RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 Q8NDZ9 215 aa4.25□□□□□ -1.73
PBRM1-202ENST00000337303 OXTP01178 125 aa4.23□□□□□ -1.73
PBRM1-202ENST00000337303 KRTAP1-3Q8IUG1 177 aa4.22□□□□□ -1.73
PBRM1-202ENST00000337303 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
PBRM1-202ENST00000337303 UNC79Q9P2D8 2635 aa4.22□□□□□ -1.73
PBRM1-202ENST00000337303 SPRR1BP22528 89 aa4.22□□□□□ -1.73
PBRM1-202ENST00000337303 LINC00472Q9H8W2 130 aa4.22□□□□□ -1.73
PBRM1-202ENST00000337303 ZFHX3Q15911 3703 aa4.22□□□□□ -1.73
PBRM1-202ENST00000337303 SMR3BP02814 79 aaPredicted RBP4.21□□□□□ -1.73
PBRM1-202ENST00000337303 KRTAP1-1Q07627 177 aa4.21□□□□□ -1.74
PBRM1-202ENST00000337303 J3QL48 77 aa4.2□□□□□ -1.74
PBRM1-202ENST00000337303 H3BS24 57 aa4.2□□□□□ -1.74
PBRM1-202ENST00000337303 SPINK7P58062 85 aa4.2□□□□□ -1.74
PBRM1-202ENST00000337303 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.19□□□□□ -1.74
PBRM1-202ENST00000337303 DMAC1Q96GE9 116 aa4.19□□□□□ -1.74
PBRM1-202ENST00000337303 WDFY3Q8IZQ1 3526 aa4.18□□□□□ -1.74
PBRM1-202ENST00000337303 DMBT1Q9UGM3 2413 aaPredicted RBP4.18□□□□□ -1.74
PBRM1-202ENST00000337303 ZCCHC13Q8WW36 166 aaKnown RBP4.18□□□□□ -1.74
PBRM1-202ENST00000337303 BRCA2P51587 3418 aa4.17□□□□□ -1.74
PBRM1-202ENST00000337303 GCN1Q92616 2671 aaKnown RBP4.17□□□□□ -1.74
PBRM1-202ENST00000337303 Q5W150 140 aa4.17□□□□□ -1.74
PBRM1-202ENST00000337303 CSAG1Q6PB30 78 aa4.17□□□□□ -1.74
PBRM1-202ENST00000337303 C5orf42Q9H799 3197 aa4.16□□□□□ -1.74
PBRM1-202ENST00000337303 COL6A5A8TX70 2615 aa4.16□□□□□ -1.74
PBRM1-202ENST00000337303 TEX15Q9BXT5 2789 aa4.16□□□□□ -1.74
PBRM1-202ENST00000337303 PLAC8Q9NZF1 115 aa4.15□□□□□ -1.74
PBRM1-202ENST00000337303 TNP2Q05952 138 aa4.15□□□□□ -1.74
PBRM1-202ENST00000337303 STAB2Q8WWQ8 2551 aa4.15□□□□□ -1.75
PBRM1-202ENST00000337303 CAMK2N1Q7Z7J9 78 aa4.15□□□□□ -1.75
PBRM1-202ENST00000337303 REV3LO60673 3130 aa4.15□□□□□ -1.75
PBRM1-202ENST00000337303 Q6ZSA8 131 aa4.13□□□□□ -1.75
PBRM1-202ENST00000337303 ASB16-AS1Q495Z4 193 aa4.12□□□□□ -1.75
PBRM1-202ENST00000337303 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
PBRM1-202ENST00000337303 KRTAP26-1Q6PEX3 210 aa4.12□□□□□ -1.75
PBRM1-202ENST00000337303 CFAP54Q96N23 3096 aa4.11□□□□□ -1.75
PBRM1-202ENST00000337303 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
PBRM1-202ENST00000337303 KRTAP29-1A8MX34 341 aaPredicted RBP4.1□□□□□ -1.75
PBRM1-202ENST00000337303 Q6ZR54 194 aa4.1□□□□□ -1.75
PBRM1-202ENST00000337303 MAP1AP78559 2803 aaPredicted RBP4.1□□□□□ -1.75
PBRM1-202ENST00000337303 RPL37P61927 97 aaKnown RBP4.09□□□□□ -1.75
PBRM1-202ENST00000337303 RANBP2P49792 3224 aaKnown RBP4.09□□□□□ -1.75
PBRM1-202ENST00000337303 MKI67P46013 3256 aaKnown RBP4.09□□□□□ -1.75
PBRM1-202ENST00000337303 KRTAP4-16G5E9R7 235 aaPredicted RBP4.08□□□□□ -1.76
PBRM1-202ENST00000337303 S4R3F8 94 aa4.08□□□□□ -1.76
PBRM1-202ENST00000337303 ROMO1P60602 79 aa4.07□□□□□ -1.76
PBRM1-202ENST00000337303 NBEAL2Q6ZNJ1 2754 aa4.07□□□□□ -1.76
PBRM1-202ENST00000337303 ZNF292O60281 2723 aa4.06□□□□□ -1.76
PBRM1-202ENST00000337303 FLNCQ14315 2725 aa4.06□□□□□ -1.76
PBRM1-202ENST00000337303 KRTAP1-5Q9BYS1 174 aa4.05□□□□□ -1.76
PBRM1-202ENST00000337303 UBR5O95071 2799 aaPredicted RBP4.05□□□□□ -1.76
PBRM1-202ENST00000337303 MGAQ8IWI9 3026 aa4.05□□□□□ -1.76
PBRM1-202ENST00000337303 H1FX-AS1Q4G0G2 97 aa4.05□□□□□ -1.76
PBRM1-202ENST00000337303 R4GN34 69 aa4.04□□□□□ -1.76
PBRM1-202ENST00000337303 IGSF10Q6WRI0 2623 aa4.04□□□□□ -1.76
PBRM1-202ENST00000337303 SPATA8Q6RVD6 105 aa4.04□□□□□ -1.76
PBRM1-202ENST00000337303 LCE6AA0A183 80 aa4.02□□□□□ -1.77
PBRM1-202ENST00000337303 A6NN06 94 aa4.01□□□□□ -1.77
PBRM1-202ENST00000337303 NSD1Q96L73 2696 aaPredicted RBP4.01□□□□□ -1.77
PBRM1-202ENST00000337303 TRIOO75962 3097 aa4.01□□□□□ -1.77
PBRM1-202ENST00000337303 LAMA2P24043 3122 aaKnown RBP4.01□□□□□ -1.77
PBRM1-202ENST00000337303 UTP20O75691 2785 aaKnown RBP3.99□□□□□ -1.77
PBRM1-202ENST00000337303 DSPP15924 2871 aaKnown RBP3.99□□□□□ -1.77
PBRM1-202ENST00000337303 LAMA3Q16787 3333 aa3.98□□□□□ -1.77
PBRM1-202ENST00000337303 CDH23Q9H251 3354 aa3.98□□□□□ -1.77
PBRM1-202ENST00000337303 SPTBN5Q9NRC6 3674 aaKnown RBP3.97□□□□□ -1.77
PBRM1-202ENST00000337303 SPENQ96T58 3664 aaKnown RBP3.96□□□□□ -1.78
PBRM1-202ENST00000337303 UNC80Q8N2C7 3258 aa3.96□□□□□ -1.78
PBRM1-202ENST00000337303 A0A087X002 238 aa3.96□□□□□ -1.78
PBRM1-202ENST00000337303 PANO1I0J062 215 aa3.96□□□□□ -1.78
PBRM1-202ENST00000337303 NOTCH2NLQ7Z3S9 236 aa3.96□□□□□ -1.78
PBRM1-202ENST00000337303 M0QZ58 72 aa3.95□□□□□ -1.78
PBRM1-202ENST00000337303 M0R2T5 61 aa3.95□□□□□ -1.78
PBRM1-202ENST00000337303 MYO15AQ9UKN7 3530 aa3.95□□□□□ -1.78
PBRM1-202ENST00000337303 WDFY4Q6ZS81 3184 aa3.95□□□□□ -1.78
PBRM1-202ENST00000337303 SEC61BP60468 96 aaKnown RBP3.95□□□□□ -1.78
PBRM1-202ENST00000337303 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
PBRM1-202ENST00000337303 KRTAP10-1P60331 282 aa3.94□□□□□ -1.78
PBRM1-202ENST00000337303 PRUNE2Q8WUY3 3088 aa3.94□□□□□ -1.78
PBRM1-202ENST00000337303 KRTAP16-1A8MUX0 517 aa3.93□□□□□ -1.78
PBRM1-202ENST00000337303 ITPR1Q14643 2758 aa3.93□□□□□ -1.78
PBRM1-202ENST00000337303 KMT2BQ9UMN6 2715 aaPredicted RBP3.93□□□□□ -1.78
PBRM1-202ENST00000337303 FRYQ5TBA9 3013 aa3.92□□□□□ -1.78
PBRM1-202ENST00000337303 DNAH14Q0VDD8 3507 aa3.92□□□□□ -1.78
PBRM1-202ENST00000337303 KRTAP10-2P60368 255 aa3.92□□□□□ -1.78
PBRM1-202ENST00000337303 SZT2Q5T011 3432 aa3.91□□□□□ -1.78
PBRM1-202ENST00000337303 ADM2Q7Z4H4 148 aa3.91□□□□□ -1.78
PBRM1-202ENST00000337303 XIRP2A4UGR9 3374 aa3.9□□□□□ -1.78
PBRM1-202ENST00000337303 A8MU10 97 aa3.9□□□□□ -1.79
PBRM1-202ENST00000337303 LAMA1P25391 3075 aa3.9□□□□□ -1.79
PBRM1-202ENST00000337303 KRTAP11-1Q8IUC1 163 aa3.89□□□□□ -1.79
PBRM1-202ENST00000337303 FREM2Q5SZK8 3169 aa3.89□□□□□ -1.79
PBRM1-202ENST00000337303 KRTAP7-1Q8IUC3 87 aa3.89□□□□□ -1.79
PBRM1-202ENST00000337303 TENM4Q6N022 2769 aa3.89□□□□□ -1.79
PBRM1-202ENST00000337303 RPS29P62273 56 aaKnown RBP3.88□□□□□ -1.79
PBRM1-202ENST00000337303 DMDP11532 3685 aa3.87□□□□□ -1.79
PBRM1-202ENST00000337303 Q5VSD8 79 aa3.87□□□□□ -1.79
PBRM1-202ENST00000337303 VPS13AQ96RL7 3174 aa3.86□□□□□ -1.79
PBRM1-202ENST00000337303 TACC2O95359 2948 aa3.86□□□□□ -1.79
PBRM1-202ENST00000337303 ITPR2Q14571 2701 aa3.86□□□□□ -1.79
PBRM1-202ENST00000337303 KRTAP13-1Q8IUC0 172 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms