RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 FAM240AA0A1B0GVK7 77 aa8.69□□□□□ -1.02
COMMD4-205ENST00000562310 XGP55808 180 aa8.69□□□□□ -1.02
COMMD4-205ENST00000562310 SPRR4Q96PI1 79 aa8.69□□□□□ -1.02
COMMD4-205ENST00000562310 GAGE2AQ6NT46 116 aa8.68□□□□□ -1.02
COMMD4-205ENST00000562310 TRBV7-4A0A0J9YYF1 115 aa8.67□□□□□ -1.02
COMMD4-205ENST00000562310 ACYP1P07311 99 aa8.67□□□□□ -1.02
COMMD4-205ENST00000562310 RPL37AP61513 92 aaKnown RBP8.67□□□□□ -1.02
COMMD4-205ENST00000562310 LINC00483Q53H64 154 aa8.67□□□□□ -1.02
COMMD4-205ENST00000562310 SMIM29Q86T20 159 aa8.67□□□□□ -1.02
COMMD4-205ENST00000562310 CCKP06307 115 aa8.66□□□□□ -1.02
COMMD4-205ENST00000562310 C3orf22Q8N5N4 141 aa8.66□□□□□ -1.02
COMMD4-205ENST00000562310 Q6ZQT0 140 aa8.65□□□□□ -1.02
COMMD4-205ENST00000562310 IGLV8-61A0A075B6I0 122 aa8.64□□□□□ -1.03
COMMD4-205ENST00000562310 PKHD1P08F94 4074 aa8.63□□□□□ -1.03
COMMD4-205ENST00000562310 CDK2AP2O75956 126 aa8.63□□□□□ -1.03
COMMD4-205ENST00000562310 DYNC1H1Q14204 4646 aaKnown RBP8.62□□□□□ -1.03
COMMD4-205ENST00000562310 Q6JHZ5 121 aa8.61□□□□□ -1.03
COMMD4-205ENST00000562310 LRP1BQ9NZR2 4599 aa8.61□□□□□ -1.03
COMMD4-205ENST00000562310 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
COMMD4-205ENST00000562310 A0A1B0GW54 56 aa8.58□□□□□ -1.04
COMMD4-205ENST00000562310 SPINK6Q6UWN8 80 aa8.58□□□□□ -1.04
COMMD4-205ENST00000562310 SMR3BP02814 79 aaPredicted RBP8.57□□□□□ -1.04
COMMD4-205ENST00000562310 VPS25Q9BRG1 176 aa8.57□□□□□ -1.04
COMMD4-205ENST00000562310 FAM229BQ4G0N7 80 aa8.56□□□□□ -1.04
COMMD4-205ENST00000562310 C9orf153Q5TBE3 101 aa8.56□□□□□ -1.04
COMMD4-205ENST00000562310 IGFL1Q6UW32 110 aa8.56□□□□□ -1.04
COMMD4-205ENST00000562310 Q8NBF4 154 aa8.56□□□□□ -1.04
COMMD4-205ENST00000562310 PLA2G1BP04054 148 aaKnown RBP8.55□□□□□ -1.04
COMMD4-205ENST00000562310 IGLV9-49A0A0B4J1Y8 123 aa8.54□□□□□ -1.04
COMMD4-205ENST00000562310 FAM229AH3BQW9 127 aa8.54□□□□□ -1.04
COMMD4-205ENST00000562310 CDIP1Q9H305 208 aa8.54□□□□□ -1.04
COMMD4-205ENST00000562310 A0A1W2PNM2 257 aa8.52□□□□□ -1.05
COMMD4-205ENST00000562310 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.05
COMMD4-205ENST00000562310 LINC00846Q9NV44 126 aa8.52□□□□□ -1.05
COMMD4-205ENST00000562310 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
COMMD4-205ENST00000562310 CRYGAP11844 174 aa8.51□□□□□ -1.05
COMMD4-205ENST00000562310 MOBPQ13875 183 aa8.51□□□□□ -1.05
COMMD4-205ENST00000562310 Q6Q795 121 aa8.51□□□□□ -1.05
COMMD4-205ENST00000562310 UBL5Q9BZL1 73 aa8.51□□□□□ -1.05
COMMD4-205ENST00000562310 APOBP04114 4563 aaKnown RBP8.51□□□□□ -1.05
COMMD4-205ENST00000562310 ABCA13Q86UQ4 5058 aa8.5□□□□□ -1.05
COMMD4-205ENST00000562310 ANAPC11Q9NYG5 84 aa8.5□□□□□ -1.05
COMMD4-205ENST00000562310 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
COMMD4-205ENST00000562310 LINC00643Q86TS7 51 aa8.49□□□□□ -1.05
COMMD4-205ENST00000562310 SSBP3-AS1Q7Z2R9 100 aa8.48□□□□□ -1.05
COMMD4-205ENST00000562310 Q5VSD8 79 aa8.46□□□□□ -1.06
COMMD4-205ENST00000562310 ATP5EP2Q5VTU8 51 aa8.46□□□□□ -1.06
COMMD4-205ENST00000562310 TRBV7-7A0A0K0K1E9 115 aa8.45□□□□□ -1.06
COMMD4-205ENST00000562310 Q6ZVQ6 151 aa8.45□□□□□ -1.06
COMMD4-205ENST00000562310 A0A087X002 238 aa8.44□□□□□ -1.06
COMMD4-205ENST00000562310 A0A0G2JQZ4 141 aa8.44□□□□□ -1.06
COMMD4-205ENST00000562310 CD164Q04900 197 aa8.44□□□□□ -1.06
COMMD4-205ENST00000562310 NREPQ16612 68 aa8.43□□□□□ -1.06
COMMD4-205ENST00000562310 SIGMAR1Q99720 223 aa8.43□□□□□ -1.06
COMMD4-205ENST00000562310 VPS13BQ7Z7G8 4022 aa8.43□□□□□ -1.06
COMMD4-205ENST00000562310 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
COMMD4-205ENST00000562310 A0A087WSZ3 146 aa8.41□□□□□ -1.06
COMMD4-205ENST00000562310 SS18L2Q9UHA2 77 aa8.41□□□□□ -1.06
COMMD4-205ENST00000562310 MT-ATP8P03928 68 aa8.4□□□□□ -1.06
COMMD4-205ENST00000562310 Q8N1X5 172 aa8.39□□□□□ -1.07
COMMD4-205ENST00000562310 CXCL6P80162 114 aa8.38□□□□□ -1.07
COMMD4-205ENST00000562310 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
COMMD4-205ENST00000562310 IMUPQ9GZP8 106 aa8.37□□□□□ -1.07
COMMD4-205ENST00000562310 KRTAP4-5Q9BYR2 181 aa8.36□□□□□ -1.07
COMMD4-205ENST00000562310 IGKV3D-7A0A0C4DH55 119 aa8.35□□□□□ -1.07
COMMD4-205ENST00000562310 BPY2O14599 106 aa8.35□□□□□ -1.07
COMMD4-205ENST00000562310 HRCT1Q6UXD1 115 aa8.35□□□□□ -1.07
COMMD4-205ENST00000562310 PRR26Q8N8Z3 221 aa8.34□□□□□ -1.07
COMMD4-205ENST00000562310 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
COMMD4-205ENST00000562310 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
COMMD4-205ENST00000562310 HSPG2P98160 4391 aa8.31□□□□□ -1.08
COMMD4-205ENST00000562310 Q5XG85 94 aa8.31□□□□□ -1.08
COMMD4-205ENST00000562310 SPAG11AQ6PDA7 123 aa8.31□□□□□ -1.08
COMMD4-205ENST00000562310 J3KT08 172 aa8.3□□□□□ -1.08
COMMD4-205ENST00000562310 SPINK1P00995 79 aa8.3□□□□□ -1.08
COMMD4-205ENST00000562310 ASB16-AS1Q495Z4 193 aa8.3□□□□□ -1.08
COMMD4-205ENST00000562310 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
COMMD4-205ENST00000562310 LINC00472Q9H8W2 130 aa8.3□□□□□ -1.08
COMMD4-205ENST00000562310 FAT1Q14517 4588 aa8.3□□□□□ -1.08
COMMD4-205ENST00000562310 PKHD1L1Q86WI1 4243 aa8.3□□□□□ -1.08
COMMD4-205ENST00000562310 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
COMMD4-205ENST00000562310 SCGB1A1P11684 91 aa8.27□□□□□ -1.09
COMMD4-205ENST00000562310 HIST1H4AP62805 103 aaKnown RBP8.27□□□□□ -1.09
COMMD4-205ENST00000562310 Q96NJ1 140 aa8.25□□□□□ -1.09
COMMD4-205ENST00000562310 HERC1Q15751 4861 aa8.25□□□□□ -1.09
COMMD4-205ENST00000562310 DSCR10P59022 87 aa8.24□□□□□ -1.09
COMMD4-205ENST00000562310 IGKV4-1P06312 121 aa8.23□□□□□ -1.09
COMMD4-205ENST00000562310 A8MWP4 228 aa8.22□□□□□ -1.09
COMMD4-205ENST00000562310 DEFB116Q30KQ4 102 aa8.22□□□□□ -1.09
COMMD4-205ENST00000562310 NDUFB1O75438 58 aa8.21□□□□□ -1.1
COMMD4-205ENST00000562310 K7EQZ3 153 aa8.2□□□□□ -1.1
COMMD4-205ENST00000562310 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
COMMD4-205ENST00000562310 A0A087WVE0 104 aa8.19□□□□□ -1.1
COMMD4-205ENST00000562310 Q8N9L7 120 aa8.19□□□□□ -1.1
COMMD4-205ENST00000562310 FAM236AA0A1B0GUQ0 79 aa8.18□□□□□ -1.1
COMMD4-205ENST00000562310 FAM236BA0A1B0GV22 79 aa8.18□□□□□ -1.1
COMMD4-205ENST00000562310 PRR15Q8IV56 129 aa8.18□□□□□ -1.1
COMMD4-205ENST00000562310 OXTP01178 125 aa8.17□□□□□ -1.1
COMMD4-205ENST00000562310 C1orf195Q5TG92 126 aa8.17□□□□□ -1.1
COMMD4-205ENST00000562310 A0A1B0GVX0 72 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms