RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
PTPN22-203ENST00000460620 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
PTPN22-203ENST00000460620 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
PTPN22-203ENST00000460620 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
PTPN22-203ENST00000460620 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
PTPN22-203ENST00000460620 FOXD1Q16676 465 aa16.62■□□□□ 0.25
PTPN22-203ENST00000460620 MSH5O43196 834 aa16.43■□□□□ 0.22
PTPN22-203ENST00000460620 PIAS4Q8N2W9 510 aaPredicted RBP15.18■□□□□ 0.02
PTPN22-203ENST00000460620 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
PTPN22-203ENST00000460620 POTEHQ6S545 545 aa14.38□□□□□ -0.11
PTPN22-203ENST00000460620 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
PTPN22-203ENST00000460620 ADRA2BP18089 450 aa14.01□□□□□ -0.17
PTPN22-203ENST00000460620 DMRT2Q9Y5R5 561 aa13.81□□□□□ -0.2
PTPN22-203ENST00000460620 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
PTPN22-203ENST00000460620 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
PTPN22-203ENST00000460620 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
PTPN22-203ENST00000460620 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
PTPN22-203ENST00000460620 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
PTPN22-203ENST00000460620 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
PTPN22-203ENST00000460620 SP7Q8TDD2 431 aaPredicted RBP12.71□□□□□ -0.37
PTPN22-203ENST00000460620 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.38
PTPN22-203ENST00000460620 HOXD11P31277 338 aaPredicted RBP12.64□□□□□ -0.39
PTPN22-203ENST00000460620 PLSCR2Q9NRY7 297 aa12.53□□□□□ -0.4
PTPN22-203ENST00000460620 DSG3P32926 999 aa12.26□□□□□ -0.45
PTPN22-203ENST00000460620 CHRDL2Q6WN34 429 aa12.2□□□□□ -0.46
PTPN22-203ENST00000460620 RNF216Q9NWF9 866 aaPredicted RBP12.11□□□□□ -0.47
PTPN22-203ENST00000460620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPN22-203ENST00000460620 CAPN15O75808 1086 aa11.96□□□□□ -0.49
PTPN22-203ENST00000460620 RBM42Q9BTD8 480 aaKnown RBP11.95□□□□□ -0.5
PTPN22-203ENST00000460620 LHX8Q68G74 356 aa11.89□□□□□ -0.51
PTPN22-203ENST00000460620 HAX1O00165 279 aa11.78□□□□□ -0.52
PTPN22-203ENST00000460620 CNKSR2Q8WXI2 1034 aa11.78□□□□□ -0.52
PTPN22-203ENST00000460620 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.52
PTPN22-203ENST00000460620 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
PTPN22-203ENST00000460620 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
PTPN22-203ENST00000460620 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
PTPN22-203ENST00000460620 ABCB7O75027 752 aa11.44□□□□□ -0.58
PTPN22-203ENST00000460620 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
PTPN22-203ENST00000460620 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
PTPN22-203ENST00000460620 APLP2Q06481 763 aa11.34□□□□□ -0.59
PTPN22-203ENST00000460620 EVX2Q03828 476 aa11.33□□□□□ -0.6
PTPN22-203ENST00000460620 TRHP20396 242 aaPredicted RBP11.31□□□□□ -0.6
PTPN22-203ENST00000460620 POTEMA6NI47 508 aa11.26□□□□□ -0.61
PTPN22-203ENST00000460620 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
PTPN22-203ENST00000460620 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.62
PTPN22-203ENST00000460620 POTEGQ6S5H5 508 aa11.17□□□□□ -0.62
PTPN22-203ENST00000460620 GABBR2O75899 941 aa11.13□□□□□ -0.63
PTPN22-203ENST00000460620 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
PTPN22-203ENST00000460620 C19orf67A6NJJ6 358 aa10.93□□□□□ -0.66
PTPN22-203ENST00000460620 PITPNM1O00562 1244 aa10.92□□□□□ -0.66
PTPN22-203ENST00000460620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
PTPN22-203ENST00000460620 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
PTPN22-203ENST00000460620 POTEIP0CG38 1075 aa10.8□□□□□ -0.68
PTPN22-203ENST00000460620 OTUD5Q96G74 571 aa10.75□□□□□ -0.69
PTPN22-203ENST00000460620 NCBP3Q53F19 620 aaKnown RBP10.73□□□□□ -0.69
PTPN22-203ENST00000460620 CLCN6P51797 869 aa10.66□□□□□ -0.7
PTPN22-203ENST00000460620 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
PTPN22-203ENST00000460620 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
PTPN22-203ENST00000460620 POLA2Q14181 598 aa10.62□□□□□ -0.71
PTPN22-203ENST00000460620 DCBLD2Q96PD2 775 aa10.56□□□□□ -0.72
PTPN22-203ENST00000460620 ZBTB12Q9Y330 459 aaPredicted RBP10.52□□□□□ -0.72
PTPN22-203ENST00000460620 LCE2DQ5TA82 110 aaPredicted RBP10.38□□□□□ -0.75
PTPN22-203ENST00000460620 NPM3O75607 178 aaKnown RBP10.37□□□□□ -0.75
PTPN22-203ENST00000460620 CDAN1Q8IWY9 1227 aa10.37□□□□□ -0.75
PTPN22-203ENST00000460620 POTEB2H3BUK9 544 aa10.35□□□□□ -0.75
PTPN22-203ENST00000460620 OSCARQ8IYS5 282 aa10.34□□□□□ -0.75
PTPN22-203ENST00000460620 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
PTPN22-203ENST00000460620 MMRN1Q13201 1228 aa10.31□□□□□ -0.76
PTPN22-203ENST00000460620 SLC4A2P04920 1241 aa10.29□□□□□ -0.76
PTPN22-203ENST00000460620 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
PTPN22-203ENST00000460620 CD44P16070 742 aaKnown RBP10.21□□□□□ -0.77
PTPN22-203ENST00000460620 SPDYE1Q8NFV5 336 aaPredicted RBP10.21□□□□□ -0.78
PTPN22-203ENST00000460620 SPNS2Q8IVW8 549 aa10.14□□□□□ -0.79
PTPN22-203ENST00000460620 CLEC11AQ9Y240 323 aa10.14□□□□□ -0.79
PTPN22-203ENST00000460620 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
PTPN22-203ENST00000460620 ZNF579Q8NAF0 562 aaKnown RBP10.04□□□□□ -0.8
PTPN22-203ENST00000460620 CHADLQ6NUI6 762 aa10.03□□□□□ -0.8
PTPN22-203ENST00000460620 SPDYE2BA6NHP3 402 aa9.96□□□□□ -0.82
PTPN22-203ENST00000460620 SPDYE6P0CI01 402 aa9.96□□□□□ -0.82
PTPN22-203ENST00000460620 SPDYE2Q495Y8 402 aa9.96□□□□□ -0.82
PTPN22-203ENST00000460620 POTEJP0CG39 1038 aa9.92□□□□□ -0.82
PTPN22-203ENST00000460620 METRNQ9UJH8 293 aa9.89□□□□□ -0.83
PTPN22-203ENST00000460620 GALR2O43603 387 aaPredicted RBP9.88□□□□□ -0.83
PTPN22-203ENST00000460620 C7P10643 843 aa9.88□□□□□ -0.83
PTPN22-203ENST00000460620 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
PTPN22-203ENST00000460620 FARP1Q9Y4F1 1045 aaPredicted RBP9.84□□□□□ -0.83
PTPN22-203ENST00000460620 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
PTPN22-203ENST00000460620 ZRANB1Q9UGI0 708 aa9.8□□□□□ -0.84
PTPN22-203ENST00000460620 PRR29P0C7W0 189 aa9.8□□□□□ -0.84
PTPN22-203ENST00000460620 MYCNP04198 464 aaPredicted RBP9.76□□□□□ -0.85
PTPN22-203ENST00000460620 ST18O60284 1047 aa9.68□□□□□ -0.86
PTPN22-203ENST00000460620 ASTLQ6HA08 431 aaPredicted RBP9.67□□□□□ -0.86
PTPN22-203ENST00000460620 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
PTPN22-203ENST00000460620 ATMINO43313 823 aaPredicted RBP9.58□□□□□ -0.88
PTPN22-203ENST00000460620 SSUH2Q9Y2M2 353 aa9.57□□□□□ -0.88
PTPN22-203ENST00000460620 PAK3O75914 559 aaPredicted RBP9.5□□□□□ -0.89
PTPN22-203ENST00000460620 ZNF692Q9BU19 519 aaPredicted RBP9.47□□□□□ -0.89
PTPN22-203ENST00000460620 ATF5Q9Y2D1 282 aaPredicted RBP9.47□□□□□ -0.89
PTPN22-203ENST00000460620 FBLN2P98095 1184 aa9.47□□□□□ -0.89
PTPN22-203ENST00000460620 PHF12Q96QT6 1004 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms