RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 C20orf166-AS1Q96NR2 134 aa6.91□□□□□ -1.3
HLCS-202ENST00000399120 Q6ZR54 194 aa6.9□□□□□ -1.3
HLCS-202ENST00000399120 SPTBN4Q9H254 2564 aa6.9□□□□□ -1.3
HLCS-202ENST00000399120 OXTP01178 125 aa6.87□□□□□ -1.31
HLCS-202ENST00000399120 PANO1I0J062 215 aa6.87□□□□□ -1.31
HLCS-202ENST00000399120 FASNP49327 2511 aaKnown RBP6.86□□□□□ -1.31
HLCS-202ENST00000399120 KRTAP10-1P60331 282 aa6.86□□□□□ -1.31
HLCS-202ENST00000399120 CEP295Q9C0D2 2601 aa6.85□□□□□ -1.31
HLCS-202ENST00000399120 USP24Q9UPU5 2620 aa6.85□□□□□ -1.31
HLCS-202ENST00000399120 KRTAP1-5Q9BYS1 174 aa6.81□□□□□ -1.32
HLCS-202ENST00000399120 KRTAP25-1Q3LHN0 102 aa6.8□□□□□ -1.32
HLCS-202ENST00000399120 LCE6AA0A183 80 aa6.8□□□□□ -1.32
HLCS-202ENST00000399120 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
HLCS-202ENST00000399120 MGAM2Q2M2H8 2515 aa6.78□□□□□ -1.32
HLCS-202ENST00000399120 A8MUU9 505 aa6.76□□□□□ -1.33
HLCS-202ENST00000399120 KRTAP29-1A8MX34 341 aaPredicted RBP6.74□□□□□ -1.33
HLCS-202ENST00000399120 A8MU10 97 aa6.73□□□□□ -1.33
HLCS-202ENST00000399120 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
HLCS-202ENST00000399120 A0A087X002 238 aa6.7□□□□□ -1.34
HLCS-202ENST00000399120 BPTFQ12830 3046 aa6.68□□□□□ -1.34
HLCS-202ENST00000399120 A6NN06 94 aa6.67□□□□□ -1.34
HLCS-202ENST00000399120 KRTAP4-16G5E9R7 235 aaPredicted RBP6.67□□□□□ -1.34
HLCS-202ENST00000399120 DNAH12Q6ZR08 3092 aa6.66□□□□□ -1.34
HLCS-202ENST00000399120 TNP1P09430 55 aa6.66□□□□□ -1.34
HLCS-202ENST00000399120 NOTCH2NLQ7Z3S9 236 aa6.65□□□□□ -1.34
HLCS-202ENST00000399120 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
HLCS-202ENST00000399120 UTRNP46939 3433 aa6.64□□□□□ -1.35
HLCS-202ENST00000399120 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
HLCS-202ENST00000399120 CENPFP49454 3210 aa6.61□□□□□ -1.35
HLCS-202ENST00000399120 DMBT1Q9UGM3 2413 aaPredicted RBP6.61□□□□□ -1.35
HLCS-202ENST00000399120 EPG5Q9HCE0 2579 aa6.59□□□□□ -1.35
HLCS-202ENST00000399120 CEP350Q5VT06 3117 aa6.57□□□□□ -1.36
HLCS-202ENST00000399120 HECTD1Q9ULT8 2610 aa6.54□□□□□ -1.36
HLCS-202ENST00000399120 HTTP42858 3142 aa6.5□□□□□ -1.37
HLCS-202ENST00000399120 ATRQ13535 2644 aa6.49□□□□□ -1.37
HLCS-202ENST00000399120 STAB1Q9NY15 2570 aa6.48□□□□□ -1.37
HLCS-202ENST00000399120 FLNBO75369 2602 aaKnown RBP6.47□□□□□ -1.37
HLCS-202ENST00000399120 KRTAP11-1Q8IUC1 163 aa6.47□□□□□ -1.37
HLCS-202ENST00000399120 MAST4O15021 2626 aa6.46□□□□□ -1.37
HLCS-202ENST00000399120 CHD7Q9P2D1 2997 aa6.46□□□□□ -1.38
HLCS-202ENST00000399120 FLNAP21333 2647 aaKnown RBP6.45□□□□□ -1.38
HLCS-202ENST00000399120 CHD9Q3L8U1 2897 aa6.45□□□□□ -1.38
HLCS-202ENST00000399120 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
HLCS-202ENST00000399120 KRTAP13-2Q52LG2 175 aa6.43□□□□□ -1.38
HLCS-202ENST00000399120 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
HLCS-202ENST00000399120 Q6ZRN7 208 aaPredicted RBP6.41□□□□□ -1.38
HLCS-202ENST00000399120 ITPR3Q14573 2671 aa6.41□□□□□ -1.38
HLCS-202ENST00000399120 NBEAL1Q6ZS30 2694 aa6.4□□□□□ -1.38
HLCS-202ENST00000399120 PCNTO95613 3336 aa6.39□□□□□ -1.39
HLCS-202ENST00000399120 TRANK1O15050 2925 aa6.36□□□□□ -1.39
HLCS-202ENST00000399120 CFAP46Q8IYW2 2715 aa6.35□□□□□ -1.39
HLCS-202ENST00000399120 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
HLCS-202ENST00000399120 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
HLCS-202ENST00000399120 STAB2Q8WWQ8 2551 aa6.33□□□□□ -1.4
HLCS-202ENST00000399120 C5orf42Q9H799 3197 aa6.27□□□□□ -1.41
HLCS-202ENST00000399120 HELZ2Q9BYK8 2649 aaKnown RBP6.27□□□□□ -1.41
HLCS-202ENST00000399120 A0A1B0GVY2 172 aa6.27□□□□□ -1.41
HLCS-202ENST00000399120 PRRC2CQ9Y520 2896 aaKnown RBP6.26□□□□□ -1.41
HLCS-202ENST00000399120 P0C880 135 aa6.26□□□□□ -1.41
HLCS-202ENST00000399120 AKAP13Q12802 2813 aa6.25□□□□□ -1.41
HLCS-202ENST00000399120 CENPEQ02224 2701 aa6.24□□□□□ -1.41
HLCS-202ENST00000399120 RANBP2P49792 3224 aaKnown RBP6.24□□□□□ -1.41
HLCS-202ENST00000399120 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.42
HLCS-202ENST00000399120 CHD6Q8TD26 2715 aa6.18□□□□□ -1.42
HLCS-202ENST00000399120 MKI67P46013 3256 aaKnown RBP6.17□□□□□ -1.42
HLCS-202ENST00000399120 XP32Q5T750 250 aa6.17□□□□□ -1.42
HLCS-202ENST00000399120 BRCA2P51587 3418 aa6.16□□□□□ -1.42
HLCS-202ENST00000399120 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
HLCS-202ENST00000399120 H0YAA0 97 aa6.16□□□□□ -1.42
HLCS-202ENST00000399120 TEX15Q9BXT5 2789 aa6.14□□□□□ -1.43
HLCS-202ENST00000399120 LAMA3Q16787 3333 aa6.13□□□□□ -1.43
HLCS-202ENST00000399120 UNC79Q9P2D8 2635 aa6.12□□□□□ -1.43
HLCS-202ENST00000399120 TEP1Q99973 2627 aaKnown RBP6.08□□□□□ -1.44
HLCS-202ENST00000399120 NOTCH1P46531 2555 aa6.07□□□□□ -1.44
HLCS-202ENST00000399120 TPRXLQ17RH7 258 aa6.04□□□□□ -1.44
HLCS-202ENST00000399120 ZNF292O60281 2723 aa6.03□□□□□ -1.44
HLCS-202ENST00000399120 GCN1Q92616 2671 aaKnown RBP6.02□□□□□ -1.45
HLCS-202ENST00000399120 KRTAP1-4P0C5Y4 121 aa6.01□□□□□ -1.45
HLCS-202ENST00000399120 COL6A5A8TX70 2615 aa6.01□□□□□ -1.45
HLCS-202ENST00000399120 LAMA2P24043 3122 aaKnown RBP6□□□□□ -1.45
HLCS-202ENST00000399120 SETXQ7Z333 2677 aaKnown RBP5.99□□□□□ -1.45
HLCS-202ENST00000399120 UNC80Q8N2C7 3258 aa5.98□□□□□ -1.45
HLCS-202ENST00000399120 CDH23Q9H251 3354 aa5.95□□□□□ -1.46
HLCS-202ENST00000399120 KRTAP21-3Q3LHN1 58 aa5.94□□□□□ -1.46
HLCS-202ENST00000399120 PRUNE2Q8WUY3 3088 aa5.94□□□□□ -1.46
HLCS-202ENST00000399120 A0A0C4DFX4 3053 aa5.93□□□□□ -1.46
HLCS-202ENST00000399120 TRIOO75962 3097 aa5.92□□□□□ -1.46
HLCS-202ENST00000399120 NBEAL2Q6ZNJ1 2754 aa5.89□□□□□ -1.47
HLCS-202ENST00000399120 KRTAP13-3Q3SY46 172 aa5.88□□□□□ -1.47
HLCS-202ENST00000399120 MGAQ8IWI9 3026 aa5.87□□□□□ -1.47
HLCS-202ENST00000399120 IGSF10Q6WRI0 2623 aa5.87□□□□□ -1.47
HLCS-202ENST00000399120 SZT2Q5T011 3432 aa5.86□□□□□ -1.47
HLCS-202ENST00000399120 KRTAP12-2P59991 146 aa5.84□□□□□ -1.47
HLCS-202ENST00000399120 NSD1Q96L73 2696 aaPredicted RBP5.82□□□□□ -1.48
HLCS-202ENST00000399120 BAHCC1Q9P281 2608 aa5.81□□□□□ -1.48
HLCS-202ENST00000399120 WDFY4Q6ZS81 3184 aa5.8□□□□□ -1.48
HLCS-202ENST00000399120 MAP1AP78559 2803 aaPredicted RBP5.79□□□□□ -1.48
HLCS-202ENST00000399120 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
HLCS-202ENST00000399120 CFAP54Q96N23 3096 aa5.78□□□□□ -1.48
HLCS-202ENST00000399120 XIRP2A4UGR9 3374 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms