RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 VPS13BQ7Z7G8 4022 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 MTORP42345 2549 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 EPRSP07814 1512 aaKnown RBP-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 DNAH11Q96DT5 4516 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 ATP10BO94823 1461 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 ANK3Q12955 4377 aaKnown RBP-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 A0A1B0GUT8 65 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 H0YGG7 62 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 HMGN2P05204 90 aaKnown RBP-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 PKIAP61925 76 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 PEA15Q15121 130 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 KRTAP19-6Q3LI70 58 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 HTTP42858 3142 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 A0A0C4DFX4 3053 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 APOBP04114 4563 aaKnown RBP-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 LAMA1P25391 3075 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 KALRNO60229 2985 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 ITPR3Q14573 2671 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 NWD1Q149M9 1564 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 FANCAO15360 1455 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 ATP7BP35670 1465 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 NCOA2Q15596 1464 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 LRRC9Q6ZRR7 1453 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 ACYP1P07311 99 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 PLGLAQ15195 96 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 HMGN3Q15651 99 aa-0.19□□□□□ -2.44
PTPN22-203ENST00000460620 PIK3C2BO00750 1634 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 KIF14Q15058 1648 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 MYO15AQ9UKN7 3530 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 MYMXA0A1B0GTQ4 84 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 K7EP34 96 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 GYPAP02724 150 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 LINC00158P58513 81 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 TDRG1Q3Y452 100 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 SPRR2FQ96RM1 72 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 PRO3102Q9H379 93 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 Q9H521 79 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 CFAP43Q8NDM7 1665 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 NIPBLQ6KC79 2804 aaeCLIP-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 DNAH7Q8WXX0 4024 aa-0.2□□□□□ -2.44
PTPN22-203ENST00000460620 CEP162Q5TB80 1403 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 VPS8Q8N3P4 1428 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 ITSN1Q15811 1721 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 H0YAA0 97 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 CYB5AP00167 134 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 S100A8P05109 93 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 SMIM11AP58511 58 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 S100A16Q96FQ6 103 aaKnown RBP-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 ITPR2Q14571 2701 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 PLXNC1O60486 1568 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 DIP2BQ9P265 1576 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 CCNB3Q8WWL7 1395 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 MAP3K4Q9Y6R4 1608 aa-0.21□□□□□ -2.44
PTPN22-203ENST00000460620 TTC37Q6PGP7 1564 aa-0.22□□□□□ -2.44
PTPN22-203ENST00000460620 CEBPZOSA8MTT3 80 aa-0.22□□□□□ -2.44
PTPN22-203ENST00000460620 MT1AP04731 61 aa-0.22□□□□□ -2.44
PTPN22-203ENST00000460620 IFI6P09912 130 aa-0.22□□□□□ -2.44
PTPN22-203ENST00000460620 NRAPQ86VF7 1730 aa-0.22□□□□□ -2.44
PTPN22-203ENST00000460620 PARP4Q9UKK3 1724 aaKnown RBP-0.22□□□□□ -2.44
PTPN22-203ENST00000460620 UTP20O75691 2785 aaKnown RBP-0.22□□□□□ -2.44
PTPN22-203ENST00000460620 ANKRD50Q9ULJ7 1429 aa-0.22□□□□□ -2.44
PTPN22-203ENST00000460620 WIZO95785 1651 aa-0.22□□□□□ -2.44
PTPN22-203ENST00000460620 PLIN4Q96Q06 1357 aa-0.22□□□□□ -2.44
PTPN22-203ENST00000460620 DNAH2Q9P225 4427 aa-0.22□□□□□ -2.44
PTPN22-203ENST00000460620 MAP3K1Q13233 1512 aa-0.22□□□□□ -2.45
PTPN22-203ENST00000460620 NBEAQ8NFP9 2946 aa-0.22□□□□□ -2.45
PTPN22-203ENST00000460620 NDUFA4O00483 81 aa-0.22□□□□□ -2.45
PTPN22-203ENST00000460620 DEFB130BP0DP73 79 aa-0.22□□□□□ -2.45
PTPN22-203ENST00000460620 DEFB130AP0DP74 79 aa-0.22□□□□□ -2.45
PTPN22-203ENST00000460620 SNRPFP62306 86 aaKnown RBP-0.22□□□□□ -2.45
PTPN22-203ENST00000460620 RPL38P63173 70 aaKnown RBP-0.22□□□□□ -2.45
PTPN22-203ENST00000460620 PYY3Q5JQD4 70 aa-0.22□□□□□ -2.45
PTPN22-203ENST00000460620 LINC00643Q86TS7 51 aa-0.22□□□□□ -2.45
PTPN22-203ENST00000460620 S4R3F8 94 aa-0.22□□□□□ -2.45
PTPN22-203ENST00000460620 DNAH1Q9P2D7 4330 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 TEX15Q9BXT5 2789 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 ABCC3O15438 1527 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 SACSQ9NZJ4 4579 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 TLN2Q9Y4G6 2542 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 CSMD2Q7Z408 3487 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 UMAD1C9J7I0 102 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 C3orf79P0CE67 100 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 IAPPP10997 89 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 NREPQ16612 68 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 DEFB110Q30KQ9 67 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 COX6B2Q6YFQ2 88 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 DEFB106AQ8N104 65 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 RABAC1Q9UI14 185 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 V9GYS6 101 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 SPENQ96T58 3664 aaKnown RBP-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 CFAP46Q8IYW2 2715 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 CHD7Q9P2D1 2997 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 URB2Q14146 1524 aaKnown RBP-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 MAGI3Q5TCQ9 1506 aa-0.23□□□□□ -2.45
PTPN22-203ENST00000460620 ZC3H13Q5T200 1668 aaKnown RBP-0.24□□□□□ -2.45
PTPN22-203ENST00000460620 DNAH8Q96JB1 4490 aa-0.24□□□□□ -2.45
PTPN22-203ENST00000460620 RANBP2P49792 3224 aaKnown RBP-0.24□□□□□ -2.45
PTPN22-203ENST00000460620 WDFY4Q6ZS81 3184 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms