RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 Q75L30 129 aa10.61□□□□□ -0.71
NRXN1-209ENST00000405581 DMAC1Q96GE9 116 aa10.61□□□□□ -0.71
NRXN1-209ENST00000405581 LINC01558Q9Y6Z2 57 aa10.59□□□□□ -0.71
NRXN1-209ENST00000405581 FLG2Q5D862 2391 aaPredicted RBP10.58□□□□□ -0.72
NRXN1-209ENST00000405581 SEC61BP60468 96 aaKnown RBP10.58□□□□□ -0.72
NRXN1-209ENST00000405581 MGAQ8IWI9 3026 aa10.58□□□□□ -0.72
NRXN1-209ENST00000405581 S4R3F8 94 aa10.58□□□□□ -0.72
NRXN1-209ENST00000405581 Q8N9P0 234 aaPredicted RBP10.57□□□□□ -0.72
NRXN1-209ENST00000405581 LINC00472Q9H8W2 130 aa10.57□□□□□ -0.72
NRXN1-209ENST00000405581 Q5W150 140 aa10.53□□□□□ -0.72
NRXN1-209ENST00000405581 SPINK7P58062 85 aa10.52□□□□□ -0.73
NRXN1-209ENST00000405581 Q8NDZ9 215 aa10.52□□□□□ -0.73
NRXN1-209ENST00000405581 TEP1Q99973 2627 aaKnown RBP10.5□□□□□ -0.73
NRXN1-209ENST00000405581 LAMA3Q16787 3333 aa10.5□□□□□ -0.73
NRXN1-209ENST00000405581 LCE6AA0A183 80 aa10.48□□□□□ -0.73
NRXN1-209ENST00000405581 A0A0C4DFX4 3053 aa10.48□□□□□ -0.73
NRXN1-209ENST00000405581 AKAP13Q12802 2813 aa10.46□□□□□ -0.73
NRXN1-209ENST00000405581 R4GN34 69 aa10.46□□□□□ -0.74
NRXN1-209ENST00000405581 TEX15Q9BXT5 2789 aa10.46□□□□□ -0.74
NRXN1-209ENST00000405581 KRTAP1-5Q9BYS1 174 aa10.45□□□□□ -0.74
NRXN1-209ENST00000405581 CHD6Q8TD26 2715 aa10.44□□□□□ -0.74
NRXN1-209ENST00000405581 Q5VSD8 79 aa10.44□□□□□ -0.74
NRXN1-209ENST00000405581 SETXQ7Z333 2677 aaKnown RBP10.44□□□□□ -0.74
NRXN1-209ENST00000405581 KRTAP26-1Q6PEX3 210 aa10.43□□□□□ -0.74
NRXN1-209ENST00000405581 MKI67P46013 3256 aaKnown RBP10.43□□□□□ -0.74
NRXN1-209ENST00000405581 UNC79Q9P2D8 2635 aa10.42□□□□□ -0.74
NRXN1-209ENST00000405581 LAMA2P24043 3122 aaKnown RBP10.41□□□□□ -0.74
NRXN1-209ENST00000405581 NBEAL1Q6ZS30 2694 aa10.41□□□□□ -0.74
NRXN1-209ENST00000405581 COL6A5A8TX70 2615 aa10.41□□□□□ -0.74
NRXN1-209ENST00000405581 FP248Q71RG6 208 aaPredicted RBP10.39□□□□□ -0.75
NRXN1-209ENST00000405581 CFAP54Q96N23 3096 aa10.39□□□□□ -0.75
NRXN1-209ENST00000405581 IGSF10Q6WRI0 2623 aa10.37□□□□□ -0.75
NRXN1-209ENST00000405581 KRTAP10-1P60331 282 aa10.37□□□□□ -0.75
NRXN1-209ENST00000405581 DSPP15924 2871 aaKnown RBP10.36□□□□□ -0.75
NRXN1-209ENST00000405581 WDFY4Q6ZS81 3184 aa10.34□□□□□ -0.75
NRXN1-209ENST00000405581 RPL37P61927 97 aaKnown RBP10.3□□□□□ -0.76
NRXN1-209ENST00000405581 KRTAP10-2P60368 255 aa10.3□□□□□ -0.76
NRXN1-209ENST00000405581 Q5VV11 94 aa10.28□□□□□ -0.76
NRXN1-209ENST00000405581 BRCA2P51587 3418 aa10.28□□□□□ -0.76
NRXN1-209ENST00000405581 NOTCH1P46531 2555 aa10.27□□□□□ -0.76
NRXN1-209ENST00000405581 OXTP01178 125 aa10.27□□□□□ -0.77
NRXN1-209ENST00000405581 PRUNE2Q8WUY3 3088 aa10.26□□□□□ -0.77
NRXN1-209ENST00000405581 GCN1Q92616 2671 aaKnown RBP10.26□□□□□ -0.77
NRXN1-209ENST00000405581 Q5XG85 94 aa10.25□□□□□ -0.77
NRXN1-209ENST00000405581 Q6ZR54 194 aa10.24□□□□□ -0.77
NRXN1-209ENST00000405581 KRTAP4-16G5E9R7 235 aaPredicted RBP10.22□□□□□ -0.77
NRXN1-209ENST00000405581 DMBT1Q9UGM3 2413 aaPredicted RBP10.22□□□□□ -0.77
NRXN1-209ENST00000405581 M0QZ58 72 aa10.2□□□□□ -0.78
NRXN1-209ENST00000405581 A0A0A0MQY5 61 aa10.2□□□□□ -0.78
NRXN1-209ENST00000405581 BAHCC1Q9P281 2608 aa10.2□□□□□ -0.78
NRXN1-209ENST00000405581 CYSTM1Q9H1C7 97 aa10.18□□□□□ -0.78
NRXN1-209ENST00000405581 H1FX-AS1Q4G0G2 97 aa10.18□□□□□ -0.78
NRXN1-209ENST00000405581 ROMO1P60602 79 aa10.17□□□□□ -0.78
NRXN1-209ENST00000405581 PRAC1Q96KF2 57 aa10.16□□□□□ -0.78
NRXN1-209ENST00000405581 MAP1AP78559 2803 aaPredicted RBP10.16□□□□□ -0.78
NRXN1-209ENST00000405581 UBR5O95071 2799 aaPredicted RBP10.14□□□□□ -0.79
NRXN1-209ENST00000405581 KRTAP29-1A8MX34 341 aaPredicted RBP10.13□□□□□ -0.79
NRXN1-209ENST00000405581 PLAC4Q8WY50 150 aa10.12□□□□□ -0.79
NRXN1-209ENST00000405581 STAB2Q8WWQ8 2551 aa10.12□□□□□ -0.79
NRXN1-209ENST00000405581 TRIOO75962 3097 aa10.11□□□□□ -0.79
NRXN1-209ENST00000405581 PANO1I0J062 215 aa10.11□□□□□ -0.79
NRXN1-209ENST00000405581 RPS29P62273 56 aaKnown RBP10.11□□□□□ -0.79
NRXN1-209ENST00000405581 XIRP2A4UGR9 3374 aa10.1□□□□□ -0.79
NRXN1-209ENST00000405581 ASB16-AS1Q495Z4 193 aa10.09□□□□□ -0.79
NRXN1-209ENST00000405581 UNC80Q8N2C7 3258 aa10.09□□□□□ -0.79
NRXN1-209ENST00000405581 A0A087X002 238 aa10.07□□□□□ -0.8
NRXN1-209ENST00000405581 VPS13AQ96RL7 3174 aa10.06□□□□□ -0.8
NRXN1-209ENST00000405581 ADM2Q7Z4H4 148 aa10.04□□□□□ -0.8
NRXN1-209ENST00000405581 NBEAL2Q6ZNJ1 2754 aa10.03□□□□□ -0.8
NRXN1-209ENST00000405581 H3BS24 57 aa10.02□□□□□ -0.81
NRXN1-209ENST00000405581 ITPR2Q14571 2701 aa10□□□□□ -0.81
NRXN1-209ENST00000405581 FRYQ5TBA9 3013 aa10□□□□□ -0.81
NRXN1-209ENST00000405581 CDH23Q9H251 3354 aa9.99□□□□□ -0.81
NRXN1-209ENST00000405581 FLNCQ14315 2725 aa9.99□□□□□ -0.81
NRXN1-209ENST00000405581 NSD1Q96L73 2696 aaPredicted RBP9.98□□□□□ -0.81
NRXN1-209ENST00000405581 ITPR1Q14643 2758 aa9.96□□□□□ -0.82
NRXN1-209ENST00000405581 Q6ZRN7 208 aaPredicted RBP9.94□□□□□ -0.82
NRXN1-209ENST00000405581 SPATA8Q6RVD6 105 aa9.91□□□□□ -0.82
NRXN1-209ENST00000405581 NOTCH2NLQ7Z3S9 236 aa9.87□□□□□ -0.83
NRXN1-209ENST00000405581 VCANP13611 3396 aa9.86□□□□□ -0.83
NRXN1-209ENST00000405581 ATMQ13315 3056 aa9.82□□□□□ -0.84
NRXN1-209ENST00000405581 KRTAP11-1Q8IUC1 163 aa9.82□□□□□ -0.84
NRXN1-209ENST00000405581 KMT2BQ9UMN6 2715 aaPredicted RBP9.8□□□□□ -0.84
NRXN1-209ENST00000405581 A8MUU9 505 aa9.79□□□□□ -0.84
NRXN1-209ENST00000405581 DNAH14Q0VDD8 3507 aa9.79□□□□□ -0.84
NRXN1-209ENST00000405581 KRTAP21-3Q3LHN1 58 aa9.78□□□□□ -0.84
NRXN1-209ENST00000405581 FRYLO94915 3013 aa9.78□□□□□ -0.84
NRXN1-209ENST00000405581 KRTAP13-1Q8IUC0 172 aa9.78□□□□□ -0.84
NRXN1-209ENST00000405581 TACC2O95359 2948 aa9.78□□□□□ -0.84
NRXN1-209ENST00000405581 KRTAP13-2Q52LG2 175 aa9.77□□□□□ -0.85
NRXN1-209ENST00000405581 COL12A1Q99715 3063 aa9.76□□□□□ -0.85
NRXN1-209ENST00000405581 HIVEP1P15822 2718 aa9.75□□□□□ -0.85
NRXN1-209ENST00000405581 KRTAP7-1Q8IUC3 87 aa9.75□□□□□ -0.85
NRXN1-209ENST00000405581 SZT2Q5T011 3432 aa9.73□□□□□ -0.85
NRXN1-209ENST00000405581 SPEGQ15772 3267 aa9.73□□□□□ -0.85
NRXN1-209ENST00000405581 LAMA1P25391 3075 aa9.71□□□□□ -0.85
NRXN1-209ENST00000405581 UTP20O75691 2785 aaKnown RBP9.71□□□□□ -0.85
NRXN1-209ENST00000405581 KALRNO60229 2985 aa9.71□□□□□ -0.86
NRXN1-209ENST00000405581 C20orf166-AS1Q96NR2 134 aa9.69□□□□□ -0.86
NRXN1-209ENST00000405581 CELSR3Q9NYQ7 3312 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms