RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 SCN11AQ9UI33 1791 aa-0.63□□□□□ -2.51
LEMD3-206ENST00000545026 UTP20O75691 2785 aaKnown RBP-0.63□□□□□ -2.51
LEMD3-206ENST00000545026 ANKRD50Q9ULJ7 1429 aa-0.64□□□□□ -2.51
LEMD3-206ENST00000545026 ANK3Q12955 4377 aaKnown RBP-0.64□□□□□ -2.51
LEMD3-206ENST00000545026 NEXMIFQ5QGS0 1516 aa-0.64□□□□□ -2.51
LEMD3-206ENST00000545026 BIRC6Q9NR09 4857 aa-0.64□□□□□ -2.51
LEMD3-206ENST00000545026 APOBP04114 4563 aaKnown RBP-0.64□□□□□ -2.51
LEMD3-206ENST00000545026 CCNB3Q8WWL7 1395 aa-0.64□□□□□ -2.51
LEMD3-206ENST00000545026 PKIAP61925 76 aa-0.64□□□□□ -2.51
LEMD3-206ENST00000545026 DNAH2Q9P225 4427 aa-0.64□□□□□ -2.51
LEMD3-206ENST00000545026 WDR87Q6ZQQ6 2873 aa-0.64□□□□□ -2.51
LEMD3-206ENST00000545026 USP32Q8NFA0 1604 aa-0.64□□□□□ -2.51
LEMD3-206ENST00000545026 NBEAQ8NFP9 2946 aa-0.65□□□□□ -2.51
LEMD3-206ENST00000545026 RYR1P21817 5038 aa-0.65□□□□□ -2.51
LEMD3-206ENST00000545026 IQCF6A8MYZ5 107 aa-0.65□□□□□ -2.51
LEMD3-206ENST00000545026 GAFA1Q96PS6 74 aa-0.65□□□□□ -2.51
LEMD3-206ENST00000545026 C20orf78Q9BR46 151 aa-0.65□□□□□ -2.51
LEMD3-206ENST00000545026 WIZO95785 1651 aa-0.65□□□□□ -2.51
LEMD3-206ENST00000545026 CCDC88BA6NC98 1476 aa-0.66□□□□□ -2.51
LEMD3-206ENST00000545026 NBEAL2Q6ZNJ1 2754 aa-0.66□□□□□ -2.51
LEMD3-206ENST00000545026 A0A0C4DFX4 3053 aa-0.66□□□□□ -2.51
LEMD3-206ENST00000545026 PLECQ15149 4684 aaKnown RBP-0.66□□□□□ -2.52
LEMD3-206ENST00000545026 ACACBO00763 2458 aa-0.66□□□□□ -2.52
LEMD3-206ENST00000545026 DEPDC5O75140 1603 aa-0.67□□□□□ -2.52
LEMD3-206ENST00000545026 KIF14Q15058 1648 aa-0.67□□□□□ -2.52
LEMD3-206ENST00000545026 PPLO60437 1756 aa-0.67□□□□□ -2.52
LEMD3-206ENST00000545026 URB2Q14146 1524 aaKnown RBP-0.67□□□□□ -2.52
LEMD3-206ENST00000545026 DSPP15924 2871 aaKnown RBP-0.67□□□□□ -2.52
LEMD3-206ENST00000545026 C9orf92A6NGG3 77 aa-0.67□□□□□ -2.52
LEMD3-206ENST00000545026 KIAA1109Q2LD37 5005 aa-0.67□□□□□ -2.52
LEMD3-206ENST00000545026 LAMA2P24043 3122 aaKnown RBP-0.67□□□□□ -2.52
LEMD3-206ENST00000545026 MYMXA0A1B0GTQ4 84 aa-0.68□□□□□ -2.52
LEMD3-206ENST00000545026 NDUFB1O75438 58 aa-0.68□□□□□ -2.52
LEMD3-206ENST00000545026 NDUFA3O95167 84 aa-0.68□□□□□ -2.52
LEMD3-206ENST00000545026 DOT1LQ8TEK3 1739 aa-0.68□□□□□ -2.52
LEMD3-206ENST00000545026 PLIN4Q96Q06 1357 aa-0.69□□□□□ -2.52
LEMD3-206ENST00000545026 THOC2Q8NI27 1593 aaKnown RBP-0.69□□□□□ -2.52
LEMD3-206ENST00000545026 DIP2BQ9P265 1576 aa-0.69□□□□□ -2.52
LEMD3-206ENST00000545026 USP9XQ93008 2570 aaPredicted RBP-0.69□□□□□ -2.52
LEMD3-206ENST00000545026 RABAC1Q9UI14 185 aa-0.69□□□□□ -2.52
LEMD3-206ENST00000545026 DNAH1Q9P2D7 4330 aa-0.69□□□□□ -2.52
LEMD3-206ENST00000545026 MAP3K1Q13233 1512 aa-0.69□□□□□ -2.52
LEMD3-206ENST00000545026 LAMA3Q16787 3333 aa-0.69□□□□□ -2.52
LEMD3-206ENST00000545026 DNHD1Q96M86 4753 aa-0.7□□□□□ -2.52
LEMD3-206ENST00000545026 TRAV21A0A0B4J279 112 aa-0.7□□□□□ -2.52
LEMD3-206ENST00000545026 C3orf79P0CE67 100 aa-0.7□□□□□ -2.52
LEMD3-206ENST00000545026 SNRPFP62306 86 aaKnown RBP-0.7□□□□□ -2.52
LEMD3-206ENST00000545026 TLN2Q9Y4G6 2542 aa-0.7□□□□□ -2.52
LEMD3-206ENST00000545026 PIK3C2BO00750 1634 aa-0.71□□□□□ -2.52
LEMD3-206ENST00000545026 RNF213Q63HN8 5207 aa-0.71□□□□□ -2.52
LEMD3-206ENST00000545026 ZNF831Q5JPB2 1677 aa-0.71□□□□□ -2.52
LEMD3-206ENST00000545026 LCE6AA0A183 80 aa-0.71□□□□□ -2.52
LEMD3-206ENST00000545026 PYY3Q5JQD4 70 aa-0.71□□□□□ -2.52
LEMD3-206ENST00000545026 LINC00643Q86TS7 51 aa-0.71□□□□□ -2.52
LEMD3-206ENST00000545026 WFDC9Q8NEX5 89 aa-0.71□□□□□ -2.52
LEMD3-206ENST00000545026 S4R3F8 94 aa-0.71□□□□□ -2.52
LEMD3-206ENST00000545026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.71□□□□□ -2.52
LEMD3-206ENST00000545026 SACSQ9NZJ4 4579 aa-0.72□□□□□ -2.52
LEMD3-206ENST00000545026 CMYA5Q8N3K9 4069 aa-0.72□□□□□ -2.52
LEMD3-206ENST00000545026 ARFGEF2Q9Y6D5 1785 aa-0.72□□□□□ -2.52
LEMD3-206ENST00000545026 RELNP78509 3460 aa-0.72□□□□□ -2.52
LEMD3-206ENST00000545026 K7EP34 96 aa-0.72□□□□□ -2.52
LEMD3-206ENST00000545026 DEFA5Q01523 94 aa-0.72□□□□□ -2.52
LEMD3-206ENST00000545026 V9GYS6 101 aa-0.72□□□□□ -2.52
LEMD3-206ENST00000545026 NCOA2Q15596 1464 aa-0.73□□□□□ -2.53
LEMD3-206ENST00000545026 RYR2Q92736 4967 aa-0.73□□□□□ -2.53
LEMD3-206ENST00000545026 PVALEFA0A1B0GWK0 134 aa-0.73□□□□□ -2.53
LEMD3-206ENST00000545026 CEBPZOSA8MTT3 80 aa-0.73□□□□□ -2.53
LEMD3-206ENST00000545026 ACYP1P07311 99 aa-0.73□□□□□ -2.53
LEMD3-206ENST00000545026 DEFB110Q30KQ9 67 aa-0.73□□□□□ -2.53
LEMD3-206ENST00000545026 PRO3102Q9H379 93 aa-0.73□□□□□ -2.53
LEMD3-206ENST00000545026 C5orf42Q9H799 3197 aa-0.73□□□□□ -2.53
LEMD3-206ENST00000545026 DDX60LQ5H9U9 1706 aaKnown RBP-0.74□□□□□ -2.53
LEMD3-206ENST00000545026 ANKRD36CQ5JPF3 1778 aa-0.74□□□□□ -2.53
LEMD3-206ENST00000545026 MT1HP80294 61 aa-0.74□□□□□ -2.53
LEMD3-206ENST00000545026 Q9H521 79 aa-0.74□□□□□ -2.53
LEMD3-206ENST00000545026 CFAP43Q8NDM7 1665 aa-0.75□□□□□ -2.53
LEMD3-206ENST00000545026 LINC00158P58513 81 aa-0.75□□□□□ -2.53
LEMD3-206ENST00000545026 PRLHP81277 87 aa-0.75□□□□□ -2.53
LEMD3-206ENST00000545026 S100A16Q96FQ6 103 aaKnown RBP-0.75□□□□□ -2.53
LEMD3-206ENST00000545026 FRYQ5TBA9 3013 aa-0.75□□□□□ -2.53
LEMD3-206ENST00000545026 TRIOO75962 3097 aa-0.75□□□□□ -2.53
LEMD3-206ENST00000545026 RANBP2P49792 3224 aaKnown RBP-0.75□□□□□ -2.53
LEMD3-206ENST00000545026 DNAH8Q96JB1 4490 aa-0.75□□□□□ -2.53
LEMD3-206ENST00000545026 H0YAA0 97 aa-0.76□□□□□ -2.53
LEMD3-206ENST00000545026 DEFB1P60022 68 aa-0.76□□□□□ -2.53
LEMD3-206ENST00000545026 DNAH7Q8WXX0 4024 aa-0.76□□□□□ -2.53
LEMD3-206ENST00000545026 PLCH1Q4KWH8 1693 aa-0.76□□□□□ -2.53
LEMD3-206ENST00000545026 UACAQ9BZF9 1416 aa-0.77□□□□□ -2.53
LEMD3-206ENST00000545026 MYO9AB2RTY4 2548 aa-0.77□□□□□ -2.53
LEMD3-206ENST00000545026 SPTAN1Q13813 2472 aaKnown RBP-0.77□□□□□ -2.53
LEMD3-206ENST00000545026 ITSN1Q15811 1721 aa-0.78□□□□□ -2.53
LEMD3-206ENST00000545026 CEP295Q9C0D2 2601 aa-0.78□□□□□ -2.53
LEMD3-206ENST00000545026 COL12A1Q99715 3063 aa-0.78□□□□□ -2.53
LEMD3-206ENST00000545026 LYNX1G3V0Z9 82 aa-0.78□□□□□ -2.53
LEMD3-206ENST00000545026 KRTAP19-5Q3LI72 72 aa-0.78□□□□□ -2.53
LEMD3-206ENST00000545026 ATP5EP2Q5VTU8 51 aa-0.78□□□□□ -2.53
LEMD3-206ENST00000545026 DEFB106AQ8N104 65 aa-0.78□□□□□ -2.53
LEMD3-206ENST00000545026 RB1CC1Q8TDY2 1594 aa-0.79□□□□□ -2.54
LEMD3-206ENST00000545026 PARP4Q9UKK3 1724 aaKnown RBP-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 409.9 ms