RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.73
HLCS-202ENST00000399120 PELP1Q8IZL8 1130 aaKnown RBP18.98■□□□□ 0.63
HLCS-202ENST00000399120 SUPT5HO00267 1087 aaKnown RBP18.51■□□□□ 0.55
HLCS-202ENST00000399120 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
HLCS-202ENST00000399120 ERICH6Q7L0X2 663 aa18.28■□□□□ 0.52
HLCS-202ENST00000399120 APLP2Q06481 763 aa18.2■□□□□ 0.5
HLCS-202ENST00000399120 CCER1Q8TC90 406 aaPredicted RBP18.13■□□□□ 0.49
HLCS-202ENST00000399120 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
HLCS-202ENST00000399120 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
HLCS-202ENST00000399120 CENPBP07199 599 aaPredicted RBP17.85■□□□□ 0.45
HLCS-202ENST00000399120 TTBK1Q5TCY1 1321 aaPredicted RBP17.76■□□□□ 0.43
HLCS-202ENST00000399120 PCGF6Q9BYE7 350 aa17.67■□□□□ 0.42
HLCS-202ENST00000399120 NEFLP07196 543 aa17.64■□□□□ 0.41
HLCS-202ENST00000399120 MYT1Q01538 1121 aa17.63■□□□□ 0.41
HLCS-202ENST00000399120 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
HLCS-202ENST00000399120 RANGAP1P46060 587 aaPredicted RBP17.47■□□□□ 0.39
HLCS-202ENST00000399120 ATP1B4Q9UN42 357 aaPredicted RBP17.47■□□□□ 0.39
HLCS-202ENST00000399120 DAXXQ9UER7 740 aaPredicted RBP17.39■□□□□ 0.37
HLCS-202ENST00000399120 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
HLCS-202ENST00000399120 UBTFP17480 764 aaKnown RBP17.12■□□□□ 0.33
HLCS-202ENST00000399120 TRIM41Q8WV44 630 aa17.1■□□□□ 0.33
HLCS-202ENST00000399120 POLR3GLQ9BT43 218 aa17.01■□□□□ 0.31
HLCS-202ENST00000399120 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
HLCS-202ENST00000399120 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
HLCS-202ENST00000399120 ZNF316A6NFI3 1004 aaPredicted RBP16.92■□□□□ 0.3
HLCS-202ENST00000399120 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
HLCS-202ENST00000399120 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
HLCS-202ENST00000399120 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
HLCS-202ENST00000399120 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
HLCS-202ENST00000399120 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
HLCS-202ENST00000399120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.76■□□□□ 0.27
HLCS-202ENST00000399120 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
HLCS-202ENST00000399120 ITGAEP38570 1179 aa16.74■□□□□ 0.27
HLCS-202ENST00000399120 CHIC1Q5VXU3 224 aa16.68■□□□□ 0.26
HLCS-202ENST00000399120 TRIM26Q12899 539 aaPredicted RBP16.64■□□□□ 0.26
HLCS-202ENST00000399120 HRCP23327 699 aa16.6■□□□□ 0.25
HLCS-202ENST00000399120 ZBTB47Q9UFB7 747 aaPredicted RBP16.52■□□□□ 0.24
HLCS-202ENST00000399120 CDK11AQ9UQ88 783 aaPredicted RBP16.33■□□□□ 0.21
HLCS-202ENST00000399120 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
HLCS-202ENST00000399120 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
HLCS-202ENST00000399120 BCANQ96GW7 911 aa16.3■□□□□ 0.2
HLCS-202ENST00000399120 BCL11AQ9H165 835 aa16.29■□□□□ 0.2
HLCS-202ENST00000399120 CANXP27824 592 aaKnown RBP16.27■□□□□ 0.19
HLCS-202ENST00000399120 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
HLCS-202ENST00000399120 FAM50AQ14320 339 aaKnown RBP16.22■□□□□ 0.19
HLCS-202ENST00000399120 ANP32CO43423 234 aa16.18■□□□□ 0.18
HLCS-202ENST00000399120 NEFMP07197 916 aa16.18■□□□□ 0.18
HLCS-202ENST00000399120 NEUROD1Q13562 356 aa16.16■□□□□ 0.18
HLCS-202ENST00000399120 ANP32BQ92688 251 aaKnown RBP16.15■□□□□ 0.18
HLCS-202ENST00000399120 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
HLCS-202ENST00000399120 ANP32AP39687 249 aaKnown RBP16.13■□□□□ 0.17
HLCS-202ENST00000399120 LOC105371045A0A1W2PR82 267 aa16.12■□□□□ 0.17
HLCS-202ENST00000399120 EIF5BO60841 1220 aaKnown RBP16.11■□□□□ 0.17
HLCS-202ENST00000399120 GTF3C3Q9Y5Q9 886 aa16.08■□□□□ 0.17
HLCS-202ENST00000399120 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
HLCS-202ENST00000399120 GLIPR1L2Q4G1C9 344 aa16.02■□□□□ 0.16
HLCS-202ENST00000399120 HSP90AA1P07900 732 aaKnown RBP16.01■□□□□ 0.15
HLCS-202ENST00000399120 UPF2Q9HAU5 1272 aaKnown RBP15.9■□□□□ 0.14
HLCS-202ENST00000399120 CDK11BP21127 795 aaKnown RBP15.84■□□□□ 0.13
HLCS-202ENST00000399120 FBLN2P98095 1184 aa15.73■□□□□ 0.11
HLCS-202ENST00000399120 ARXQ96QS3 562 aa15.72■□□□□ 0.11
HLCS-202ENST00000399120 ESF1Q9H501 851 aaKnown RBP15.7■□□□□ 0.1
HLCS-202ENST00000399120 ACIN1Q9UKV3 1341 aaKnown RBP15.69■□□□□ 0.1
HLCS-202ENST00000399120 FKBP8Q14318 412 aa15.69■□□□□ 0.1
HLCS-202ENST00000399120 NBR1Q14596 966 aa15.66■□□□□ 0.1
HLCS-202ENST00000399120 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.65■□□□□ 0.1
HLCS-202ENST00000399120 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
HLCS-202ENST00000399120 ZNF777Q9ULD5 760 aaPredicted RBP15.61■□□□□ 0.09
HLCS-202ENST00000399120 CHGAP10645 457 aaKnown RBP15.61■□□□□ 0.09
HLCS-202ENST00000399120 HNRNPUQ00839 825 aaKnown RBP eCLIP15.59■□□□□ 0.09
HLCS-202ENST00000399120 ARID3CA6NKF2 412 aa15.59■□□□□ 0.09
HLCS-202ENST00000399120 CCDC136Q96JN2 1154 aa15.58■□□□□ 0.08
HLCS-202ENST00000399120 SALL2Q9Y467 1007 aaPredicted RBP15.57■□□□□ 0.08
HLCS-202ENST00000399120 FAM9BQ8IZU0 186 aa15.57■□□□□ 0.08
HLCS-202ENST00000399120 PLPPR3Q6T4P5 718 aa15.55■□□□□ 0.08
HLCS-202ENST00000399120 NCLP19338 710 aaKnown RBP15.54■□□□□ 0.08
HLCS-202ENST00000399120 TNNT2P45379 298 aaPredicted RBP15.54■□□□□ 0.08
HLCS-202ENST00000399120 MYH16Q9H6N6 1097 aa15.54■□□□□ 0.08
HLCS-202ENST00000399120 TRIM44Q96DX7 344 aaPredicted RBP15.53■□□□□ 0.08
HLCS-202ENST00000399120 P3H3Q8IVL6 736 aa15.52■□□□□ 0.07
HLCS-202ENST00000399120 WDR43Q15061 677 aaKnown RBP eCLIP15.5■□□□□ 0.07
HLCS-202ENST00000399120 TONSLQ96HA7 1378 aa15.5■□□□□ 0.07
HLCS-202ENST00000399120 A0A0G2JS52 829 aa15.49■□□□□ 0.07
HLCS-202ENST00000399120 TMC1Q8TDI8 760 aa15.48■□□□□ 0.07
HLCS-202ENST00000399120 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
HLCS-202ENST00000399120 ZRSR1Q15695 479 aaKnown RBP15.44■□□□□ 0.06
HLCS-202ENST00000399120 GOLGA6L22H0YM25 854 aa15.44■□□□□ 0.06
HLCS-202ENST00000399120 BECN1Q14457 450 aa15.44■□□□□ 0.06
HLCS-202ENST00000399120 ANP32EQ9BTT0 268 aa15.44■□□□□ 0.06
HLCS-202ENST00000399120 PTMAP06454 111 aaKnown RBP15.42■□□□□ 0.06
HLCS-202ENST00000399120 DDRGK1Q96HY6 314 aa15.41■□□□□ 0.06
HLCS-202ENST00000399120 DDX10Q13206 875 aaKnown RBP15.41■□□□□ 0.06
HLCS-202ENST00000399120 TULP1O00294 542 aaPredicted RBP15.39■□□□□ 0.05
HLCS-202ENST00000399120 DNTTIP2Q5QJE6 756 aaKnown RBP15.39■□□□□ 0.05
HLCS-202ENST00000399120 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
HLCS-202ENST00000399120 ZBTB7CA1YPR0 619 aa15.34■□□□□ 0.05
HLCS-202ENST00000399120 MRS2Q9HD23 443 aa15.33■□□□□ 0.04
HLCS-202ENST00000399120 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
HLCS-202ENST00000399120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.04
HLCS-202ENST00000399120 CASC1Q6TDU7 716 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms