RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 HTTP42858 3142 aa-0.74□□□□□ -2.53
RNU2-28P-201ENST00000410457 LYSTQ99698 3801 aa-0.74□□□□□ -2.53
RNU2-28P-201ENST00000410457 PCLOQ9Y6V0 5065 aa-0.74□□□□□ -2.53
RNU2-28P-201ENST00000410457 TEP1Q99973 2627 aaKnown RBP-0.75□□□□□ -2.53
RNU2-28P-201ENST00000410457 LAMA5O15230 3695 aa-0.76□□□□□ -2.53
RNU2-28P-201ENST00000410457 HMGA1P17096 107 aaKnown RBP-0.76□□□□□ -2.53
RNU2-28P-201ENST00000410457 DEPDC5O75140 1603 aa-0.76□□□□□ -2.53
RNU2-28P-201ENST00000410457 KRTAP19-8Q3LI54 63 aa-0.77□□□□□ -2.53
RNU2-28P-201ENST00000410457 KMT2CQ8NEZ4 4911 aaKnown RBP-0.78□□□□□ -2.53
RNU2-28P-201ENST00000410457 DMXL1Q9Y485 3027 aa-0.78□□□□□ -2.53
RNU2-28P-201ENST00000410457 H0YAA0 97 aa-0.78□□□□□ -2.53
RNU2-28P-201ENST00000410457 NDUFA4O00483 81 aa-0.78□□□□□ -2.53
RNU2-28P-201ENST00000410457 NREPQ16612 68 aa-0.78□□□□□ -2.53
RNU2-28P-201ENST00000410457 ANKRD11Q6UB99 2663 aaPredicted RBP-0.78□□□□□ -2.53
RNU2-28P-201ENST00000410457 SCN11AQ9UI33 1791 aa-0.78□□□□□ -2.53
RNU2-28P-201ENST00000410457 MTORP42345 2549 aa-0.79□□□□□ -2.54
RNU2-28P-201ENST00000410457 DCAF1Q9Y4B6 1507 aa-0.79□□□□□ -2.54
RNU2-28P-201ENST00000410457 CUBNO60494 3623 aa-0.8□□□□□ -2.54
RNU2-28P-201ENST00000410457 A0A087WXM4 84 aa-0.8□□□□□ -2.54
RNU2-28P-201ENST00000410457 LYNX1G3V0Z9 82 aa-0.8□□□□□ -2.54
RNU2-28P-201ENST00000410457 MT1AP04731 61 aa-0.8□□□□□ -2.54
RNU2-28P-201ENST00000410457 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.8□□□□□ -2.54
RNU2-28P-201ENST00000410457 CEP290O15078 2479 aa-0.8□□□□□ -2.54
RNU2-28P-201ENST00000410457 CCDC18Q5T9S5 1454 aa-0.8□□□□□ -2.54
RNU2-28P-201ENST00000410457 DDX60LQ5H9U9 1706 aaKnown RBP-0.81□□□□□ -2.54
RNU2-28P-201ENST00000410457 LRRK2Q5S007 2527 aa-0.81□□□□□ -2.54
RNU2-28P-201ENST00000410457 NBPF19A0A087WUL8 3843 aa-0.81□□□□□ -2.54
RNU2-28P-201ENST00000410457 C9orf92A6NGG3 77 aa-0.81□□□□□ -2.54
RNU2-28P-201ENST00000410457 H3BUT2 72 aa-0.81□□□□□ -2.54
RNU2-28P-201ENST00000410457 ABCC1P33527 1531 aa-0.81□□□□□ -2.54
RNU2-28P-201ENST00000410457 ERVK-7P63135 1459 aa-0.81□□□□□ -2.54
RNU2-28P-201ENST00000410457 PKD1L2Q7Z442 2459 aa-0.81□□□□□ -2.54
RNU2-28P-201ENST00000410457 HERC1Q15751 4861 aa-0.82□□□□□ -2.54
RNU2-28P-201ENST00000410457 SMIM13P0DJ93 91 aa-0.82□□□□□ -2.54
RNU2-28P-201ENST00000410457 DNAH9Q9NYC9 4486 aa-0.82□□□□□ -2.54
RNU2-28P-201ENST00000410457 PLCH1Q4KWH8 1693 aa-0.82□□□□□ -2.54
RNU2-28P-201ENST00000410457 NEBP20929 6669 aa-0.82□□□□□ -2.54
RNU2-28P-201ENST00000410457 DNAH6Q9C0G6 4158 aa-0.82□□□□□ -2.54
RNU2-28P-201ENST00000410457 GCN1Q92616 2671 aaKnown RBP-0.82□□□□□ -2.54
RNU2-28P-201ENST00000410457 KDM5DQ9BY66 1539 aa-0.83□□□□□ -2.54
RNU2-28P-201ENST00000410457 CFAP43Q8NDM7 1665 aa-0.83□□□□□ -2.54
RNU2-28P-201ENST00000410457 H3BNG1 76 aa-0.83□□□□□ -2.54
RNU2-28P-201ENST00000410457 SPRR2FQ96RM1 72 aa-0.83□□□□□ -2.54
RNU2-28P-201ENST00000410457 FAM186AA6NE01 2351 aa-0.84□□□□□ -2.54
RNU2-28P-201ENST00000410457 BVES-AS1Q5T3Y7 98 aa-0.84□□□□□ -2.54
RNU2-28P-201ENST00000410457 DEFA5Q01523 94 aa-0.85□□□□□ -2.55
RNU2-28P-201ENST00000410457 AKAP9Q99996 3911 aa-0.85□□□□□ -2.55
RNU2-28P-201ENST00000410457 FAT3Q8TDW7 4589 aa-0.86□□□□□ -2.55
RNU2-28P-201ENST00000410457 ACACAQ13085 2346 aa-0.86□□□□□ -2.55
RNU2-28P-201ENST00000410457 CFAP74Q9C0B2 1584 aa-0.87□□□□□ -2.55
RNU2-28P-201ENST00000410457 DEFB131BA0A096LNP1 70 aa-0.87□□□□□ -2.55
RNU2-28P-201ENST00000410457 PRLHP81277 87 aa-0.87□□□□□ -2.55
RNU2-28P-201ENST00000410457 ANKRD50Q9ULJ7 1429 aa-0.88□□□□□ -2.55
RNU2-28P-201ENST00000410457 ITPR3Q14573 2671 aa-0.88□□□□□ -2.55
RNU2-28P-201ENST00000410457 UTP20O75691 2785 aaKnown RBP-0.88□□□□□ -2.55
RNU2-28P-201ENST00000410457 RICTORQ6R327 1708 aa-0.88□□□□□ -2.55
RNU2-28P-201ENST00000410457 DEFB130BP0DP73 79 aa-0.88□□□□□ -2.55
RNU2-28P-201ENST00000410457 DEFB130AP0DP74 79 aa-0.88□□□□□ -2.55
RNU2-28P-201ENST00000410457 MYO18BQ8IUG5 2567 aa-0.88□□□□□ -2.55
RNU2-28P-201ENST00000410457 ARHGAP35Q9NRY4 1499 aa-0.88□□□□□ -2.55
RNU2-28P-201ENST00000410457 THOC2Q8NI27 1593 aaKnown RBP-0.89□□□□□ -2.55
RNU2-28P-201ENST00000410457 ITSN1Q15811 1721 aa-0.89□□□□□ -2.55
RNU2-28P-201ENST00000410457 CD163L1Q9NR16 1453 aa-0.9□□□□□ -2.55
RNU2-28P-201ENST00000410457 MRPL33O75394 65 aaKnown RBP-0.9□□□□□ -2.55
RNU2-28P-201ENST00000410457 IAPPP10997 89 aa-0.9□□□□□ -2.55
RNU2-28P-201ENST00000410457 C18orf32Q8TCD1 76 aa-0.9□□□□□ -2.55
RNU2-28P-201ENST00000410457 NBEAQ8NFP9 2946 aa-0.91□□□□□ -2.55
RNU2-28P-201ENST00000410457 KALRNO60229 2985 aa-0.91□□□□□ -2.55
RNU2-28P-201ENST00000410457 VPS13DQ5THJ4 4388 aa-0.91□□□□□ -2.56
RNU2-28P-201ENST00000410457 MAP3K1Q13233 1512 aa-0.92□□□□□ -2.56
RNU2-28P-201ENST00000410457 KCNQ1DNQ9H478 68 aa-0.92□□□□□ -2.56
RNU2-28P-201ENST00000410457 FAT1Q14517 4588 aa-0.92□□□□□ -2.56
RNU2-28P-201ENST00000410457 TJP1Q07157 1748 aa-0.92□□□□□ -2.56
RNU2-28P-201ENST00000410457 DNAH3Q8TD57 4116 aa-0.93□□□□□ -2.56
RNU2-28P-201ENST00000410457 LAMA1P25391 3075 aa-0.93□□□□□ -2.56
RNU2-28P-201ENST00000410457 USP9YO00507 2555 aaPredicted RBP-0.93□□□□□ -2.56
RNU2-28P-201ENST00000410457 STARD9Q9P2P6 4700 aa-0.94□□□□□ -2.56
RNU2-28P-201ENST00000410457 HFM1A2PYH4 1435 aa-0.94□□□□□ -2.56
RNU2-28P-201ENST00000410457 MGAM2Q2M2H8 2515 aa-0.94□□□□□ -2.56
RNU2-28P-201ENST00000410457 KRTAP20-2Q3LI61 65 aa-0.95□□□□□ -2.56
RNU2-28P-201ENST00000410457 RALGAPBQ86X10 1494 aa-0.95□□□□□ -2.56
RNU2-28P-201ENST00000410457 ZC3H13Q5T200 1668 aaKnown RBP-0.95□□□□□ -2.56
RNU2-28P-201ENST00000410457 VPS13BQ7Z7G8 4022 aa-0.96□□□□□ -2.56
RNU2-28P-201ENST00000410457 BPTFQ12830 3046 aa-0.96□□□□□ -2.56
RNU2-28P-201ENST00000410457 RNF17Q9BXT8 1623 aaKnown RBP-0.96□□□□□ -2.56
RNU2-28P-201ENST00000410457 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.96□□□□□ -2.56
RNU2-28P-201ENST00000410457 UBL5Q9BZL1 73 aa-0.96□□□□□ -2.56
RNU2-28P-201ENST00000410457 HERC2O95714 4834 aa-0.96□□□□□ -2.56
RNU2-28P-201ENST00000410457 CCDC168Q8NDH2 2452 aa-0.96□□□□□ -2.56
RNU2-28P-201ENST00000410457 ANKARQ7Z5J8 1434 aa-0.97□□□□□ -2.56
RNU2-28P-201ENST00000410457 RRBP1Q9P2E9 1410 aaKnown RBP-0.97□□□□□ -2.56
RNU2-28P-201ENST00000410457 ANK3Q12955 4377 aaKnown RBP-0.97□□□□□ -2.56
RNU2-28P-201ENST00000410457 NBEAL2Q6ZNJ1 2754 aa-0.98□□□□□ -2.57
RNU2-28P-201ENST00000410457 PKHD1L1Q86WI1 4243 aa-1□□□□□ -2.57
RNU2-28P-201ENST00000410457 CRIP1P50238 77 aa-1□□□□□ -2.57
RNU2-28P-201ENST00000410457 ABCA8O94911 1581 aa-1□□□□□ -2.57
RNU2-28P-201ENST00000410457 S4R3F8 94 aa-1.01□□□□□ -2.57
RNU2-28P-201ENST00000410457 LMTK2Q8IWU2 1503 aa-1.01□□□□□ -2.57
RNU2-28P-201ENST00000410457 KIAA0586Q9BVV6 1533 aa-1.01□□□□□ -2.57
RNU2-28P-201ENST00000410457 ACACBO00763 2458 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms