RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 DCAF8L2P0C7V8 631 aa11.33□□□□□ -0.6
PBRM1-202ENST00000337303 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
PBRM1-202ENST00000337303 PELP1Q8IZL8 1130 aaKnown RBP10.93□□□□□ -0.66
PBRM1-202ENST00000337303 NISCHQ9Y2I1 1504 aa10.79□□□□□ -0.68
PBRM1-202ENST00000337303 SHROOM4Q9ULL8 1493 aa10.69□□□□□ -0.7
PBRM1-202ENST00000337303 EHMT2Q96KQ7 1210 aa10.59□□□□□ -0.71
PBRM1-202ENST00000337303 PCGF6Q9BYE7 350 aa10.56□□□□□ -0.72
PBRM1-202ENST00000337303 CENPBP07199 599 aaPredicted RBP10.55□□□□□ -0.72
PBRM1-202ENST00000337303 APLP2Q06481 763 aa10.54□□□□□ -0.72
PBRM1-202ENST00000337303 ZEB1P37275 1124 aaPredicted RBP10.51□□□□□ -0.73
PBRM1-202ENST00000337303 MYT1Q01538 1121 aa10.5□□□□□ -0.73
PBRM1-202ENST00000337303 ERICH6Q7L0X2 663 aa10.42□□□□□ -0.74
PBRM1-202ENST00000337303 CCER1Q8TC90 406 aaPredicted RBP10.41□□□□□ -0.74
PBRM1-202ENST00000337303 FAM9AQ8IZU1 332 aaPredicted RBP10.39□□□□□ -0.75
PBRM1-202ENST00000337303 TTBK1Q5TCY1 1321 aaPredicted RBP10.3□□□□□ -0.76
PBRM1-202ENST00000337303 NEFLP07196 543 aa10.24□□□□□ -0.77
PBRM1-202ENST00000337303 TRIM41Q8WV44 630 aa10.22□□□□□ -0.77
PBRM1-202ENST00000337303 HRCP23327 699 aa10.16□□□□□ -0.78
PBRM1-202ENST00000337303 YTHDC1Q96MU7 727 aaKnown RBP10.16□□□□□ -0.78
PBRM1-202ENST00000337303 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
PBRM1-202ENST00000337303 UBTFP17480 764 aaKnown RBP10.08□□□□□ -0.8
PBRM1-202ENST00000337303 RANGAP1P46060 587 aaPredicted RBP10.08□□□□□ -0.8
PBRM1-202ENST00000337303 ATP1B4Q9UN42 357 aaPredicted RBP10□□□□□ -0.81
PBRM1-202ENST00000337303 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
PBRM1-202ENST00000337303 DAXXQ9UER7 740 aaPredicted RBP9.92□□□□□ -0.82
PBRM1-202ENST00000337303 CHIC1Q5VXU3 224 aa9.87□□□□□ -0.83
PBRM1-202ENST00000337303 LOC105371045A0A1W2PR82 267 aa9.84□□□□□ -0.83
PBRM1-202ENST00000337303 DIEXFQ68CQ4 756 aaKnown RBP9.82□□□□□ -0.84
PBRM1-202ENST00000337303 RTL5Q5HYW3 569 aaPredicted RBP9.8□□□□□ -0.84
PBRM1-202ENST00000337303 HNRNPUL2Q1KMD3 747 aaKnown RBP9.79□□□□□ -0.84
PBRM1-202ENST00000337303 ITGAEP38570 1179 aa9.77□□□□□ -0.85
PBRM1-202ENST00000337303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-202ENST00000337303 POLR3GLQ9BT43 218 aa9.73□□□□□ -0.85
PBRM1-202ENST00000337303 GTF3C3Q9Y5Q9 886 aa9.71□□□□□ -0.85
PBRM1-202ENST00000337303 ZNF316A6NFI3 1004 aaPredicted RBP9.68□□□□□ -0.86
PBRM1-202ENST00000337303 CLSPNQ9HAW4 1339 aa9.63□□□□□ -0.87
PBRM1-202ENST00000337303 CNGB1Q14028 1251 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-202ENST00000337303 CDK11AQ9UQ88 783 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-202ENST00000337303 ACIN1Q9UKV3 1341 aaKnown RBP9.6□□□□□ -0.87
PBRM1-202ENST00000337303 BCANQ96GW7 911 aa9.58□□□□□ -0.88
PBRM1-202ENST00000337303 ANP32CO43423 234 aa9.55□□□□□ -0.88
PBRM1-202ENST00000337303 MYT1LQ9UL68 1186 aa9.53□□□□□ -0.88
PBRM1-202ENST00000337303 FAM50AQ14320 339 aaKnown RBP9.51□□□□□ -0.89
PBRM1-202ENST00000337303 NEUROD1Q13562 356 aa9.49□□□□□ -0.89
PBRM1-202ENST00000337303 SLC4A1APQ9BWU0 796 aaKnown RBP9.47□□□□□ -0.89
PBRM1-202ENST00000337303 TRIM52Q96A61 297 aa9.46□□□□□ -0.9
PBRM1-202ENST00000337303 ANP32AP39687 249 aaKnown RBP9.45□□□□□ -0.9
PBRM1-202ENST00000337303 ZBTB47Q9UFB7 747 aaPredicted RBP9.39□□□□□ -0.91
PBRM1-202ENST00000337303 ZNF326Q5BKZ1 582 aaKnown RBP9.35□□□□□ -0.91
PBRM1-202ENST00000337303 FKBP8Q14318 412 aa9.35□□□□□ -0.91
PBRM1-202ENST00000337303 EIF5BO60841 1220 aaKnown RBP9.34□□□□□ -0.91
PBRM1-202ENST00000337303 CANXP27824 592 aaKnown RBP9.33□□□□□ -0.92
PBRM1-202ENST00000337303 NPM2Q86SE8 214 aaKnown RBP9.31□□□□□ -0.92
PBRM1-202ENST00000337303 DCAF1Q9Y4B6 1507 aa9.31□□□□□ -0.92
PBRM1-202ENST00000337303 CSRNP3Q8WYN3 585 aa9.3□□□□□ -0.92
PBRM1-202ENST00000337303 GLIPR1L2Q4G1C9 344 aa9.29□□□□□ -0.92
PBRM1-202ENST00000337303 SCAF1Q9H7N4 1312 aaKnown RBP9.28□□□□□ -0.92
PBRM1-202ENST00000337303 ANP32BQ92688 251 aaKnown RBP9.28□□□□□ -0.92
PBRM1-202ENST00000337303 HNRNPUQ00839 825 aaKnown RBP eCLIP9.27□□□□□ -0.93
PBRM1-202ENST00000337303 NEFMP07197 916 aa9.25□□□□□ -0.93
PBRM1-202ENST00000337303 UPF2Q9HAU5 1272 aaKnown RBP9.23□□□□□ -0.93
PBRM1-202ENST00000337303 DDX10Q13206 875 aaKnown RBP9.23□□□□□ -0.93
PBRM1-202ENST00000337303 TONSLQ96HA7 1378 aa9.23□□□□□ -0.93
PBRM1-202ENST00000337303 CCDC136Q96JN2 1154 aa9.21□□□□□ -0.94
PBRM1-202ENST00000337303 HSP90AA1P07900 732 aaKnown RBP9.2□□□□□ -0.94
PBRM1-202ENST00000337303 BCL11AQ9H165 835 aa9.2□□□□□ -0.94
PBRM1-202ENST00000337303 NBR1Q14596 966 aa9.19□□□□□ -0.94
PBRM1-202ENST00000337303 FAM9BQ8IZU0 186 aa9.19□□□□□ -0.94
PBRM1-202ENST00000337303 MIER1Q8N108 512 aa9.17□□□□□ -0.94
PBRM1-202ENST00000337303 CCDC180Q9P1Z9 1646 aa9.17□□□□□ -0.94
PBRM1-202ENST00000337303 P3H3Q8IVL6 736 aa9.15□□□□□ -0.94
PBRM1-202ENST00000337303 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.14□□□□□ -0.95
PBRM1-202ENST00000337303 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
PBRM1-202ENST00000337303 TMC1Q8TDI8 760 aa9.14□□□□□ -0.95
PBRM1-202ENST00000337303 ANP32EQ9BTT0 268 aa9.13□□□□□ -0.95
PBRM1-202ENST00000337303 SLC24A1O60721 1099 aa9.12□□□□□ -0.95
PBRM1-202ENST00000337303 MRS2Q9HD23 443 aa9.12□□□□□ -0.95
PBRM1-202ENST00000337303 ZCCHC6Q5VYS8 1495 aaKnown RBP9.12□□□□□ -0.95
PBRM1-202ENST00000337303 SALL2Q9Y467 1007 aaPredicted RBP9.09□□□□□ -0.95
PBRM1-202ENST00000337303 ZNF777Q9ULD5 760 aaPredicted RBP9.08□□□□□ -0.96
PBRM1-202ENST00000337303 DDRGK1Q96HY6 314 aa9.07□□□□□ -0.96
PBRM1-202ENST00000337303 ARID3CA6NKF2 412 aa9.06□□□□□ -0.96
PBRM1-202ENST00000337303 IRX6P78412 446 aaPredicted RBP9.06□□□□□ -0.96
PBRM1-202ENST00000337303 ABCC9O60706 1549 aa9.06□□□□□ -0.96
PBRM1-202ENST00000337303 FBLN2P98095 1184 aa9.06□□□□□ -0.96
PBRM1-202ENST00000337303 ARXQ96QS3 562 aa9.05□□□□□ -0.96
PBRM1-202ENST00000337303 WDR43Q15061 677 aaKnown RBP eCLIP9.05□□□□□ -0.96
PBRM1-202ENST00000337303 BECN1Q14457 450 aa9.04□□□□□ -0.96
PBRM1-202ENST00000337303 EIF4G2P78344 907 aaKnown RBP eCLIP9.03□□□□□ -0.96
PBRM1-202ENST00000337303 PPM1GO15355 546 aaPredicted RBP9.02□□□□□ -0.97
PBRM1-202ENST00000337303 TRIM44Q96DX7 344 aaPredicted RBP9.02□□□□□ -0.97
PBRM1-202ENST00000337303 ERICH6BQ5W0A0 696 aa9.01□□□□□ -0.97
PBRM1-202ENST00000337303 CHIC2Q9UKJ5 165 aa8.98□□□□□ -0.97
PBRM1-202ENST00000337303 GOLGA6L22H0YM25 854 aa8.98□□□□□ -0.97
PBRM1-202ENST00000337303 HIRIP3Q9BW71 556 aaPredicted RBP8.98□□□□□ -0.97
PBRM1-202ENST00000337303 CLIP1P30622 1438 aa8.97□□□□□ -0.97
PBRM1-202ENST00000337303 SUPT16HQ9Y5B9 1047 aaKnown RBP8.97□□□□□ -0.97
PBRM1-202ENST00000337303 PPP4R2Q9NY27 417 aa8.96□□□□□ -0.97
PBRM1-202ENST00000337303 CHGAP10645 457 aaKnown RBP8.96□□□□□ -0.97
PBRM1-202ENST00000337303 TNNT2P45379 298 aaPredicted RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms