RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
SHTN1-201ENST00000260777 NISCHQ9Y2I1 1504 aa26.77■■□□□ 1.88
SHTN1-201ENST00000260777 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.77
SHTN1-201ENST00000260777 SHROOM4Q9ULL8 1493 aa25.68■■□□□ 1.7
SHTN1-201ENST00000260777 EHMT2Q96KQ7 1210 aa24.98■■□□□ 1.59
SHTN1-201ENST00000260777 PELP1Q8IZL8 1130 aaKnown RBP24.9■■□□□ 1.58
SHTN1-201ENST00000260777 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
SHTN1-201ENST00000260777 APLP2Q06481 763 aa24.7■■□□□ 1.54
SHTN1-201ENST00000260777 FAM9AQ8IZU1 332 aaPredicted RBP24.55■■□□□ 1.52
SHTN1-201ENST00000260777 ZEB1P37275 1124 aaPredicted RBP24.49■■□□□ 1.51
SHTN1-201ENST00000260777 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
SHTN1-201ENST00000260777 CENPBP07199 599 aaPredicted RBP24.28■■□□□ 1.48
SHTN1-201ENST00000260777 TTBK1Q5TCY1 1321 aaPredicted RBP24.23■■□□□ 1.47
SHTN1-201ENST00000260777 CCER1Q8TC90 406 aaPredicted RBP24.15■■□□□ 1.46
SHTN1-201ENST00000260777 UBTFP17480 764 aaKnown RBP23.86■■□□□ 1.41
SHTN1-201ENST00000260777 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
SHTN1-201ENST00000260777 TRIM26Q12899 539 aaPredicted RBP23.83■■□□□ 1.41
SHTN1-201ENST00000260777 HRCP23327 699 aa23.78■■□□□ 1.4
SHTN1-201ENST00000260777 ERICH6Q7L0X2 663 aa23.74■■□□□ 1.39
SHTN1-201ENST00000260777 MYT1Q01538 1121 aa23.66■■□□□ 1.38
SHTN1-201ENST00000260777 ATP1B4Q9UN42 357 aaPredicted RBP23.6■■□□□ 1.37
SHTN1-201ENST00000260777 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
SHTN1-201ENST00000260777 YTHDC1Q96MU7 727 aaKnown RBP23.57■■□□□ 1.36
SHTN1-201ENST00000260777 NEFLP07196 543 aa23.56■■□□□ 1.36
SHTN1-201ENST00000260777 PPARGC1BQ86YN6 1023 aaKnown RBP23.52■■□□□ 1.35
SHTN1-201ENST00000260777 LOC105371045A0A1W2PR82 267 aa23.42■■□□□ 1.34
SHTN1-201ENST00000260777 HNRNPUL2Q1KMD3 747 aaKnown RBP23.06■■□□□ 1.28
SHTN1-201ENST00000260777 ITGAEP38570 1179 aa23.02■■□□□ 1.28
SHTN1-201ENST00000260777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.95■■□□□ 1.26
SHTN1-201ENST00000260777 DIEXFQ68CQ4 756 aaKnown RBP22.95■■□□□ 1.26
SHTN1-201ENST00000260777 POLR3GLQ9BT43 218 aa22.72■■□□□ 1.23
SHTN1-201ENST00000260777 DAXXQ9UER7 740 aaPredicted RBP22.71■■□□□ 1.23
SHTN1-201ENST00000260777 FAM50AQ14320 339 aaKnown RBP22.53■■□□□ 1.2
SHTN1-201ENST00000260777 GTF3C3Q9Y5Q9 886 aa22.53■■□□□ 1.2
SHTN1-201ENST00000260777 ABCC9O60706 1549 aa22.47■■□□□ 1.19
SHTN1-201ENST00000260777 MYT1LQ9UL68 1186 aa22.47■■□□□ 1.19
SHTN1-201ENST00000260777 ZNF316A6NFI3 1004 aaPredicted RBP22.47■■□□□ 1.19
SHTN1-201ENST00000260777 CNGB1Q14028 1251 aaPredicted RBP22.44■■□□□ 1.18
SHTN1-201ENST00000260777 NEUROD1Q13562 356 aa22.38■■□□□ 1.17
SHTN1-201ENST00000260777 RTL5Q5HYW3 569 aaPredicted RBP22.37■■□□□ 1.17
SHTN1-201ENST00000260777 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
SHTN1-201ENST00000260777 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
SHTN1-201ENST00000260777 TRIM52Q96A61 297 aa22.34■■□□□ 1.17
SHTN1-201ENST00000260777 ACIN1Q9UKV3 1341 aaKnown RBP22.34■■□□□ 1.17
SHTN1-201ENST00000260777 ANP32CO43423 234 aa22.33■■□□□ 1.17
SHTN1-201ENST00000260777 CSRNP3Q8WYN3 585 aa22.28■■□□□ 1.16
SHTN1-201ENST00000260777 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
SHTN1-201ENST00000260777 BCANQ96GW7 911 aa22.24■■□□□ 1.15
SHTN1-201ENST00000260777 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
SHTN1-201ENST00000260777 CLSPNQ9HAW4 1339 aa22.18■■□□□ 1.14
SHTN1-201ENST00000260777 SLC4A1APQ9BWU0 796 aaKnown RBP22.13■■□□□ 1.13
SHTN1-201ENST00000260777 ZNF326Q5BKZ1 582 aaKnown RBP22.01■■□□□ 1.11
SHTN1-201ENST00000260777 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
SHTN1-201ENST00000260777 CCDC180Q9P1Z9 1646 aa21.9■■□□□ 1.1
SHTN1-201ENST00000260777 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
SHTN1-201ENST00000260777 TONSLQ96HA7 1378 aa21.8■■□□□ 1.08
SHTN1-201ENST00000260777 ANP32AP39687 249 aaKnown RBP21.79■■□□□ 1.08
SHTN1-201ENST00000260777 FKBP8Q14318 412 aa21.77■■□□□ 1.08
SHTN1-201ENST00000260777 MYO15BQ96JP2 1530 aa21.73■■□□□ 1.07
SHTN1-201ENST00000260777 FBLN2P98095 1184 aa21.72■■□□□ 1.07
SHTN1-201ENST00000260777 CANXP27824 592 aaKnown RBP21.72■■□□□ 1.07
SHTN1-201ENST00000260777 ZBTB47Q9UFB7 747 aaPredicted RBP21.7■■□□□ 1.06
SHTN1-201ENST00000260777 DDX10Q13206 875 aaKnown RBP21.67■■□□□ 1.06
SHTN1-201ENST00000260777 ARID3CA6NKF2 412 aa21.66■■□□□ 1.06
SHTN1-201ENST00000260777 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
SHTN1-201ENST00000260777 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
SHTN1-201ENST00000260777 ZNF777Q9ULD5 760 aaPredicted RBP21.62■■□□□ 1.05
SHTN1-201ENST00000260777 CLIP1P30622 1438 aa21.59■■□□□ 1.05
SHTN1-201ENST00000260777 EEA1Q15075 1411 aa21.58■■□□□ 1.05
SHTN1-201ENST00000260777 MIER1Q8N108 512 aa21.56■■□□□ 1.04
SHTN1-201ENST00000260777 NEFMP07197 916 aa21.56■■□□□ 1.04
SHTN1-201ENST00000260777 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
SHTN1-201ENST00000260777 NPM2Q86SE8 214 aaKnown RBP21.53■■□□□ 1.04
SHTN1-201ENST00000260777 FAM9BQ8IZU0 186 aa21.52■■□□□ 1.04
SHTN1-201ENST00000260777 GOLGA3Q08378 1498 aa21.5■■□□□ 1.03
SHTN1-201ENST00000260777 CEP162Q5TB80 1403 aa21.5■■□□□ 1.03
SHTN1-201ENST00000260777 MTUS2Q5JR59 1369 aa21.4■■□□□ 1.02
SHTN1-201ENST00000260777 CCDC136Q96JN2 1154 aa21.39■■□□□ 1.01
SHTN1-201ENST00000260777 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
SHTN1-201ENST00000260777 TMC1Q8TDI8 760 aa21.39■■□□□ 1.01
SHTN1-201ENST00000260777 MRS2Q9HD23 443 aa21.37■■□□□ 1.01
SHTN1-201ENST00000260777 TNIKQ9UKE5 1360 aa21.37■■□□□ 1.01
SHTN1-201ENST00000260777 UPF2Q9HAU5 1272 aaKnown RBP21.33■■□□□ 1.01
SHTN1-201ENST00000260777 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
SHTN1-201ENST00000260777 BCL11AQ9H165 835 aa21.31■■□□□ 1
SHTN1-201ENST00000260777 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.3■■□□□ 1
SHTN1-201ENST00000260777 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
SHTN1-201ENST00000260777 EIF4G2P78344 907 aaKnown RBP eCLIP21.29■■□□□ 15e-23■■■■■ 59.6
SHTN1-201ENST00000260777 CEP164Q9UPV0 1460 aa21.27■■□□□ 1
SHTN1-201ENST00000260777 SLC24A1O60721 1099 aa21.27■■□□□ 1
SHTN1-201ENST00000260777 SALL2Q9Y467 1007 aaPredicted RBP21.25■□□□□ 0.99
SHTN1-201ENST00000260777 ANP32BQ92688 251 aaKnown RBP21.24■□□□□ 0.99
SHTN1-201ENST00000260777 TSPY4P0CV99 314 aa21.23■□□□□ 0.99
SHTN1-201ENST00000260777 TSPY10P0CW01 314 aa21.23■□□□□ 0.99
SHTN1-201ENST00000260777 HIRIP3Q9BW71 556 aaPredicted RBP21.22■□□□□ 0.99
SHTN1-201ENST00000260777 NACADO15069 1562 aa21.22■□□□□ 0.99
SHTN1-201ENST00000260777 WDR43Q15061 677 aaKnown RBP eCLIP21.22■□□□□ 0.99
SHTN1-201ENST00000260777 HSP90AA1P07900 732 aaKnown RBP21.2■□□□□ 0.99
SHTN1-201ENST00000260777 CHGAP10645 457 aaKnown RBP21.19■□□□□ 0.98
SHTN1-201ENST00000260777 IRX6P78412 446 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms