□□□ -1.11
CPD-201ENST00000225719 RELNP78509 3460 aa8.11□□□□□ -1.11
CPD-201ENST00000225719 NBPF19A0A087WUL8 3843 aa8.08□□□□□ -1.12
CPD-201ENST00000225719 ZFHX4Q86UP3 3567 aa8.07□□□□□ -1.12
CPD-201ENST00000225719 XP32Q5T750 250 aa8.05□□□□□ -1.12
CPD-201ENST00000225719 TPRXLQ17RH7 258 aa8.04□□□□□ -1.12
CPD-201ENST00000225719 DCHS1Q96JQ0 3298 aa8.03□□□□□ -1.12
CPD-201ENST00000225719 INE1O15225 51 aa8.02□□□□□ -1.13
CPD-201ENST00000225719 CSMD1Q96PZ7 3565 aa8□□□□□ -1.13
CPD-201ENST00000225719 FBN1P35555 2871 aaKnown RBP7.99□□□□□ -1.13
CPD-201ENST00000225719 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
CPD-201ENST00000225719 KRTAP21-3Q3LHN1 58 aa7.95□□□□□ -1.14
CPD-201ENST00000225719 KRTAP13-4Q3LI77 160 aa7.95□□□□□ -1.14
CPD-201ENST00000225719 MEGF8Q7Z7M0 2845 aa7.94□□□□□ -1.14
CPD-201ENST00000225719 VPS13CQ709C8 3753 aa7.88□□□□□ -1.15
CPD-201ENST00000225719 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
CPD-201ENST00000225719 OTOGQ6ZRI0 2925 aa7.81□□□□□ -1.16
CPD-201ENST00000225719 KRTAP12-2P59991 146 aa7.81□□□□□ -1.16
CPD-201ENST00000225719 FBN3Q75N90 2809 aa7.79□□□□□ -1.16
CPD-201ENST00000225719 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
CPD-201ENST00000225719 AKAP9Q99996 3911 aa7.73□□□□□ -1.17
CPD-201ENST00000225719 SVEP1Q4LDE5 3571 aa7.71□□□□□ -1.17
CPD-201ENST00000225719 A0A1B0GVY2 172 aa7.71□□□□□ -1.17
CPD-201ENST00000225719 KRTAP12-1P59990 96 aa7.68□□□□□ -1.18
CPD-201ENST00000225719 CUBNO60494 3623 aa7.68□□□□□ -1.18
CPD-201ENST00000225719 KRTAP15-1Q3LI76 137 aa7.63□□□□□ -1.19
CPD-201ENST00000225719 TRRAPQ9Y4A5 3859 aa7.61□□□□□ -1.19
CPD-201ENST00000225719 MUC3AQ02505 3323 aa7.47□□□□□ -1.21
CPD-201ENST00000225719 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.23
CPD-201ENST00000225719 CSMD3Q7Z407 3707 aa7.32□□□□□ -1.24
CPD-201ENST00000225719 CSMD2Q7Z408 3487 aa7.3□□□□□ -1.24
CPD-201ENST00000225719 BSNQ9UPA5 3926 aa7.28□□□□□ -1.24
CPD-201ENST00000225719 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
CPD-201ENST00000225719 KRTAP3-1Q9BYR8 98 aa7.22□□□□□ -1.25
CPD-201ENST00000225719 ALMS1Q8TCU4 4167 aa7.02□□□□□ -1.29
CPD-201ENST00000225719 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
CPD-201ENST00000225719 LYSTQ99698 3801 aa6.94□□□□□ -1.3
CPD-201ENST00000225719 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.3
CPD-201ENST00000225719 ZNF469Q96JG9 3925 aaPredicted RBP6.88□□□□□ -1.31
CPD-201ENST00000225719 KRTAP12-3P60328 96 aa6.84□□□□□ -1.31
CPD-201ENST00000225719 KRTAP3-3Q9BYR6 98 aa6.81□□□□□ -1.32
CPD-201ENST00000225719 HECTD4Q9Y4D8 3996 aa6.71□□□□□ -1.34
CPD-201ENST00000225719 CMYA5Q8N3K9 4069 aa6.63□□□□□ -1.35
CPD-201ENST00000225719 DNAH3Q8TD57 4116 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms