RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 ZNF861PO60384 105 aa10.98□□□□□ -0.65
CACTIN-201ENST00000221899 A6NED7 52 aa10.98□□□□□ -0.65
CACTIN-201ENST00000221899 DNAH8Q96JB1 4490 aa10.96□□□□□ -0.65
CACTIN-201ENST00000221899 SPTSSBQ8NFR3 76 aa10.96□□□□□ -0.65
CACTIN-201ENST00000221899 HECTD4Q9Y4D8 3996 aa10.96□□□□□ -0.65
CACTIN-201ENST00000221899 Q75L30 129 aa10.96□□□□□ -0.66
CACTIN-201ENST00000221899 HRES1P13985 223 aa10.95□□□□□ -0.66
CACTIN-201ENST00000221899 LCA10Q71F78 164 aa10.95□□□□□ -0.66
CACTIN-201ENST00000221899 LOC101927531A0A1B0GV80 90 aa10.94□□□□□ -0.66
CACTIN-201ENST00000221899 CIRBP-AS1Q8TBR5 109 aa10.93□□□□□ -0.66
CACTIN-201ENST00000221899 PLAC8Q9NZF1 115 aa10.93□□□□□ -0.66
CACTIN-201ENST00000221899 Q5W150 140 aa10.92□□□□□ -0.66
CACTIN-201ENST00000221899 VPS13DQ5THJ4 4388 aa10.91□□□□□ -0.66
CACTIN-201ENST00000221899 KMT2AQ03164 3969 aa10.89□□□□□ -0.67
CACTIN-201ENST00000221899 LINC01558Q9Y6Z2 57 aa10.88□□□□□ -0.67
CACTIN-201ENST00000221899 FBN3Q75N90 2809 aa10.86□□□□□ -0.67
CACTIN-201ENST00000221899 TGP01266 2768 aa10.85□□□□□ -0.67
CACTIN-201ENST00000221899 IGLV7-43P04211 117 aa10.84□□□□□ -0.67
CACTIN-201ENST00000221899 PRR26Q8N8Z3 221 aa10.83□□□□□ -0.68
CACTIN-201ENST00000221899 DNAH2Q9P225 4427 aa10.83□□□□□ -0.68
CACTIN-201ENST00000221899 DNAH17Q9UFH2 4485 aa10.83□□□□□ -0.68
CACTIN-201ENST00000221899 MEGF8Q7Z7M0 2845 aa10.82□□□□□ -0.68
CACTIN-201ENST00000221899 SPINK7P58062 85 aa10.8□□□□□ -0.68
CACTIN-201ENST00000221899 KRTAP13-3Q3SY46 172 aa10.8□□□□□ -0.68
CACTIN-201ENST00000221899 RETNLBQ9BQ08 111 aa10.8□□□□□ -0.68
CACTIN-201ENST00000221899 ATP11AUNQ6ZP68 121 aa10.79□□□□□ -0.68
CACTIN-201ENST00000221899 CDC42SE1Q9NRR8 79 aa10.79□□□□□ -0.68
CACTIN-201ENST00000221899 PRKDCP78527 4128 aaKnown RBP10.79□□□□□ -0.68
CACTIN-201ENST00000221899 C1orf134Q5TEV5 83 aa10.75□□□□□ -0.69
CACTIN-201ENST00000221899 KTN1-AS1Q86SY8 53 aa10.71□□□□□ -0.7
CACTIN-201ENST00000221899 A6NN06 94 aa10.7□□□□□ -0.7
CACTIN-201ENST00000221899 ALMS1Q8TCU4 4167 aa10.7□□□□□ -0.7
CACTIN-201ENST00000221899 LINC00313P59037 77 aa10.69□□□□□ -0.7
CACTIN-201ENST00000221899 SSBP3-AS1Q7Z2R9 100 aa10.69□□□□□ -0.7
CACTIN-201ENST00000221899 DNAH6Q9C0G6 4158 aa10.69□□□□□ -0.7
CACTIN-201ENST00000221899 C8orf87E5RJ46 101 aa10.68□□□□□ -0.7
CACTIN-201ENST00000221899 ACYP2P14621 99 aa10.68□□□□□ -0.7
CACTIN-201ENST00000221899 LY6G6CO95867 125 aa10.68□□□□□ -0.7
CACTIN-201ENST00000221899 KRTAP10-2P60368 255 aa10.66□□□□□ -0.7
CACTIN-201ENST00000221899 KRTAP13-2Q52LG2 175 aa10.63□□□□□ -0.71
CACTIN-201ENST00000221899 DNAH11Q96DT5 4516 aa10.62□□□□□ -0.71
CACTIN-201ENST00000221899 DMAC1Q96GE9 116 aa10.62□□□□□ -0.71
CACTIN-201ENST00000221899 FAM229AH3BQW9 127 aa10.61□□□□□ -0.71
CACTIN-201ENST00000221899 IGKV2-30P06310 120 aa10.57□□□□□ -0.72
CACTIN-201ENST00000221899 RBM12B-AS1Q9P1G2 102 aa10.56□□□□□ -0.72
CACTIN-201ENST00000221899 DNAH5Q8TE73 4624 aa10.55□□□□□ -0.72
CACTIN-201ENST00000221899 IGKV2D-30A0A075B6S6 120 aa10.53□□□□□ -0.72
CACTIN-201ENST00000221899 KRTAP16-1A8MUX0 517 aa10.52□□□□□ -0.73
CACTIN-201ENST00000221899 A0A1B0GU69 56 aa10.51□□□□□ -0.73
CACTIN-201ENST00000221899 C7orf65Q6ZTY9 151 aa10.51□□□□□ -0.73
CACTIN-201ENST00000221899 KRTAP10-1P60331 282 aa10.5□□□□□ -0.73
CACTIN-201ENST00000221899 LRP1BQ9NZR2 4599 aa10.48□□□□□ -0.73
CACTIN-201ENST00000221899 KRTAP1-4P0C5Y4 121 aa10.45□□□□□ -0.74
CACTIN-201ENST00000221899 Q6ZSA8 131 aa10.41□□□□□ -0.74
CACTIN-201ENST00000221899 DNHD1Q96M86 4753 aa10.38□□□□□ -0.75
CACTIN-201ENST00000221899 PLA2G1BP04054 148 aaKnown RBP10.37□□□□□ -0.75
CACTIN-201ENST00000221899 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
CACTIN-201ENST00000221899 HYDINQ4G0P3 5121 aa10.37□□□□□ -0.75
CACTIN-201ENST00000221899 PKD1P98161 4303 aa10.36□□□□□ -0.75
CACTIN-201ENST00000221899 VPS13BQ7Z7G8 4022 aa10.35□□□□□ -0.75
CACTIN-201ENST00000221899 TYMSOSQ8TAI1 123 aa10.35□□□□□ -0.75
CACTIN-201ENST00000221899 PRAC1Q96KF2 57 aa10.35□□□□□ -0.75
CACTIN-201ENST00000221899 KRTAP21-3Q3LHN1 58 aa10.35□□□□□ -0.75
CACTIN-201ENST00000221899 SPINK1P00995 79 aa10.34□□□□□ -0.75
CACTIN-201ENST00000221899 SPATA8Q6RVD6 105 aa10.33□□□□□ -0.76
CACTIN-201ENST00000221899 MIR22HGQ0VDD5 57 aa10.32□□□□□ -0.76
CACTIN-201ENST00000221899 ADM2Q7Z4H4 148 aa10.32□□□□□ -0.76
CACTIN-201ENST00000221899 Q8N1X5 172 aa10.31□□□□□ -0.76
CACTIN-201ENST00000221899 UQCR11O14957 56 aa10.3□□□□□ -0.76
CACTIN-201ENST00000221899 FAT2Q9NYQ8 4349 aa10.27□□□□□ -0.77
CACTIN-201ENST00000221899 LINC00304Q8N9R0 145 aa10.18□□□□□ -0.78
CACTIN-201ENST00000221899 C9orf92A6NGG3 77 aa10.14□□□□□ -0.79
CACTIN-201ENST00000221899 PKHD1P08F94 4074 aa10.11□□□□□ -0.79
CACTIN-201ENST00000221899 SMR3BP02814 79 aaPredicted RBP10.11□□□□□ -0.79
CACTIN-201ENST00000221899 RPS29P62273 56 aaKnown RBP10.01□□□□□ -0.81
CACTIN-201ENST00000221899 CSAG1Q6PB30 78 aa9.98□□□□□ -0.81
CACTIN-201ENST00000221899 KRTAP3-1Q9BYR8 98 aa9.98□□□□□ -0.81
CACTIN-201ENST00000221899 H0YAA0 97 aa9.97□□□□□ -0.81
CACTIN-201ENST00000221899 A8MUU9 505 aa9.97□□□□□ -0.81
CACTIN-201ENST00000221899 LINC01554Q52M75 96 aa9.96□□□□□ -0.81
CACTIN-201ENST00000221899 C20orf166-AS1Q96NR2 134 aa9.96□□□□□ -0.82
CACTIN-201ENST00000221899 SACSQ9NZJ4 4579 aa9.92□□□□□ -0.82
CACTIN-201ENST00000221899 FAT1Q14517 4588 aa9.9□□□□□ -0.82
CACTIN-201ENST00000221899 DYNC1H1Q14204 4646 aaKnown RBP9.89□□□□□ -0.83
CACTIN-201ENST00000221899 A0A1B0GU33 70 aa9.88□□□□□ -0.83
CACTIN-201ENST00000221899 H1FX-AS1Q4G0G2 97 aa9.82□□□□□ -0.84
CACTIN-201ENST00000221899 KRTAP10-4P60372 401 aaPredicted RBP9.82□□□□□ -0.84
CACTIN-201ENST00000221899 PKHD1L1Q86WI1 4243 aa9.82□□□□□ -0.84
CACTIN-201ENST00000221899 H3BS24 57 aa9.77□□□□□ -0.84
CACTIN-201ENST00000221899 APOBP04114 4563 aaKnown RBP9.76□□□□□ -0.85
CACTIN-201ENST00000221899 COX6B2Q6YFQ2 88 aa9.74□□□□□ -0.85
CACTIN-201ENST00000221899 A0A1B0GVY2 172 aa9.72□□□□□ -0.85
CACTIN-201ENST00000221899 FLG2Q5D862 2391 aaPredicted RBP9.71□□□□□ -0.85
CACTIN-201ENST00000221899 CRIPTQ9P021 101 aa9.63□□□□□ -0.87
CACTIN-201ENST00000221899 KRTAP25-1Q3LHN0 102 aa9.63□□□□□ -0.87
CACTIN-201ENST00000221899 DMBT1Q9UGM3 2413 aaPredicted RBP9.6□□□□□ -0.87
CACTIN-201ENST00000221899 K7ERS5 55 aa9.57□□□□□ -0.88
CACTIN-201ENST00000221899 LRP1Q07954 4544 aaKnown RBP9.56□□□□□ -0.88
CACTIN-201ENST00000221899 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
CACTIN-201ENST00000221899 FAT3Q8TDW7 4589 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms