RNA–Protein interactions for RNA: ENST00000479155.1

LLGL1-202, Transcript of LLGL1, scribble cell polarity complex component, humanhuman

TSL 1 (best)

Gene LLGL1, Length 6,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LLGL1-202ENST00000479155 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
LLGL1-202ENST00000479155 R4GN34 69 aa8.68□□□□□ -1.02
LLGL1-202ENST00000479155 RANBP2P49792 3224 aaKnown RBP8.68□□□□□ -1.02
LLGL1-202ENST00000479155 KRTAP26-1Q6PEX3 210 aa8.68□□□□□ -1.02
LLGL1-202ENST00000479155 KRTAP10-1P60331 282 aa8.67□□□□□ -1.02
LLGL1-202ENST00000479155 FLNBO75369 2602 aaKnown RBP8.67□□□□□ -1.02
LLGL1-202ENST00000479155 Q5XG85 94 aa8.65□□□□□ -1.02
LLGL1-202ENST00000479155 CYSTM1Q9H1C7 97 aa8.65□□□□□ -1.02
LLGL1-202ENST00000479155 LCE6AA0A183 80 aa8.65□□□□□ -1.02
LLGL1-202ENST00000479155 KRTAP10-2P60368 255 aa8.64□□□□□ -1.03
LLGL1-202ENST00000479155 BRCA2P51587 3418 aa8.64□□□□□ -1.03
LLGL1-202ENST00000479155 MKI67P46013 3256 aaKnown RBP8.64□□□□□ -1.03
LLGL1-202ENST00000479155 Q5VV11 94 aa8.63□□□□□ -1.03
LLGL1-202ENST00000479155 FLNAP21333 2647 aaKnown RBP8.63□□□□□ -1.03
LLGL1-202ENST00000479155 FP248Q71RG6 208 aaPredicted RBP8.62□□□□□ -1.03
LLGL1-202ENST00000479155 PRAC1Q96KF2 57 aa8.61□□□□□ -1.03
LLGL1-202ENST00000479155 LAMA3Q16787 3333 aa8.61□□□□□ -1.03
LLGL1-202ENST00000479155 CFAP54Q96N23 3096 aa8.58□□□□□ -1.04
LLGL1-202ENST00000479155 TRANK1O15050 2925 aa8.58□□□□□ -1.04
LLGL1-202ENST00000479155 A0A0C4DFX4 3053 aa8.56□□□□□ -1.04
LLGL1-202ENST00000479155 ITPR3Q14573 2671 aa8.56□□□□□ -1.04
LLGL1-202ENST00000479155 M0QZ58 72 aa8.53□□□□□ -1.04
LLGL1-202ENST00000479155 RPL37P61927 97 aaKnown RBP8.53□□□□□ -1.04
LLGL1-202ENST00000479155 LAMA2P24043 3122 aaKnown RBP8.52□□□□□ -1.04
LLGL1-202ENST00000479155 H1FX-AS1Q4G0G2 97 aa8.51□□□□□ -1.05
LLGL1-202ENST00000479155 PANO1I0J062 215 aa8.5□□□□□ -1.05
LLGL1-202ENST00000479155 ROMO1P60602 79 aa8.5□□□□□ -1.05
LLGL1-202ENST00000479155 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
LLGL1-202ENST00000479155 ATRQ13535 2644 aa8.49□□□□□ -1.05
LLGL1-202ENST00000479155 Q6ZR54 194 aa8.49□□□□□ -1.05
LLGL1-202ENST00000479155 KRTAP4-16G5E9R7 235 aaPredicted RBP8.48□□□□□ -1.05
LLGL1-202ENST00000479155 CENPEQ02224 2701 aa8.46□□□□□ -1.06
LLGL1-202ENST00000479155 ADM2Q7Z4H4 148 aa8.45□□□□□ -1.06
LLGL1-202ENST00000479155 HELZ2Q9BYK8 2649 aaKnown RBP8.44□□□□□ -1.06
LLGL1-202ENST00000479155 A0A0A0MQY5 61 aa8.44□□□□□ -1.06
LLGL1-202ENST00000479155 OXTP01178 125 aa8.44□□□□□ -1.06
LLGL1-202ENST00000479155 MGAQ8IWI9 3026 aa8.44□□□□□ -1.06
LLGL1-202ENST00000479155 PRUNE2Q8WUY3 3088 aa8.43□□□□□ -1.06
LLGL1-202ENST00000479155 A0A087X002 238 aa8.42□□□□□ -1.06
LLGL1-202ENST00000479155 MAST4O15021 2626 aa8.42□□□□□ -1.06
LLGL1-202ENST00000479155 UNC80Q8N2C7 3258 aa8.42□□□□□ -1.06
LLGL1-202ENST00000479155 KRTAP29-1A8MX34 341 aaPredicted RBP8.4□□□□□ -1.06
LLGL1-202ENST00000479155 SPATA8Q6RVD6 105 aa8.39□□□□□ -1.07
LLGL1-202ENST00000479155 CFAP46Q8IYW2 2715 aa8.38□□□□□ -1.07
LLGL1-202ENST00000479155 WDFY4Q6ZS81 3184 aa8.38□□□□□ -1.07
LLGL1-202ENST00000479155 XIRP2A4UGR9 3374 aa8.37□□□□□ -1.07
LLGL1-202ENST00000479155 CDH23Q9H251 3354 aa8.35□□□□□ -1.07
LLGL1-202ENST00000479155 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
LLGL1-202ENST00000479155 H3BS24 57 aa8.32□□□□□ -1.08
LLGL1-202ENST00000479155 TRIOO75962 3097 aa8.31□□□□□ -1.08
LLGL1-202ENST00000479155 NOTCH2NLQ7Z3S9 236 aa8.31□□□□□ -1.08
LLGL1-202ENST00000479155 ASB16-AS1Q495Z4 193 aa8.28□□□□□ -1.08
LLGL1-202ENST00000479155 KRTAP11-1Q8IUC1 163 aa8.28□□□□□ -1.08
LLGL1-202ENST00000479155 RPS29P62273 56 aaKnown RBP8.28□□□□□ -1.08
LLGL1-202ENST00000479155 AKAP13Q12802 2813 aa8.27□□□□□ -1.08
LLGL1-202ENST00000479155 Q6ZRN7 208 aaPredicted RBP8.25□□□□□ -1.09
LLGL1-202ENST00000479155 CHD6Q8TD26 2715 aa8.25□□□□□ -1.09
LLGL1-202ENST00000479155 ZNF292O60281 2723 aa8.22□□□□□ -1.09
LLGL1-202ENST00000479155 VPS13AQ96RL7 3174 aa8.22□□□□□ -1.09
LLGL1-202ENST00000479155 STAB1Q9NY15 2570 aa8.22□□□□□ -1.09
LLGL1-202ENST00000479155 SZT2Q5T011 3432 aa8.19□□□□□ -1.1
LLGL1-202ENST00000479155 CELSR3Q9NYQ7 3312 aa8.18□□□□□ -1.1
LLGL1-202ENST00000479155 KRTAP7-1Q8IUC3 87 aa8.18□□□□□ -1.1
LLGL1-202ENST00000479155 A8MUU9 505 aa8.17□□□□□ -1.1
LLGL1-202ENST00000479155 MAP1AP78559 2803 aaPredicted RBP8.17□□□□□ -1.1
LLGL1-202ENST00000479155 KRTAP13-2Q52LG2 175 aa8.15□□□□□ -1.1
LLGL1-202ENST00000479155 SPTBN5Q9NRC6 3674 aaKnown RBP8.15□□□□□ -1.11
LLGL1-202ENST00000479155 TEX15Q9BXT5 2789 aa8.14□□□□□ -1.11
LLGL1-202ENST00000479155 DSPP15924 2871 aaKnown RBP8.14□□□□□ -1.11
LLGL1-202ENST00000479155 A8MU10 97 aa8.13□□□□□ -1.11
LLGL1-202ENST00000479155 TEP1Q99973 2627 aaKnown RBP8.12□□□□□ -1.11
LLGL1-202ENST00000479155 FRYQ5TBA9 3013 aa8.12□□□□□ -1.11
LLGL1-202ENST00000479155 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
LLGL1-202ENST00000479155 NBEAL1Q6ZS30 2694 aa8.11□□□□□ -1.11
LLGL1-202ENST00000479155 KRTAP13-1Q8IUC0 172 aa8.11□□□□□ -1.11
LLGL1-202ENST00000479155 DNAH14Q0VDD8 3507 aa8.1□□□□□ -1.11
LLGL1-202ENST00000479155 FREM2Q5SZK8 3169 aa8.09□□□□□ -1.11
LLGL1-202ENST00000479155 GCN1Q92616 2671 aaKnown RBP8.07□□□□□ -1.12
LLGL1-202ENST00000479155 KRTAP25-1Q3LHN0 102 aa8.05□□□□□ -1.12
LLGL1-202ENST00000479155 VCANP13611 3396 aa8.04□□□□□ -1.12
LLGL1-202ENST00000479155 LAMA1P25391 3075 aa8.03□□□□□ -1.12
LLGL1-202ENST00000479155 TNRC18O15417 2968 aaPredicted RBP8.02□□□□□ -1.13
LLGL1-202ENST00000479155 A6NN06 94 aa8.01□□□□□ -1.13
LLGL1-202ENST00000479155 DMBT1Q9UGM3 2413 aaPredicted RBP8.01□□□□□ -1.13
LLGL1-202ENST00000479155 NBEAL2Q6ZNJ1 2754 aa7.99□□□□□ -1.13
LLGL1-202ENST00000479155 UNC79Q9P2D8 2635 aa7.99□□□□□ -1.13
LLGL1-202ENST00000479155 SETXQ7Z333 2677 aaKnown RBP7.99□□□□□ -1.13
LLGL1-202ENST00000479155 COL6A5A8TX70 2615 aa7.97□□□□□ -1.13
LLGL1-202ENST00000479155 IGSF10Q6WRI0 2623 aa7.95□□□□□ -1.14
LLGL1-202ENST00000479155 NOTCH1P46531 2555 aa7.95□□□□□ -1.14
LLGL1-202ENST00000479155 KALRNO60229 2985 aa7.92□□□□□ -1.14
LLGL1-202ENST00000479155 REV3LO60673 3130 aa7.91□□□□□ -1.14
LLGL1-202ENST00000479155 TNP1P09430 55 aa7.9□□□□□ -1.15
LLGL1-202ENST00000479155 STAB2Q8WWQ8 2551 aa7.9□□□□□ -1.15
LLGL1-202ENST00000479155 KRTAP16-1A8MUX0 517 aa7.89□□□□□ -1.15
LLGL1-202ENST00000479155 UBR5O95071 2799 aaPredicted RBP7.89□□□□□ -1.15
LLGL1-202ENST00000479155 KRTAP21-3Q3LHN1 58 aa7.88□□□□□ -1.15
LLGL1-202ENST00000479155 NBEAQ8NFP9 2946 aa7.87□□□□□ -1.15
LLGL1-202ENST00000479155 BOD1L1Q8NFC6 3051 aa7.86□□□□□ -1.15
LLGL1-202ENST00000479155 COL6A3P12111 3177 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms