RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 TNRC6CQ9HCJ0 1690 aaKnown RBP1.12□□□□□ -2.23
HMGB1P24-202ENST00000615653 LINC01546A6NGU7 62 aa1.11□□□□□ -2.23
HMGB1P24-202ENST00000615653 PRB1P04280 392 aa1.11□□□□□ -2.23
HMGB1P24-202ENST00000615653 COX6B2Q6YFQ2 88 aa1.11□□□□□ -2.23
HMGB1P24-202ENST00000615653 TP53AIP1Q9HCN2 124 aa1.11□□□□□ -2.23
HMGB1P24-202ENST00000615653 MED13LQ71F56 2210 aa1.11□□□□□ -2.23
HMGB1P24-202ENST00000615653 CCL22O00626 93 aa1.1□□□□□ -2.23
HMGB1P24-202ENST00000615653 COX6B1P14854 86 aa1.1□□□□□ -2.23
HMGB1P24-202ENST00000615653 TMEM167BQ9NRX6 74 aa1.1□□□□□ -2.23
HMGB1P24-202ENST00000615653 TIMM8BQ9Y5J9 83 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P24-202ENST00000615653 CACNA1CQ13936 2221 aa1.09□□□□□ -2.24
HMGB1P24-202ENST00000615653 K7EIL1 84 aa1.08□□□□□ -2.24
HMGB1P24-202ENST00000615653 K7EQZ3 153 aa1.08□□□□□ -2.24
HMGB1P24-202ENST00000615653 NDUFA3O95167 84 aa1.08□□□□□ -2.24
HMGB1P24-202ENST00000615653 KRTAP12-1P59990 96 aa1.08□□□□□ -2.24
HMGB1P24-202ENST00000615653 CNFNQ9BYD5 112 aa1.08□□□□□ -2.24
HMGB1P24-202ENST00000615653 BAHCC1Q9P281 2608 aa1.08□□□□□ -2.24
HMGB1P24-202ENST00000615653 F5P12259 2224 aa1.08□□□□□ -2.24
HMGB1P24-202ENST00000615653 KNTC1P50748 2209 aa1.07□□□□□ -2.24
HMGB1P24-202ENST00000615653 ASCC3Q8N3C0 2202 aaKnown RBP1.07□□□□□ -2.24
HMGB1P24-202ENST00000615653 BPTFQ12830 3046 aa1.07□□□□□ -2.24
HMGB1P24-202ENST00000615653 ABCA1O95477 2261 aa1.07□□□□□ -2.24
HMGB1P24-202ENST00000615653 SPINK4O60575 86 aa1.07□□□□□ -2.24
HMGB1P24-202ENST00000615653 CRIP1P50238 77 aa1.07□□□□□ -2.24
HMGB1P24-202ENST00000615653 LINC00158P58513 81 aa1.07□□□□□ -2.24
HMGB1P24-202ENST00000615653 DEFB123Q8N688 67 aa1.07□□□□□ -2.24
HMGB1P24-202ENST00000615653 MRPL34Q9BQ48 92 aaKnown RBP1.07□□□□□ -2.24
HMGB1P24-202ENST00000615653 CDKN2A-AS1Q9UH64 79 aa1.07□□□□□ -2.24
HMGB1P24-202ENST00000615653 TNCP24821 2201 aa1.06□□□□□ -2.24
HMGB1P24-202ENST00000615653 LOC730098B7Z3J9 87 aa1.06□□□□□ -2.24
HMGB1P24-202ENST00000615653 J3QKU1 62 aa1.06□□□□□ -2.24
HMGB1P24-202ENST00000615653 LYNX1P0DP58 116 aa1.06□□□□□ -2.24
HMGB1P24-202ENST00000615653 COX6A2Q02221 97 aa1.06□□□□□ -2.24
HMGB1P24-202ENST00000615653 KRTAP6-3Q3LI67 103 aa1.06□□□□□ -2.24
HMGB1P24-202ENST00000615653 SPINK9Q5DT21 86 aa1.06□□□□□ -2.24
HMGB1P24-202ENST00000615653 LINC01590Q5TEZ4 76 aa1.06□□□□□ -2.24
HMGB1P24-202ENST00000615653 Q8IZM0 81 aa1.06□□□□□ -2.24
HMGB1P24-202ENST00000615653 PRO3102Q9H379 93 aa1.06□□□□□ -2.24
HMGB1P24-202ENST00000615653 CACNA1GO43497 2377 aa1.06□□□□□ -2.24
HMGB1P24-202ENST00000615653 ARHGAP5-AS1Q96IT6 56 aa1.05□□□□□ -2.24
HMGB1P24-202ENST00000615653 TTTY10Q9BZA0 68 aa1.05□□□□□ -2.24
HMGB1P24-202ENST00000615653 CADP27708 2225 aa1.04□□□□□ -2.24
HMGB1P24-202ENST00000615653 USF3Q68DE3 2245 aa1.04□□□□□ -2.24
HMGB1P24-202ENST00000615653 LYNX1G3V0Z9 82 aa1.04□□□□□ -2.24
HMGB1P24-202ENST00000615653 TFF3Q07654 80 aa1.04□□□□□ -2.24
HMGB1P24-202ENST00000615653 PRO0255Q9UI72 69 aa1.04□□□□□ -2.24
HMGB1P24-202ENST00000615653 PDE4DIPQ5VU43 2346 aa1.04□□□□□ -2.24
HMGB1P24-202ENST00000615653 CACNA1BQ00975 2339 aa1.03□□□□□ -2.24
HMGB1P24-202ENST00000615653 I3L2K1 104 aa1.03□□□□□ -2.24
HMGB1P24-202ENST00000615653 IAPPP10997 89 aa1.03□□□□□ -2.24
HMGB1P24-202ENST00000615653 LINC00308Q8TCZ7 52 aa1.03□□□□□ -2.24
HMGB1P24-202ENST00000615653 TECTAO75443 2155 aa1.03□□□□□ -2.25
HMGB1P24-202ENST00000615653 MUC6Q6W4X9 2439 aa1.03□□□□□ -2.25
HMGB1P24-202ENST00000615653 H3BSH0 61 aa1.02□□□□□ -2.25
HMGB1P24-202ENST00000615653 URB1O60287 2271 aaKnown RBP1.02□□□□□ -2.25
HMGB1P24-202ENST00000615653 MINOS1Q5TGZ0 78 aa1.02□□□□□ -2.25
HMGB1P24-202ENST00000615653 ANKRD17O75179 2603 aaKnown RBP1.02□□□□□ -2.25
HMGB1P24-202ENST00000615653 DEFB106AQ8N104 65 aa1.01□□□□□ -2.25
HMGB1P24-202ENST00000615653 SMIM2Q9BVW6 85 aa1.01□□□□□ -2.25
HMGB1P24-202ENST00000615653 C10orf95Q9H7T3 257 aa1.01□□□□□ -2.25
HMGB1P24-202ENST00000615653 C6orf48Q9UBA6 75 aa1.01□□□□□ -2.25
HMGB1P24-202ENST00000615653 PTPRQQ9UMZ3 2332 aa1.01□□□□□ -2.25
HMGB1P24-202ENST00000615653 SORL1Q92673 2214 aa1.01□□□□□ -2.25
HMGB1P24-202ENST00000615653 ASXL3Q9C0F0 2248 aa1.01□□□□□ -2.25
HMGB1P24-202ENST00000615653 RPS27P42677 84 aaKnown RBP1□□□□□ -2.25
HMGB1P24-202ENST00000615653 KRTAP21-3Q3LHN1 58 aa1□□□□□ -2.25
HMGB1P24-202ENST00000615653 AHCTF1Q8WYP5 2266 aa1□□□□□ -2.25
HMGB1P24-202ENST00000615653 Q6ZSA8 131 aa0.99□□□□□ -2.25
HMGB1P24-202ENST00000615653 APLNQ9ULZ1 77 aa0.99□□□□□ -2.25
HMGB1P24-202ENST00000615653 FLG2Q5D862 2391 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P24-202ENST00000615653 DOPEY2Q9Y3R5 2298 aa0.98□□□□□ -2.25
HMGB1P24-202ENST00000615653 Q5VSD8 79 aa0.98□□□□□ -2.25
HMGB1P24-202ENST00000615653 ALMS1Q8TCU4 4167 aa0.98□□□□□ -2.25
HMGB1P24-202ENST00000615653 CNTRLQ7Z7A1 2325 aa0.98□□□□□ -2.25
HMGB1P24-202ENST00000615653 NDUFA1O15239 70 aa0.97□□□□□ -2.25
HMGB1P24-202ENST00000615653 SPRR1AP35321 89 aa0.97□□□□□ -2.25
HMGB1P24-202ENST00000615653 DEFB105AQ8NG35 78 aa0.97□□□□□ -2.25
HMGB1P24-202ENST00000615653 NAV3Q8IVL0 2385 aa0.97□□□□□ -2.25
HMGB1P24-202ENST00000615653 H1FX-AS1Q4G0G2 97 aa0.96□□□□□ -2.26
HMGB1P24-202ENST00000615653 WFDC13Q8IUB5 93 aa0.96□□□□□ -2.26
HMGB1P24-202ENST00000615653 FAM208BQ5VWN6 2430 aa0.96□□□□□ -2.26
HMGB1P24-202ENST00000615653 ZDBF2Q9HCK1 2354 aa0.96□□□□□ -2.26
HMGB1P24-202ENST00000615653 CACNA1EQ15878 2313 aa0.95□□□□□ -2.26
HMGB1P24-202ENST00000615653 H0YAA0 97 aa0.95□□□□□ -2.26
HMGB1P24-202ENST00000615653 H3BUA1 57 aa0.95□□□□□ -2.26
HMGB1P24-202ENST00000615653 POLR2KP53803 58 aaKnown RBP0.95□□□□□ -2.26
HMGB1P24-202ENST00000615653 PRB3Q04118 309 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P24-202ENST00000615653 KNL1Q8NG31 2342 aa0.95□□□□□ -2.26
HMGB1P24-202ENST00000615653 PLCE1Q9P212 2302 aa0.95□□□□□ -2.26
HMGB1P24-202ENST00000615653 JMJD1CQ15652 2540 aa0.94□□□□□ -2.26
HMGB1P24-202ENST00000615653 A0A0C4DFX4 3053 aa0.94□□□□□ -2.26
HMGB1P24-202ENST00000615653 SPRR1BP22528 89 aa0.94□□□□□ -2.26
HMGB1P24-202ENST00000615653 PRCDQ00LT1 54 aa0.94□□□□□ -2.26
HMGB1P24-202ENST00000615653 COL6A3P12111 3177 aa0.94□□□□□ -2.26
HMGB1P24-202ENST00000615653 A0A0D9SG42 100 aa0.93□□□□□ -2.26
HMGB1P24-202ENST00000615653 DEFB130BP0DP73 79 aa0.93□□□□□ -2.26
HMGB1P24-202ENST00000615653 DEFB130AP0DP74 79 aa0.93□□□□□ -2.26
HMGB1P24-202ENST00000615653 RPL39P62891 51 aaKnown RBP0.93□□□□□ -2.26
HMGB1P24-202ENST00000615653 RPL39LQ96EH5 51 aaKnown RBP0.93□□□□□ -2.26
HMGB1P24-202ENST00000615653 WFDC10BQ8IUB3 73 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms