RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 C5orf42Q9H799 3197 aa4.55□□□□□ -1.68
SSR1-201ENST00000244763 Q1T7F1 81 aa4.55□□□□□ -1.68
SSR1-201ENST00000244763 S4R3F8 94 aa4.54□□□□□ -1.68
SSR1-201ENST00000244763 SPRR1BP22528 89 aa4.54□□□□□ -1.68
SSR1-201ENST00000244763 COL6A5A8TX70 2615 aa4.54□□□□□ -1.68
SSR1-201ENST00000244763 UTRNP46939 3433 aa4.53□□□□□ -1.68
SSR1-201ENST00000244763 OXTP01178 125 aa4.53□□□□□ -1.68
SSR1-201ENST00000244763 CEP350Q5VT06 3117 aa4.52□□□□□ -1.69
SSR1-201ENST00000244763 LCE6AA0A183 80 aa4.52□□□□□ -1.69
SSR1-201ENST00000244763 FP248Q71RG6 208 aaPredicted RBP4.52□□□□□ -1.69
SSR1-201ENST00000244763 DMBT1Q9UGM3 2413 aaPredicted RBP4.51□□□□□ -1.69
SSR1-201ENST00000244763 UTP20O75691 2785 aaKnown RBP4.51□□□□□ -1.69
SSR1-201ENST00000244763 TEX15Q9BXT5 2789 aa4.5□□□□□ -1.69
SSR1-201ENST00000244763 R4GN34 69 aa4.49□□□□□ -1.69
SSR1-201ENST00000244763 MMP24-AS1A0A0U1RRL7 71 aa4.48□□□□□ -1.69
SSR1-201ENST00000244763 Q5VSD8 79 aa4.48□□□□□ -1.69
SSR1-201ENST00000244763 SPINK7P58062 85 aa4.48□□□□□ -1.69
SSR1-201ENST00000244763 Q75L30 129 aa4.48□□□□□ -1.69
SSR1-201ENST00000244763 CHD6Q8TD26 2715 aa4.48□□□□□ -1.69
SSR1-201ENST00000244763 STAB2Q8WWQ8 2551 aa4.47□□□□□ -1.69
SSR1-201ENST00000244763 LINC00472Q9H8W2 130 aa4.47□□□□□ -1.69
SSR1-201ENST00000244763 MAP1AP78559 2803 aaPredicted RBP4.46□□□□□ -1.69
SSR1-201ENST00000244763 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
SSR1-201ENST00000244763 Q5W150 140 aa4.44□□□□□ -1.7
SSR1-201ENST00000244763 Q8N9P0 234 aaPredicted RBP4.41□□□□□ -1.7
SSR1-201ENST00000244763 PLAC4Q8WY50 150 aa4.4□□□□□ -1.7
SSR1-201ENST00000244763 KRTAP10-1P60331 282 aa4.4□□□□□ -1.71
SSR1-201ENST00000244763 KRTAP26-1Q6PEX3 210 aa4.4□□□□□ -1.71
SSR1-201ENST00000244763 KMT2BQ9UMN6 2715 aaPredicted RBP4.39□□□□□ -1.71
SSR1-201ENST00000244763 RPL37P61927 97 aaKnown RBP4.39□□□□□ -1.71
SSR1-201ENST00000244763 RPS29P62273 56 aaKnown RBP4.38□□□□□ -1.71
SSR1-201ENST00000244763 FLNCQ14315 2725 aa4.38□□□□□ -1.71
SSR1-201ENST00000244763 KRTAP1-5Q9BYS1 174 aa4.37□□□□□ -1.71
SSR1-201ENST00000244763 CHD7Q9P2D1 2997 aa4.37□□□□□ -1.71
SSR1-201ENST00000244763 NSD1Q96L73 2696 aaPredicted RBP4.36□□□□□ -1.71
SSR1-201ENST00000244763 TRANK1O15050 2925 aa4.36□□□□□ -1.71
SSR1-201ENST00000244763 KRTAP10-2P60368 255 aa4.36□□□□□ -1.71
SSR1-201ENST00000244763 ITPR2Q14571 2701 aa4.36□□□□□ -1.71
SSR1-201ENST00000244763 Q8NDZ9 215 aa4.36□□□□□ -1.71
SSR1-201ENST00000244763 KRTAP21-3Q3LHN1 58 aa4.35□□□□□ -1.71
SSR1-201ENST00000244763 ASB16-AS1Q495Z4 193 aa4.35□□□□□ -1.71
SSR1-201ENST00000244763 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
SSR1-201ENST00000244763 PCNTO95613 3336 aa4.35□□□□□ -1.71
SSR1-201ENST00000244763 Q6ZR54 194 aa4.35□□□□□ -1.71
SSR1-201ENST00000244763 M0QZ58 72 aa4.34□□□□□ -1.72
SSR1-201ENST00000244763 ROMO1P60602 79 aa4.34□□□□□ -1.72
SSR1-201ENST00000244763 IGSF10Q6WRI0 2623 aa4.33□□□□□ -1.72
SSR1-201ENST00000244763 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
SSR1-201ENST00000244763 CFAP54Q96N23 3096 aa4.32□□□□□ -1.72
SSR1-201ENST00000244763 KRTAP4-16G5E9R7 235 aaPredicted RBP4.31□□□□□ -1.72
SSR1-201ENST00000244763 UBR5O95071 2799 aaPredicted RBP4.3□□□□□ -1.72
SSR1-201ENST00000244763 A0A0C4DFX4 3053 aa4.3□□□□□ -1.72
SSR1-201ENST00000244763 MKI67P46013 3256 aaKnown RBP4.29□□□□□ -1.72
SSR1-201ENST00000244763 Q5VV11 94 aa4.29□□□□□ -1.72
SSR1-201ENST00000244763 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
SSR1-201ENST00000244763 LAMA2P24043 3122 aaKnown RBP4.27□□□□□ -1.73
SSR1-201ENST00000244763 Q5XG85 94 aa4.27□□□□□ -1.73
SSR1-201ENST00000244763 A0A087X002 238 aa4.27□□□□□ -1.73
SSR1-201ENST00000244763 PANO1I0J062 215 aa4.26□□□□□ -1.73
SSR1-201ENST00000244763 MGAQ8IWI9 3026 aa4.26□□□□□ -1.73
SSR1-201ENST00000244763 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
SSR1-201ENST00000244763 DSPP15924 2871 aaKnown RBP4.23□□□□□ -1.73
SSR1-201ENST00000244763 TRIOO75962 3097 aa4.22□□□□□ -1.73
SSR1-201ENST00000244763 HIVEP1P15822 2718 aa4.21□□□□□ -1.73
SSR1-201ENST00000244763 LAMA3Q16787 3333 aa4.21□□□□□ -1.73
SSR1-201ENST00000244763 UNC80Q8N2C7 3258 aa4.21□□□□□ -1.73
SSR1-201ENST00000244763 Q6ZRN7 208 aaPredicted RBP4.21□□□□□ -1.74
SSR1-201ENST00000244763 HTTP42858 3142 aa4.2□□□□□ -1.74
SSR1-201ENST00000244763 NIPBLQ6KC79 2804 aaeCLIP4.2□□□□□ -1.74
SSR1-201ENST00000244763 A8MUU9 505 aa4.2□□□□□ -1.74
SSR1-201ENST00000244763 ITPR1Q14643 2758 aa4.2□□□□□ -1.74
SSR1-201ENST00000244763 WDFY4Q6ZS81 3184 aa4.19□□□□□ -1.74
SSR1-201ENST00000244763 RANBP2P49792 3224 aaKnown RBP4.19□□□□□ -1.74
SSR1-201ENST00000244763 XIRP2A4UGR9 3374 aa4.18□□□□□ -1.74
SSR1-201ENST00000244763 PRUNE2Q8WUY3 3088 aa4.17□□□□□ -1.74
SSR1-201ENST00000244763 CHD9Q3L8U1 2897 aa4.17□□□□□ -1.74
SSR1-201ENST00000244763 SPATA8Q6RVD6 105 aa4.16□□□□□ -1.74
SSR1-201ENST00000244763 NOTCH2NLQ7Z3S9 236 aa4.16□□□□□ -1.74
SSR1-201ENST00000244763 C20orf166-AS1Q96NR2 134 aa4.16□□□□□ -1.74
SSR1-201ENST00000244763 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
SSR1-201ENST00000244763 CYSTM1Q9H1C7 97 aa4.15□□□□□ -1.74
SSR1-201ENST00000244763 VPS13AQ96RL7 3174 aa4.15□□□□□ -1.75
SSR1-201ENST00000244763 CELSR3Q9NYQ7 3312 aa4.14□□□□□ -1.75
SSR1-201ENST00000244763 FRYQ5TBA9 3013 aa4.13□□□□□ -1.75
SSR1-201ENST00000244763 KRTAP13-1Q8IUC0 172 aa4.13□□□□□ -1.75
SSR1-201ENST00000244763 TNP1P09430 55 aa4.12□□□□□ -1.75
SSR1-201ENST00000244763 BRCA2P51587 3418 aa4.11□□□□□ -1.75
SSR1-201ENST00000244763 TENM3Q9P273 2699 aa4.1□□□□□ -1.75
SSR1-201ENST00000244763 KRTAP11-1Q8IUC1 163 aa4.1□□□□□ -1.75
SSR1-201ENST00000244763 KRTAP13-2Q52LG2 175 aa4.09□□□□□ -1.75
SSR1-201ENST00000244763 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
SSR1-201ENST00000244763 NBEAL2Q6ZNJ1 2754 aa4.07□□□□□ -1.76
SSR1-201ENST00000244763 REV3LO60673 3130 aa4.06□□□□□ -1.76
SSR1-201ENST00000244763 KRTAP7-1Q8IUC3 87 aa4.06□□□□□ -1.76
SSR1-201ENST00000244763 APCP25054 2843 aa4.05□□□□□ -1.76
SSR1-201ENST00000244763 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
SSR1-201ENST00000244763 CDH23Q9H251 3354 aa4.04□□□□□ -1.76
SSR1-201ENST00000244763 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
SSR1-201ENST00000244763 FREM2Q5SZK8 3169 aa4.02□□□□□ -1.77
SSR1-201ENST00000244763 COL6A3P12111 3177 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms