RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 KRTAP4-16G5E9R7 235 aaPredicted RBP9.59□□□□□ -0.87
SHTN1-201ENST00000260777 RANBP2P49792 3224 aaKnown RBP9.56□□□□□ -0.88
SHTN1-201ENST00000260777 LINC01554Q52M75 96 aa9.56□□□□□ -0.88
SHTN1-201ENST00000260777 HELZ2Q9BYK8 2649 aaKnown RBP9.55□□□□□ -0.88
SHTN1-201ENST00000260777 CFAP54Q96N23 3096 aa9.54□□□□□ -0.88
SHTN1-201ENST00000260777 LINC00483Q53H64 154 aa9.54□□□□□ -0.88
SHTN1-201ENST00000260777 SPINK7P58062 85 aa9.53□□□□□ -0.88
SHTN1-201ENST00000260777 CFAP46Q8IYW2 2715 aa9.51□□□□□ -0.89
SHTN1-201ENST00000260777 MAST4O15021 2626 aa9.51□□□□□ -0.89
SHTN1-201ENST00000260777 MGAQ8IWI9 3026 aa9.51□□□□□ -0.89
SHTN1-201ENST00000260777 Q6ZSA8 131 aa9.5□□□□□ -0.89
SHTN1-201ENST00000260777 KRTAP29-1A8MX34 341 aaPredicted RBP9.5□□□□□ -0.89
SHTN1-201ENST00000260777 MKI67P46013 3256 aaKnown RBP9.5□□□□□ -0.89
SHTN1-201ENST00000260777 DMAC1Q96GE9 116 aa9.5□□□□□ -0.89
SHTN1-201ENST00000260777 Q6ZR54 194 aa9.49□□□□□ -0.89
SHTN1-201ENST00000260777 ZNF292O60281 2723 aa9.49□□□□□ -0.89
SHTN1-201ENST00000260777 CENPEQ02224 2701 aa9.47□□□□□ -0.89
SHTN1-201ENST00000260777 PRAC1Q96KF2 57 aa9.46□□□□□ -0.9
SHTN1-201ENST00000260777 LAMA3Q16787 3333 aa9.41□□□□□ -0.9
SHTN1-201ENST00000260777 S4R3F8 94 aa9.41□□□□□ -0.9
SHTN1-201ENST00000260777 CHD6Q8TD26 2715 aa9.4□□□□□ -0.9
SHTN1-201ENST00000260777 CSAG1Q6PB30 78 aa9.37□□□□□ -0.91
SHTN1-201ENST00000260777 LAMA2P24043 3122 aaKnown RBP9.36□□□□□ -0.91
SHTN1-201ENST00000260777 PANO1I0J062 215 aa9.36□□□□□ -0.91
SHTN1-201ENST00000260777 LUZP6Q538Z0 58 aa9.35□□□□□ -0.91
SHTN1-201ENST00000260777 AKAP13Q12802 2813 aa9.35□□□□□ -0.91
SHTN1-201ENST00000260777 GCN1Q92616 2671 aaKnown RBP9.34□□□□□ -0.91
SHTN1-201ENST00000260777 KRTAP10-1P60331 282 aa9.33□□□□□ -0.92
SHTN1-201ENST00000260777 LCE6AA0A183 80 aa9.31□□□□□ -0.92
SHTN1-201ENST00000260777 CAMK2N1Q7Z7J9 78 aa9.31□□□□□ -0.92
SHTN1-201ENST00000260777 KRTAP10-2P60368 255 aa9.3□□□□□ -0.92
SHTN1-201ENST00000260777 ASB16-AS1Q495Z4 193 aa9.29□□□□□ -0.92
SHTN1-201ENST00000260777 UNC79Q9P2D8 2635 aa9.28□□□□□ -0.92
SHTN1-201ENST00000260777 WDFY4Q6ZS81 3184 aa9.28□□□□□ -0.92
SHTN1-201ENST00000260777 BRCA2P51587 3418 aa9.26□□□□□ -0.93
SHTN1-201ENST00000260777 H1FX-AS1Q4G0G2 97 aa9.26□□□□□ -0.93
SHTN1-201ENST00000260777 TRIOO75962 3097 aa9.25□□□□□ -0.93
SHTN1-201ENST00000260777 RPL37P61927 97 aaKnown RBP9.24□□□□□ -0.93
SHTN1-201ENST00000260777 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
SHTN1-201ENST00000260777 KRTAP11-1Q8IUC1 163 aa9.22□□□□□ -0.93
SHTN1-201ENST00000260777 TEX15Q9BXT5 2789 aa9.22□□□□□ -0.93
SHTN1-201ENST00000260777 A0A087X002 238 aa9.21□□□□□ -0.93
SHTN1-201ENST00000260777 NOTCH2NLQ7Z3S9 236 aa9.21□□□□□ -0.93
SHTN1-201ENST00000260777 ROMO1P60602 79 aa9.21□□□□□ -0.94
SHTN1-201ENST00000260777 NBEAL1Q6ZS30 2694 aa9.19□□□□□ -0.94
SHTN1-201ENST00000260777 UNC80Q8N2C7 3258 aa9.19□□□□□ -0.94
SHTN1-201ENST00000260777 SPATA8Q6RVD6 105 aa9.18□□□□□ -0.94
SHTN1-201ENST00000260777 FRYQ5TBA9 3013 aa9.17□□□□□ -0.94
SHTN1-201ENST00000260777 R4GN34 69 aa9.16□□□□□ -0.94
SHTN1-201ENST00000260777 Q6ZRN7 208 aaPredicted RBP9.16□□□□□ -0.94
SHTN1-201ENST00000260777 NBEAL2Q6ZNJ1 2754 aa9.16□□□□□ -0.94
SHTN1-201ENST00000260777 SETXQ7Z333 2677 aaKnown RBP9.14□□□□□ -0.95
SHTN1-201ENST00000260777 Q5VSD8 79 aa9.14□□□□□ -0.95
SHTN1-201ENST00000260777 H3BS24 57 aa9.14□□□□□ -0.95
SHTN1-201ENST00000260777 IGSF10Q6WRI0 2623 aa9.14□□□□□ -0.95
SHTN1-201ENST00000260777 PRUNE2Q8WUY3 3088 aa9.14□□□□□ -0.95
SHTN1-201ENST00000260777 DSPP15924 2871 aaKnown RBP9.13□□□□□ -0.95
SHTN1-201ENST00000260777 VPS13AQ96RL7 3174 aa9.13□□□□□ -0.95
SHTN1-201ENST00000260777 KRTAP13-1Q8IUC0 172 aa9.12□□□□□ -0.95
SHTN1-201ENST00000260777 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
SHTN1-201ENST00000260777 STAB1Q9NY15 2570 aa9.11□□□□□ -0.95
SHTN1-201ENST00000260777 TEP1Q99973 2627 aaKnown RBP9.1□□□□□ -0.95
SHTN1-201ENST00000260777 RPS29P62273 56 aaKnown RBP9.1□□□□□ -0.95
SHTN1-201ENST00000260777 A6NN06 94 aa9.09□□□□□ -0.95
SHTN1-201ENST00000260777 COL6A5A8TX70 2615 aa9.08□□□□□ -0.96
SHTN1-201ENST00000260777 NOTCH1P46531 2555 aa9.07□□□□□ -0.96
SHTN1-201ENST00000260777 XIRP2A4UGR9 3374 aa9.07□□□□□ -0.96
SHTN1-201ENST00000260777 CDH23Q9H251 3354 aa9.05□□□□□ -0.96
SHTN1-201ENST00000260777 M0R2T5 61 aa9.04□□□□□ -0.96
SHTN1-201ENST00000260777 MAP1AP78559 2803 aaPredicted RBP9.02□□□□□ -0.97
SHTN1-201ENST00000260777 M0QZ58 72 aa9.01□□□□□ -0.97
SHTN1-201ENST00000260777 ADM2Q7Z4H4 148 aa8.99□□□□□ -0.97
SHTN1-201ENST00000260777 KRTAP13-2Q52LG2 175 aa8.98□□□□□ -0.97
SHTN1-201ENST00000260777 UBR5O95071 2799 aaPredicted RBP8.98□□□□□ -0.97
SHTN1-201ENST00000260777 KALRNO60229 2985 aa8.95□□□□□ -0.98
SHTN1-201ENST00000260777 A0A0A0MQY5 61 aa8.95□□□□□ -0.98
SHTN1-201ENST00000260777 CELSR3Q9NYQ7 3312 aa8.92□□□□□ -0.98
SHTN1-201ENST00000260777 KRTAP25-1Q3LHN0 102 aa8.9□□□□□ -0.99
SHTN1-201ENST00000260777 LAMA1P25391 3075 aa8.89□□□□□ -0.99
SHTN1-201ENST00000260777 NSD1Q96L73 2696 aaPredicted RBP8.89□□□□□ -0.99
SHTN1-201ENST00000260777 DMBT1Q9UGM3 2413 aaPredicted RBP8.89□□□□□ -0.99
SHTN1-201ENST00000260777 ITPR1Q14643 2758 aa8.88□□□□□ -0.99
SHTN1-201ENST00000260777 NBEAQ8NFP9 2946 aa8.88□□□□□ -0.99
SHTN1-201ENST00000260777 ITPR2Q14571 2701 aa8.87□□□□□ -0.99
SHTN1-201ENST00000260777 A8MU10 97 aa8.87□□□□□ -0.99
SHTN1-201ENST00000260777 VCANP13611 3396 aa8.86□□□□□ -0.99
SHTN1-201ENST00000260777 DNAH14Q0VDD8 3507 aa8.85□□□□□ -0.99
SHTN1-201ENST00000260777 SZT2Q5T011 3432 aa8.84□□□□□ -0.99
SHTN1-201ENST00000260777 ATMQ13315 3056 aa8.82□□□□□ -1
SHTN1-201ENST00000260777 FREM2Q5SZK8 3169 aa8.81□□□□□ -1
SHTN1-201ENST00000260777 KMT2BQ9UMN6 2715 aaPredicted RBP8.81□□□□□ -1
SHTN1-201ENST00000260777 ADGRG4Q8IZF6 3080 aa8.8□□□□□ -1
SHTN1-201ENST00000260777 LRBAP50851 2863 aa8.8□□□□□ -1
SHTN1-201ENST00000260777 FLNCQ14315 2725 aa8.8□□□□□ -1
SHTN1-201ENST00000260777 STAB2Q8WWQ8 2551 aa8.79□□□□□ -1
SHTN1-201ENST00000260777 BAHCC1Q9P281 2608 aa8.77□□□□□ -1
SHTN1-201ENST00000260777 FLG2Q5D862 2391 aaPredicted RBP8.74□□□□□ -1.01
SHTN1-201ENST00000260777 A8MUU9 505 aa8.73□□□□□ -1.01
SHTN1-201ENST00000260777 UTP20O75691 2785 aaKnown RBP8.72□□□□□ -1.01
SHTN1-201ENST00000260777 PLAC4Q8WY50 150 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms