RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZFYVE26Q68DK2 2539 aa0.96□□□□□ -2.26
SMARCA1-204ENST00000478420 TLN1Q9Y490 2541 aaKnown RBP0.96□□□□□ -2.26
SMARCA1-204ENST00000478420 CELSR3Q9NYQ7 3312 aa0.96□□□□□ -2.26
SMARCA1-204ENST00000478420 ATRQ13535 2644 aa0.96□□□□□ -2.26
SMARCA1-204ENST00000478420 KNL1Q8NG31 2342 aa0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 EFCAB6Q5THR3 1501 aa0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 CEP250Q9BV73 2442 aa0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 ITSN2Q9NZM3 1697 aa0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 SYNE2Q8WXH0 6885 aaKnown RBP0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 NBEAL2Q6ZNJ1 2754 aa0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 PRXQ9BXM0 1461 aa0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 FANCD2Q9BXW9 1451 aa0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 ASPMQ8IZT6 3477 aa0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 I3L3M4 83 aa0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 PCNX1Q96RV3 2341 aa0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 CREBBPQ92793 2442 aa0.95□□□□□ -2.26
SMARCA1-204ENST00000478420 ABCC6O95255 1503 aa0.94□□□□□ -2.26
SMARCA1-204ENST00000478420 MUC2Q02817 5179 aa0.94□□□□□ -2.26
SMARCA1-204ENST00000478420 MRPL34Q9BQ48 92 aaKnown RBP0.94□□□□□ -2.26
SMARCA1-204ENST00000478420 VWFP04275 2813 aa0.94□□□□□ -2.26
SMARCA1-204ENST00000478420 MAP1BP46821 2468 aaKnown RBP0.94□□□□□ -2.26
SMARCA1-204ENST00000478420 WNK2Q9Y3S1 2297 aa0.94□□□□□ -2.26
SMARCA1-204ENST00000478420 ANKRD36CQ5JPF3 1778 aa0.93□□□□□ -2.26
SMARCA1-204ENST00000478420 ADCY10Q96PN6 1610 aa0.93□□□□□ -2.26
SMARCA1-204ENST00000478420 FLNAP21333 2647 aaKnown RBP0.93□□□□□ -2.26
SMARCA1-204ENST00000478420 LAMA3Q16787 3333 aa0.93□□□□□ -2.26
SMARCA1-204ENST00000478420 MAST1Q9Y2H9 1570 aa0.93□□□□□ -2.26
SMARCA1-204ENST00000478420 NCOR1O75376 2440 aa0.93□□□□□ -2.26
SMARCA1-204ENST00000478420 SPEGQ15772 3267 aa0.93□□□□□ -2.26
SMARCA1-204ENST00000478420 HTTP42858 3142 aa0.93□□□□□ -2.26
SMARCA1-204ENST00000478420 USP34Q70CQ2 3546 aa0.92□□□□□ -2.26
SMARCA1-204ENST00000478420 SNRPGP15A8MWD9 76 aa0.92□□□□□ -2.26
SMARCA1-204ENST00000478420 UBL5Q9BZL1 73 aa0.92□□□□□ -2.26
SMARCA1-204ENST00000478420 TJP1Q07157 1748 aa0.92□□□□□ -2.26
SMARCA1-204ENST00000478420 PKD1L1Q8TDX9 2849 aa0.92□□□□□ -2.26
SMARCA1-204ENST00000478420 CHD9Q3L8U1 2897 aa0.91□□□□□ -2.26
SMARCA1-204ENST00000478420 MROH2AA6NES4 1674 aa0.91□□□□□ -2.26
SMARCA1-204ENST00000478420 PRUNE2Q8WUY3 3088 aa0.91□□□□□ -2.26
SMARCA1-204ENST00000478420 USP9YO00507 2555 aaPredicted RBP0.91□□□□□ -2.26
SMARCA1-204ENST00000478420 DCHS1Q96JQ0 3298 aa0.91□□□□□ -2.26
SMARCA1-204ENST00000478420 COX6B1P14854 86 aa0.91□□□□□ -2.26
SMARCA1-204ENST00000478420 SPRR1AP35321 89 aa0.91□□□□□ -2.26
SMARCA1-204ENST00000478420 PRO3102Q9H379 93 aa0.91□□□□□ -2.26
SMARCA1-204ENST00000478420 KCNQ1DNQ9H478 68 aa0.91□□□□□ -2.26
SMARCA1-204ENST00000478420 FSIP2Q5CZC0 6907 aa0.91□□□□□ -2.26
SMARCA1-204ENST00000478420 AKAP6Q13023 2319 aa0.9□□□□□ -2.26
SMARCA1-204ENST00000478420 WDR87Q6ZQQ6 2873 aa0.9□□□□□ -2.26
SMARCA1-204ENST00000478420 ITPR1Q14643 2758 aa0.9□□□□□ -2.27
SMARCA1-204ENST00000478420 Q5VSD8 79 aa0.9□□□□□ -2.27
SMARCA1-204ENST00000478420 FXYD6Q9H0Q3 95 aa0.9□□□□□ -2.27
SMARCA1-204ENST00000478420 XIRP2A4UGR9 3374 aa0.9□□□□□ -2.27
SMARCA1-204ENST00000478420 CDH23Q9H251 3354 aa0.9□□□□□ -2.27
SMARCA1-204ENST00000478420 CROCC2H7BZ55 1655 aa0.9□□□□□ -2.27
SMARCA1-204ENST00000478420 NF1P21359 2839 aa0.9□□□□□ -2.27
SMARCA1-204ENST00000478420 RYR3Q15413 4870 aa0.9□□□□□ -2.27
SMARCA1-204ENST00000478420 TENM4Q6N022 2769 aa0.9□□□□□ -2.27
SMARCA1-204ENST00000478420 LY75O60449 1722 aa0.89□□□□□ -2.27
SMARCA1-204ENST00000478420 RYR1P21817 5038 aa0.89□□□□□ -2.27
SMARCA1-204ENST00000478420 LELP1Q5T871 98 aa0.89□□□□□ -2.27
SMARCA1-204ENST00000478420 KIAA1109Q2LD37 5005 aa0.89□□□□□ -2.27
SMARCA1-204ENST00000478420 RIF1Q5UIP0 2472 aaKnown RBP0.89□□□□□ -2.27
SMARCA1-204ENST00000478420 RELNP78509 3460 aa0.88□□□□□ -2.27
SMARCA1-204ENST00000478420 VPS13AQ96RL7 3174 aa0.88□□□□□ -2.27
SMARCA1-204ENST00000478420 TNRC6CQ9HCJ0 1690 aaKnown RBP0.88□□□□□ -2.27
SMARCA1-204ENST00000478420 ABCC8Q09428 1581 aa0.88□□□□□ -2.27
SMARCA1-204ENST00000478420 FRYQ5TBA9 3013 aa0.88□□□□□ -2.27
SMARCA1-204ENST00000478420 SPRR1BP22528 89 aa0.88□□□□□ -2.27
SMARCA1-204ENST00000478420 FCER1GP30273 86 aa0.88□□□□□ -2.27
SMARCA1-204ENST00000478420 DDX60LQ5H9U9 1706 aaKnown RBP0.88□□□□□ -2.27
SMARCA1-204ENST00000478420 DSPP15924 2871 aaKnown RBP0.88□□□□□ -2.27
SMARCA1-204ENST00000478420 PDZD2O15018 2839 aa0.88□□□□□ -2.27
SMARCA1-204ENST00000478420 BOD1L1Q8NFC6 3051 aa0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 SMG1Q96Q15 3661 aaKnown RBP0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 TLN2Q9Y4G6 2542 aa0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 BIRC6Q9NR09 4857 aa0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 CCL22O00626 93 aa0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 NDUFA3O95167 84 aa0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 COX6B2Q6YFQ2 88 aa0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 FAM186AA6NE01 2351 aa0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 SYCP2Q9BX26 1530 aa0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 UTP20O75691 2785 aaKnown RBP0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 MROH2BQ7Z745 1585 aa0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 LOC400499M0QZD8 3231 aa0.87□□□□□ -2.27
SMARCA1-204ENST00000478420 AKAP13Q12802 2813 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 CSPG4Q6UVK1 2322 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 IGF2RP11717 2491 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 DEFB131BA0A096LNP1 70 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 ETDCA0A1B0GVM5 59 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 K7EMI3 77 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 DEFB114Q30KQ6 69 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 H1FX-AS1Q4G0G2 97 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 NCBP2-AS2Q69YL0 99 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 NMES1Q9C002 83 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 APLNQ9ULZ1 77 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 CELSR2Q9HCU4 2923 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 UGGT1Q9NYU2 1555 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 MDN1Q9NU22 5596 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 ZZEF1O43149 2961 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 CRYBG3Q68DQ2 2970 aa0.86□□□□□ -2.27
SMARCA1-204ENST00000478420 CSMD1Q96PZ7 3565 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms